Cla97C05G094620 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G094620
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Unknown protein
Location	Cla97Chr05 : 17261752 .. 17262191 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGATTTCTAGTATATTCATTGCTTTTGCAACAGTTCCTATAACTATCACTTGTTCAAATATAAAATTTCAACTTGTAGATAGGGAGGTAACTCTCACTACTCAGGTATTTTTCTTTCACGAAGGTTAAGTGATTGGTAAATTACGAGGGTTGTTTCTTATGAGGGTTTTCTTATTGTTTTGCAGAAAGGGGAATGCATTATTGGAGGTGTTGCAAAAGGAGAGAAGATTGAAGTTCCAATCTTATTCTACCCAGTTGAATTCTTCTCCAAGATTGATTCAGAAAGAATGTGGTTGTTCCTGTCACAGAGCGATCCCAGCAGTGCAATATTAATTGCTCCAATGGGATTGAATGCTGAGATCAGAATCAATTTTCCCCATCCTTTCTTTACAGTGTTTCAATGGAAGGTTGTAACTTTGCATATTACAAATAGTTAG

mRNA sequence

ATGTTGATTTCTAGTATATTCATTGCTTTTGCAACAGTTCCTATAACTATCACTTGTTCAAATATAAAATTTCAACTTGTAGATAGGGAGGTAACTCTCACTACTCAGAAAGGGGAATGCATTATTGGAGGTGTTGCAAAAGGAGAGAAGATTGAAGTTCCAATCTTATTCTACCCAGTTGAATTCTTCTCCAAGATTGATTCAGAAAGAATGTGGTTGTTCCTGTCACAGAGCGATCCCAGCAGTGCAATATTAATTGCTCCAATGGGATTGAATGCTGAGATCAGAATCAATTTTCCCCATCCTTTCTTTACAGTGTTTCAATGGAAGGTTGTAACTTTGCATATTACAAATAGTTAG

Coding sequence (CDS)

ATGTTGATTTCTAGTATATTCATTGCTTTTGCAACAGTTCCTATAACTATCACTTGTTCAAATATAAAATTTCAACTTGTAGATAGGGAGGTAACTCTCACTACTCAGAAAGGGGAATGCATTATTGGAGGTGTTGCAAAAGGAGAGAAGATTGAAGTTCCAATCTTATTCTACCCAGTTGAATTCTTCTCCAAGATTGATTCAGAAAGAATGTGGTTGTTCCTGTCACAGAGCGATCCCAGCAGTGCAATATTAATTGCTCCAATGGGATTGAATGCTGAGATCAGAATCAATTTTCCCCATCCTTTCTTTACAGTGTTTCAATGGAAGGTTGTAACTTTGCATATTACAAATAGTTAG

Protein sequence

MLISSIFIAFATVPITITCSNIKFQLVDREVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSERMWLFLSQSDPSSAILIAPMGLNAEIRINFPHPFFTVFQWKVVTLHITNS

Homology

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BLAST of Cla97C05G094620 vs. NCBI nr
Match: XP_023513336.1 (uncharacterized protein LOC111777844 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 88.2 bits (217), Expect = 2.1e-14
Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 15  ITITCSNIKFQLVDREVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSERMWLF 74
           +TIT S IKF + D EV LTTQ+ ECIIGG A GE+ E  +   P EFF    SER+WLF
Sbjct: 160 LTITDSQIKFLVEDVEVVLTTQRNECIIGGFAAGEEFESAMCLCPWEFFYNFTSERLWLF 219

Query: 75  LSQSDPSSAILIAPMGLNAEIRINFPHPFF 105
            S  DP    LIAPMGL   I   FP  F+
Sbjct: 220 KSY-DPKGMTLIAPMGLYVHISSYFPEDFY 248

[Close]

BLAST of Cla97C05G094620 vs. NCBI nr
Match: XP_022928046.1 (uncharacterized protein LOC111434948 [Cucurbita moschata])

HSP 1 Score: 86.3 bits (212), Expect = 7.8e-14
Identity = 47/90 (52.22%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 15  ITITCSNIKFQLVDREVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSERMWLF 74
           +TIT S IKF + D EV LTTQ+ ECIIGG A G++ E  +   P EFF    SER+WLF
Sbjct: 160 LTITNSQIKFLVEDVEVVLTTQRKECIIGGFAAGDEFESAMCLCPWEFFYNFTSERLWLF 219

Query: 75  LSQSDPSSAILIAPMGLNAEIRINFPHPFF 105
            S  DP    LIAPMGL   I   FP  F+
Sbjct: 220 KSY-DPKGMTLIAPMGLYVHISSYFPEDFY 248

[Close]

BLAST of Cla97C05G094620 vs. NCBI nr
Match: XP_022971718.1 (uncharacterized protein LOC111470385 [Cucurbita maxima])

