Cla97C05G094420 (gene) Watermelon (97103) v2

NameCla97C05G094420
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 16496909 .. 16497223 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACCACTGCCGTCTGCTTCTGTGTTGCCTTATCTCTGGCCACCTTTTTTGCCTTATCTCCGGTGGCCGTCTCTTCAATATCGGCTTCTCCACCCGTTTCACCTCACAGAACTTATCAAAATATGTCTTCTTTTTTCCCTTCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCGGCATCGGCACCAGGCTCTGGCGAGTTCATGGGGAAGAGTGGGTCAAGTGATGTGAAGCTCAATCATGGGGTCTCAGCTTTTGGTCTGAGCATTTGCAGTTTGTTTAGTTTAAGAGTTTTTCTTAGTGTTTGA

mRNA sequence

ATGGCTACCACTGCCGTCTGCTTCTGTGTTGCCTTATCTCTGGCCACCTTTTTTGCCTTATCTCCGGTGGCCGTCTCTTCAATATCGGCTTCTCCACCCGTTTCACCTCACAGAACTTATCAAAATATGTCTTCTTTTTTCCCTTCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCGGCATCGGCACCAGGCTCTGGCGAGTTCATGGGGAAGAGTGGGTCAAGTGATGTGAAGCTCAATCATGGGGTCTCAGCTTTTGGTCTGAGCATTTGCAGTTTGTTTAGTTTAAGAGTTTTTCTTAGTGTTTGA

Coding sequence (CDS)

ATGGCTACCACTGCCGTCTGCTTCTGTGTTGCCTTATCTCTGGCCACCTTTTTTGCCTTATCTCCGGTGGCCGTCTCTTCAATATCGGCTTCTCCACCCGTTTCACCTCACAGAACTTATCAAAATATGTCTTCTTTTTTCCCTTCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCGGCATCGGCACCAGGCTCTGGCGAGTTCATGGGGAAGAGTGGGTCAAGTGATGTGAAGCTCAATCATGGGGTCTCAGCTTTTGGTCTGAGCATTTGCAGTTTGTTTAGTTTAAGAGTTTTTCTTAGTGTTTGA

Protein sequence

MATTAVCFCVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPSVDEHSSPISADPASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSLFSLRVFLSV
BLAST of Cla97C05G094420 vs. NCBI nr
Match: XP_022983589.1 (uncharacterized protein LOC111482150 [Cucurbita maxima])

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24
Identity = 74/98 (75.51%), Postives = 81/98 (82.65%), Query Frame = 0

Query: 9   CVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPS-VDEHSSPISADPASAPGS 68
           CVALSLAT FALSP AVS+ISASPPV PHR  QNMSSFFPS VD  SSPISA PA    S
Sbjct: 15  CVALSLATLFALSPSAVSAISASPPVPPHRASQNMSSFFPSPVDGRSSPISAAPALE--S 74

Query: 69  GEFMGK-SGSSDVKLNHGVSAFGLSICSLFSLRVFLSV 105
           GEF+GK SGS+ VKLNHG+SAFGLSICS+F LR+ L+V
Sbjct: 75  GEFIGKRSGSNSVKLNHGISAFGLSICSVFGLRLVLNV 110

BLAST of Cla97C05G094420 vs. NCBI nr
Match: XP_022934640.1 (uncharacterized protein LOC111441775 [Cucurbita moschata])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 71/109 (65.14%), Postives = 77/109 (70.64%), Query Frame = 0

Query: 1   MATTAVC-FCVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPS-VDEHSSPIS 60
           MAT A   FCVALSLA              ASPPV PHR  QNMSSFFPS VD  SSPIS
Sbjct: 1   MATAAAAFFCVALSLAXXXXXXXXXXXXXXASPPVPPHRASQNMSSFFPSPVDGRSSPIS 60

Query: 61  ADPASAPG--SGEFMGK-SGSSDVKLNHGVSAFGLSICSLFSLRVFLSV 105
           A PA A    SGEF+GK SGS+ VKLNHG+SAFGLSICS+FSLR+FL+V
Sbjct: 61  AAPAPATALESGEFIGKRSGSNSVKLNHGISAFGLSICSVFSLRLFLNV 109

BLAST of Cla97C05G094420 vs. NCBI nr
Match: XP_021660805.1 (uncharacterized protein LOC110650233 [Hevea brasiliensis])

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-06
Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 0

Query: 11  ALSLATFFALSPVAVSS---ISASPPVSPHRTYQNMSSFFPSVDEHSSPISADP------ 70
           A+S+   F+   +A+SS   I+ASP V P+ T  +MSSFFP+  +   P SADP      
Sbjct: 16  AMSVVILFSNVLLALSSDPMITASPAVLPYVTAPDMSSFFPTPTDQWPPSSADPPIPEEL 75

