Cla97C05G093020 (gene) Watermelon (97103) v2

Overview
NameCla97C05G093020
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 11485110 .. 11485637 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATTCAAAGGAAACTGAATTTCAACATCGCATGGGGAATCAACCTCAGTTTCTTCCGTCTTCTTCCTCTAAACCTATTGGCTATCTTTCTGCATTTGGTACTTTCTCTCTCTGGAATTCAATTTCTCTTTTCCCTCACCCCTTTTTTTCGCCGATTTTTGGATGTTTTCTTCTGTCGATTGAACAACTGGACTTCATCGGTTTCATTTTCCTTGCTGAAATCTGCAAGAACTTTGACAGAGAGAGAGAGAGAGAGAGAGTTGCACGTACCAATTAACCCCCCCAAAAAATACCAAATCCAATACCCAACTCAGGGATATCTCTCCATTTATTGCGTTTGTTTTGGTGTTGATTTGGTATCCTTATTTGGAAATTTTGGACTCAACCCTCTCTGGATGCTATGCATTCTATTTATCCCGTCTGTGATTTTCAATGTTGTGTACAAACCAGTACAGGCTGCGGGAATAAAAGTTCTAGCGGCTCCCGTTTTTGGGAATTTCAAGGGAAGAAAAGAGAAGTTATAG

mRNA sequence

ATGATGATTCAAAGGAAACTGAATTTCAACATCGCATGGGGAATCAACCTCAGTTTCTTCCGTCTTCTTCCTCTAAACCTATTGGCTATCTTTCTGCATTTGGTACTTTCTCTCTCTGGAATTCAATTTCTCTTTTCCCTCACCCCTTTTTTTCGCCGATTTTTGGATGTTTTCTTCTGTCGATTGAACAACTGGACTTCATCGGTTTCATTTTCCTTGCTGAAATCTGCAAGAACTTTGACAGAGAGAGAGAGAGAGAGAGAGTTGCACGTACCAATTAACCCCCCCAAAAAATACCAAATCCAATACCCAACTCAGGGATATCTCTCCATTTATTGCGTTTGTTTTGGTGTTGATTTGGTATCCTTATTTGGAAATTTTGGACTCAACCCTCTCTGGATGCTATGCATTCTATTTATCCCGTCTGTGATTTTCAATGTTGTGTACAAACCAGTACAGGCTGCGGGAATAAAAGTTCTAGCGGCTCCCGTTTTTGGGAATTTCAAGGGAAGAAAAGAGAAGTTATAG

Coding sequence (CDS)

ATGATGATTCAAAGGAAACTGAATTTCAACATCGCATGGGGAATCAACCTCAGTTTCTTCCGTCTTCTTCCTCTAAACCTATTGGCTATCTTTCTGCATTTGGTACTTTCTCTCTCTGGAATTCAATTTCTCTTTTCCCTCACCCCTTTTTTTCGCCGATTTTTGGATGTTTTCTTCTGTCGATTGAACAACTGGACTTCATCGGTTTCATTTTCCTTGCTGAAATCTGCAAGAACTTTGACAGAGAGAGAGAGAGAGAGAGAGTTGCACGTACCAATTAACCCCCCCAAAAAATACCAAATCCAATACCCAACTCAGGGATATCTCTCCATTTATTGCGTTTGTTTTGGTGTTGATTTGGTATCCTTATTTGGAAATTTTGGACTCAACCCTCTCTGGATGCTATGCATTCTATTTATCCCGTCTGTGATTTTCAATGTTGTGTACAAACCAGTACAGGCTGCGGGAATAAAAGTTCTAGCGGCTCCCGTTTTTGGGAATTTCAAGGGAAGAAAAGAGAAGTTATAG

Protein sequence

MMIQRKLNFNIAWGINLSFFRLLPLNLLAIFLHLVLSLSGIQFLFSLTPFFRRFLDVFFCRLNNWTSSVSFSLLKSARTLTERERERELHVPINPPKKYQIQYPTQGYLSIYCVCFGVDLVSLFGNFGLNPLWMLCILFIPSVIFNVVYKPVQAAGIKVLAAPVFGNFKGRKEKL
Homology
[Close]
BLAST of Cla97C05G093020 vs. NCBI nr
Match: XP_022984101.1 (homeobox-leucine zipper protein HDG11-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 134 MLCILFIPSVIFNVVYKPVQAAGIKVLAAPVFGNFK 170
           MLCILFI SVIFNVVYK VQAA +KV AAPV GNFK
Sbjct: 1   MLCILFILSVIFNVVYKRVQAALLKVFAAPVCGNFK 36