HSP 1 Score: 85.1 bits (209), Expect = 1.7e-13
Identity = 46/90 (51.11%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 15  ITITCSNIKFQLVDREVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSERMWLF 74
           +TIT S IK  + D EV LTTQ+ ECIIGG A G++ E  +   P EFF    SER+WLF
Sbjct: 160 LTITNSQIKLWVEDLEVVLTTQRNECIIGGFAAGDEFESAMCLCPWEFFYNFTSERLWLF 219

Query: 75  LSQSDPSSAILIAPMGLNAEIRINFPHPFF 105
            S  DP    LIAPMGL   I   FP  F+
Sbjct: 220 KSY-DPKGMTLIAPMGLYVHISSYFPEDFY 248

[Close]

BLAST of Cla97C05G094620 vs. NCBI nr
Match: XP_008457793.2 (PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12
Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 11  ATVPITITCSNIKF-QLVDR-EVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDS 70
           A VP+TIT S IKF  L+D  E + TT++GECIIGG+ +G++I+  I  YP++F+    S
Sbjct: 233 AYVPVTITSSRIKFVALIDHWETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTS 292

Query: 71  ERMWLFLSQSDPSSAILIAPMGLNAEIRINFP 101
           +R+W F S  D +  +LIAPMG+   I   FP
Sbjct: 293 KRVW-FFSSCDTNGLLLIAPMGVYTHISSFFP 323

[Close]

BLAST of Cla97C05G094620 vs. NCBI nr
Match: KGN62033.1 (hypothetical protein Csa_2G287150 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 13  VPITITCSNIKFQL-VDR-EVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSER 72
           V +TIT S IKF   VD  E + TTQ+G+CIIGG+ +GE+I+  I  YP+EF+    S+R
Sbjct: 40  VRVTITSSQIKFVAPVDHWETSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKR 99

Query: 73  MWLFLSQSDPSSAILIAPMGLNAEIRINFP 101
           +W F S  D +  +LIAPMG+   I   FP
Sbjct: 100 VW-FFSSCDTNGLLLIAPMGVYTHISSFFP 128

[Close]

BLAST of Cla97C05G094620 vs. TrEMBL
Match: tr|A0A1S3C6G9|A0A1S3C6G9_CUCME (uncharacterized protein LOC103497397 OS=Cucumis melo OX=3656 GN=LOC103497397 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-12
Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 0


Query: 11  ATVPITITCSNIKF-QLVDR-EVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDS 70
           A VP+TIT S IKF  L+D  E + TT++GECIIGG+ +G++I+  I  YP++F+    S
Sbjct: 233 AYVPVTITSSRIKFVALIDHWETSFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTS 292

Query: 71  ERMWLFLSQSDPSSAILIAPMGLNAEIRINFP 101
           +R+W F S  D +  +LIAPMG+   I   FP
Sbjct: 293 KRVW-FFSSCDTNGLLLIAPMGVYTHISSFFP 323

[Close]

BLAST of Cla97C05G094620 vs. TrEMBL
Match: tr|A0A0A0LJU4|A0A0A0LJU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287150 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-11
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 0


Query: 13  VPITITCSNIKFQL-VDR-EVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSER 72
           V +TIT S IKF   VD  E + TTQ+G+CIIGG+ +GE+I+  I  YP+EF+    S+R
Sbjct: 40  VRVTITSSQIKFVAPVDHWETSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKR 99

Query: 73  MWLFLSQSDPSSAILIAPMGLNAEIRINFP 101
           +W F S  D +  +LIAPMG+   I   FP
Sbjct: 100 VW-FFSSCDTNGLLLIAPMGVYTHISSFFP 128

[Close]

BLAST of Cla97C05G094620 vs. TrEMBL
Match: tr|A0A0A0LMQ7|A0A0A0LMQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287140 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-11
Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 13  VPITITCSNIKFQL-VDREVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSERM 72
           VPITI  S I F +  D E + T ++GECIIGG+ +G++I   I FYP+EF+    S+R+
Sbjct: 40  VPITIRSSQINFVVDHDWETSFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRV 99

Query: 73  WLFLSQSDPSSAILIAPMGLNAEIRINFP 101
           W F S  D +  +LIAPMG+   I   FP
Sbjct: 100 W-FFSSCDTNGLLLIAPMGVYTHISSFFP 127

[Close]

BLAST of Cla97C05G094620 vs. TrEMBL
Match: tr|A0A0A0LQ10|A0A0A0LQ10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287180 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.1e-11
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 30  EVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSERMWLFLSQSDPSSAILIAPM 89
           EV LTT++GECIIGG  +G++I+  I  YP+EF+    S+ +WL  +  DP+  +LIAPM
Sbjct: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61

Query: 90  GLNAEIRINFPHPFFTVFQWKVVTLHITN 119
           GL   I    PH  +       + LHI N
Sbjct: 62  GLYTHISSFSPHDIY-----GGIDLHIVN 85

[Close]