Query: 71  ASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSLF 97
           A  P SGEF+GKS SS  KLN   +  G+ IC +F
Sbjct: 76  APVPSSGEFIGKSSSSSAKLNSHSTVVGIGICIIF 110

BLAST of Cla97C05G094420 vs. NCBI nr
Match: XP_012067336.1 (uncharacterized protein LOC105630199 [Jatropha curcas])

HSP 1 Score: 57.4 bits (137), Expect = 3.4e-05
Identity = 46/99 (46.46%), Postives = 57/99 (57.58%), Query Frame = 0

Query: 6   VCFCVALSLATFFALSPVAVSSISASPPVSPHRTYQNMSSFFPSVDEHSSPISADP---- 65
           + F  ALSLA+     PV    I+ASP V P+ T  NMSSFFPS  E     SADP    
Sbjct: 20  ILFSNALSLAS----EPV----ITASPAVLPYVTAPNMSSFFPSPTEEWPLSSADPPEGL 79

Query: 66  ASAPGSGEFMGKSGSSDVKLNHGVSAFGLSICSLFSLRV 101
           A  P SGEF+GK+ S+ VKLN  V+ F   I  +F +R+
Sbjct: 80  APVPSSGEFLGKNSSNSVKLNGYVAVFCFGISVIFVVRI 110

BLAST of Cla97C05G094420 vs. NCBI nr
Match: XP_021642153.1 (uncharacterized protein LOC110636664 [Hevea brasiliensis])

HSP 1 Score: 57.4 bits (137), Expect = 3.4e-05
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 0

Query: 28  ISASPPVSPHRTYQNMSSFFPS-VDEHSSPI-SADPASA------PGSGEFMGKSGSSDV 87
           I+ASP V P+ T  N+SSFFP+  ++   P+ SADP  +      P SGEF+GKS SS  
Sbjct: 40  IAASPAVLPYVTAPNISSFFPTPTNDTQWPLSSADPPRSEALEPVPNSGEFIGKSSSSSP 99

Query: 88  KLNHGVSAFGLSICSLFSLR 100
           KLN  +S FG+ IC +F +R
Sbjct: 100 KLNGHISLFGVGICIIFVIR 119

BLAST of Cla97C05G094420 vs. TrEMBL
Match: tr|A0A2N9I0C8|A0A2N9I0C8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46014 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-04
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 0

Query: 9   CVALSLATFFAL----SPVAVSSISASPPVSPHRTYQNMSSFF--PSVDEHSSPISADPA 68
           C ALS+   FA+    S  +  +ISASP VSP+ T  NMSSFF  PSV    S  +A  +
Sbjct: 8   CAALSIVICFAILYAPSSTSEPTISASPAVSPYVTAPNMSSFFNSPSVQRPLSSAAAPHS 67

Query: 69  SA----PGSGEFMGKSGSSDVKLNHGVSAFGLSICSLFSLRV 101
            A    P SGEF+G+S S+  + + G++ FG+ +  LF  R+
Sbjct: 68  EAITPVPRSGEFVGRSSSNSARSDLGITIFGVGLVCLFVTRL 109

BLAST of Cla97C05G094420 vs. TrEMBL
Match: tr|F6H437|F6H437_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g01230 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.2e-04
Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 0

Query: 30  ASPPVSPH-RTYQNMSSFFPSVDEHSSPISADP---ASAPGSGEFMGKSGSSDVKLNHGV 89
           +SP V P+  +  N+SSFFPS    SS  S +    A  P SGEF+GKS SS V+ N GV
Sbjct: 482 SSPAVLPYVGSPPNISSFFPSTRPSSSAASPNAGAFAPVPYSGEFVGKSCSSSVEFNTGV 541

Query: 90  SAFGLSICSLFSLRV 101
           + FGL  C LF +R+
Sbjct: 542 AVFGLGFCFLFVMRL 556

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022983589.12.5e-2475.51uncharacterized protein LOC111482150 [Cucurbita maxima][more]
XP_022934640.11.9e-1965.14uncharacterized protein LOC111441775 [Cucurbita moschata][more]
XP_021660805.16.8e-0644.21uncharacterized protein LOC110650233 [Hevea brasiliensis][more]
XP_012067336.13.4e-0546.46uncharacterized protein LOC105630199 [Jatropha curcas][more]
XP_021642153.13.4e-0547.50uncharacterized protein LOC110636664 [Hevea brasiliensis][more]
Match NameE-valueIdentityDescription
tr|A0A2N9I0C8|A0A2N9I0C8_FAGSY1.5e-0441.18Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46014 PE=4 SV=1[more]
tr|F6H437|F6H437_VITVI4.2e-0448.00Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g01230 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G094420.1Cla97C05G094420.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..76

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G094420CmaCh14G007580Cucurbita maxima (Rimu)cmawmbB264
The following gene(s) are paralogous to this gene:

None