[Close]
BLAST of Cla97C05G093020 vs. NCBI nr
Match: XP_022984103.1 (homeobox-leucine zipper protein HDG11-like isoform X4 [Cucurbita maxima])

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 134 MLCILFIPSVIFNVVYKPVQAAGIKVLAAPVFGNFK 170
           MLCILFI SVIFNVVYK VQAA +KV AAPV GNFK
Sbjct: 1   MLCILFILSVIFNVVYKRVQAALLKVFAAPVCGNFK 36

[Close]
BLAST of Cla97C05G093020 vs. NCBI nr
Match: XP_022984098.1 (homeobox-leucine zipper protein HDG11-like isoform X1 [Cucurbita maxima] >XP_022984099.1 homeobox-leucine zipper protein HDG11-like isoform X1 [Cucurbita maxima] >XP_022984100.1 homeobox-leucine zipper protein HDG11-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 134 MLCILFIPSVIFNVVYKPVQAAGIKVLAAPVFGNFK 170
           MLCILFI SVIFNVVYK VQAA +KV AAPV GNFK
Sbjct: 1   MLCILFILSVIFNVVYKRVQAALLKVFAAPVCGNFK 36

The following BLAST results are available for this feature:
BLAST of Cla97C05G093020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022984101.11.3e-0483.33homeobox-leucine zipper protein HDG11-like isoform X2 [Cucurbita maxima][more]
XP_022984103.11.3e-0483.33homeobox-leucine zipper protein HDG11-like isoform X4 [Cucurbita maxima][more]
XP_022984098.11.3e-0483.33homeobox-leucine zipper protein HDG11-like isoform X1 [Cucurbita maxima] >XP_022... [more]
BLAST of Cla97C05G093020 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Cla97C05G093020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G093020 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G093020.1Cla97C05G093020.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G093020Watermelon (97103) v2wmbwmbB101
Cla97C05G093020Silver-seed gourdcarwmbB0181
Cla97C05G093020Silver-seed gourdcarwmbB0795
Cla97C05G093020Cucumber (Gy14) v2cgybwmbB206
Cla97C05G093020Cucumber (Gy14) v1cgywmbB148
Cla97C05G093020Cucumber (Gy14) v1cgywmbB396
Cla97C05G093020Cucurbita maxima (Rimu)cmawmbB264
Cla97C05G093020Cucurbita maxima (Rimu)cmawmbB473
Cla97C05G093020Cucurbita moschata (Rifu)cmowmbB244
Cla97C05G093020Cucurbita moschata (Rifu)cmowmbB454
Cla97C05G093020Wild cucumber (PI 183967)cpiwmbB221
Cla97C05G093020Wild cucumber (PI 183967)cpiwmbB567
Cla97C05G093020Cucumber (Chinese Long) v3cucwmbB217
Cla97C05G093020Cucumber (Chinese Long) v3cucwmbB562
Cla97C05G093020Cucumber (Chinese Long) v2cuwmbB215
Cla97C05G093020Cucumber (Chinese Long) v2cuwmbB541
Cla97C05G093020Bottle gourd (USVL1VR-Ls)lsiwmbB329
Cla97C05G093020Melon (DHL92) v3.6.1medwmbB178
Cla97C05G093020Melon (DHL92) v3.6.1medwmbB424
Cla97C05G093020Melon (DHL92) v3.5.1mewmbB192
Cla97C05G093020Melon (DHL92) v3.5.1mewmbB434
Cla97C05G093020Watermelon (Charleston Gray)wcgwmbB159
Cla97C05G093020Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G093020Watermelon (97103) v1wmwmbB206
Cla97C05G093020Watermelon (97103) v1wmwmbB343
Cla97C05G093020Wax gourdwgowmbB179