BLAST of Cla97C05G094620 vs. TrEMBL
Match: tr|A0A1S4E1P6|A0A1S4E1P6_CUCME (uncharacterized protein LOC103497437 OS=Cucumis melo OX=3656 GN=LOC103497437 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.5e-09
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 13  VPITITCSNIKFQLVDREVTLTTQKGECIIGGVAKGEKIEVPILFYPVEFFSKIDSERMW 72
           VP  +T S  KF L D+E+  T ++  CIIGG+ +GE+    +   P+E +    S+R+W
Sbjct: 160 VPFRVTISEFKFFLPDKEIIFTNERDGCIIGGIREGEEWRGAMCLNPIEGYFNFTSKRLW 219

Query: 73  LFLSQSDPSSAILIAPMGLNAEIRINFP 101
           LF S  DP    L+AP GL   I   FP
Sbjct: 220 LFESY-DPIGVTLVAPFGLYVNISTFFP 246

The following BLAST results are available for this feature:

BLAST of Cla97C05G094620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513336.1	2.1e-14	53.33	uncharacterized protein LOC111777844 [Cucurbita pepo subsp. pepo]	[more]
XP_022928046.1	7.8e-14	52.22	uncharacterized protein LOC111434948 [Cucurbita moschata]	[more]
XP_022971718.1	1.7e-13	51.11	uncharacterized protein LOC111470385 [Cucurbita maxima]	[more]
XP_008457793.2	2.5e-12	46.74	PREDICTED: uncharacterized protein LOC103497397 [Cucumis melo]	[more]
KGN62033.1	2.8e-11	47.78	hypothetical protein Csa_2G287150 [Cucumis sativus]	[more]

BLAST of Cla97C05G094620 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6G9\|A0A1S3C6G9_CUCME	1.7e-12	46.74	uncharacterized protein LOC103497397 OS=Cucumis melo OX=3656 GN=LOC103497397 PE=...	[more]
tr\|A0A0A0LJU4\|A0A0A0LJU4_CUCSA	1.8e-11	47.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287150 PE=4 SV=1	[more]
tr\|A0A0A0LMQ7\|A0A0A0LMQ7_CUCSA	2.4e-11	46.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287140 PE=4 SV=1	[more]
tr\|A0A0A0LQ10\|A0A0A0LQ10_CUCSA	4.1e-11	42.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287180 PE=4 SV=1	[more]
tr\|A0A1S4E1P6\|A0A1S4E1P6_CUCME	6.5e-09	39.77	uncharacterized protein LOC103497437 OS=Cucumis melo OX=3656 GN=LOC103497437 PE=...	[more]

BLAST of Cla97C05G094620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G094620 vs. TAIR10


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G094620.1	Cla97C05G094620.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G094620	Watermelon (97103) v2	wmbwmbB134
Cla97C05G094620	Silver-seed gourd	carwmbB0387
Cla97C05G094620	Silver-seed gourd	carwmbB0459
Cla97C05G094620	Cucumber (Gy14) v2	cgybwmbB062
Cla97C05G094620	Cucumber (Gy14) v2	cgybwmbB208
Cla97C05G094620	Cucumber (Gy14) v1	cgywmbB262
Cla97C05G094620	Cucurbita maxima (Rimu)	cmawmbB123
Cla97C05G094620	Cucurbita maxima (Rimu)	cmawmbB130
Cla97C05G094620	Cucurbita maxima (Rimu)	cmawmbB260
Cla97C05G094620	Cucurbita moschata (Rifu)	cmowmbB114
Cla97C05G094620	Cucurbita moschata (Rifu)	cmowmbB116
Cla97C05G094620	Cucurbita moschata (Rifu)	cmowmbB240
Cla97C05G094620	Wild cucumber (PI 183967)	cpiwmbB065
Cla97C05G094620	Wild cucumber (PI 183967)	cpiwmbB223
Cla97C05G094620	Cucumber (Chinese Long) v3	cucwmbB061
Cla97C05G094620	Cucumber (Chinese Long) v3	cucwmbB219
Cla97C05G094620	Cucumber (Chinese Long) v2	cuwmbB063
Cla97C05G094620	Cucumber (Chinese Long) v2	cuwmbB217
Cla97C05G094620	Bottle gourd (USVL1VR-Ls)	lsiwmbB329
Cla97C05G094620	Bottle gourd (USVL1VR-Ls)	lsiwmbB371
Cla97C05G094620	Melon (DHL92) v3.6.1	medwmbB245
Cla97C05G094620	Melon (DHL92) v3.6.1	medwmbB429
Cla97C05G094620	Melon (DHL92) v3.5.1	mewmbB258
Cla97C05G094620	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G094620	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G094620	Watermelon (Charleston Gray)	wcgwmbB267
Cla97C05G094620	Watermelon (97103) v1	wmwmbB401
Cla97C05G094620	Wax gourd	wgowmbB181