Cla97C05G092730 (gene) Watermelon (97103) v2

Overview
NameCla97C05G092730
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionSix-hairpin glycosidase-like protein
LocationCla97Chr05 : 10870193 .. 10871854 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGGCGCTCATCTGGATCTCTATCTCGCTCCCTTCTTTCCTCTCTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCGCCACCTCTCGCTGCTCAACCCCGCCTTCAATCTCGTCGCCTTTCTTTTTCGACTTCGAGGTAATTCACAAGTTTCTAACTTACCTGTTTCGTTTCTGTGCGAAATTAACTGACGAATGAATTTCCAAGCAAGAAATGCAGTTGAATTGCGATGTATTTGATGCTAGATACTTGTTTCTGTTGCCCTGTTGATCTCTGTTTACTATTGATTCCTACTTATGTATAATTTTAAATTATCTGGTTATTGAACTTCAATGTATTTTAGGTTGAATTTTAGCTATTTATGTTTTTCTTCCTTTAATTTCAGATTTTTTTTTAAAACTTTATTATTATTATTATTATTAGGGTTGTTTTACTAAAATATTTATAAATATAATGTCATTTAAAATAATTTCCCATATTATTATCATTCCCTATTTTTTTTAATTAGTTTTACGAAAAAGAGTTACTTGTCAAGTTATTTGTGATTGCATTAAAAAAGAGTTACATAATTCTTGTACACATTATCCCTTACATTCCGACGCAACATTAGACCTAACCATTTTCTGCTTTAAGTCGAAATAATGTTTTAAACCCAACTCATATCACATATAACTTTCCACATGTTAGGTATAGGTTATTGAAACAAAATGTCAGACTGTCAGTTGATGATGTTCATTTTAAATATCCATAAATAACTTGTCACATTGCAGTGGTTACTTTTCACTAATGTCGGGGAGGTCTGGTAAACTGTAATTAATGGATAGAGAAACTGAAGTTTTTAGATTTATGGGAACCAGTTGAAAAGTAATTTAGCCAAACACTTCAAGAACTTACTGAAAGGAGGTATTGTAGAAAGGAGTGTAGTTACGAAAATTTAGAGGTAGAGCCCCAGAGAGAAAAAAGCTAACAAATATGCTCCCCTATTTACTAGATCTTTTTACACTCTTTTAGTCTTTTTGGAACATCTTACTATTTCTTTCCAATCATAAATACCTATAATTACTCGAGAAGCATTATCCCAATTTGAAGCATGAAGAAAAGTCACTTGAGTTTCTGATTTTTGGGTGGCCACACTCCCAAAGAAGGGAGTGGTCACTCACTCTAGCTTCACCCAACTGCCATTGATCATTTTTTGCTTTGGGCCACCCCTTACTCTACCGTTATAGTAGGGGTATGGTGTTCATGACAAGGAAATATCTTGACCATGAGAACCACATGACAATGTAAAGCTTATCCTTAACCTAGAGATTCATCGCCCACTAGTCTCAAATATACCAAAGAAGGAAAAAAAAGAAAAAAAAACGTCATATTTTCTTAGTTTGCCCCTTCCTGAAGAAGAAAATCTCTAAAGGGATTTTATATATCTGTAGCTGCATTTCTTTGGAAACTGAGAGGAATTACGTGACATTTTCCTCCCCGTCTTCTTTGTAGGTTACCTCCCCTTCCAGATTACTCACTAAGTTTTGGCTTTGAGGCAAACTCTCAGTTTTTTCTGGTAGACTCGGCCAATTCTAACATCTGTTTGCAACTACCAGGGGGAAATATTACTTTTATCACCAATTTATATGCTTCTCAAGTTTAA

mRNA sequence

ATGGCTTGGCGCTCATCTGGATCTCTATCTCGCTCCCTTCTTTCCTCTCTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCGCCACCTCTCGCTGCTCAACCCCGCCTTCAATCTCGTCGCCTTTCTTTTTCGACTTCGAGGTTACCTCCCCTTCCAGATTACTCACTAAGTTTTGGCTTTGAGGCAAACTCTCAGTTTTTTCTGGTAGACTCGGCCAATTCTAACATCTGTTTGCAACTACCAGGGGGAAATATTACTTTTATCACCAATTTATATGCTTCTCAAGTTTAA

Coding sequence (CDS)

ATGGCTTGGCGCTCATCTGGATCTCTATCTCGCTCCCTTCTTTCCTCTCTTAGGGCTTCTTCTCTCCGATCGGCTCCTTCTCTTCCTCGCCTCCGCCCGCCACCTCTCGCTGCTCAACCCCGCCTTCAATCTCGTCGCCTTTCTTTTTCGACTTCGAGGTTACCTCCCCTTCCAGATTACTCACTAAGTTTTGGCTTTGAGGCAAACTCTCAGTTTTTTCTGGTAGACTCGGCCAATTCTAACATCTGTTTGCAACTACCAGGGGGAAATATTACTTTTATCACCAATTTATATGCTTCTCAAGTTTAA

Protein sequence

MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSRLPPLPDYSLSFGFEANSQFFLVDSANSNICLQLPGGNITFITNLYASQV
Homology
[Close]
BLAST of Cla97C05G092730 vs. NCBI nr
Match: XP_022983440.1 (uncharacterized protein LOC111482036 isoform X2 [Cucurbita maxima])

HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWR SGSLSRSL+S++RASSLRSAPSLPRLRPPPLAA+PRLQSRRLSFSTSR
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSR 53

[Close]
BLAST of Cla97C05G092730 vs. NCBI nr
Match: XP_022983447.1 (uncharacterized protein LOC111482036 isoform X3 [Cucurbita maxima])

HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWR SGSLSRSL+S++RASSLRSAPSLPRLRPPPLAA+PRLQSRRLSFSTSR
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSR 53

[Close]
BLAST of Cla97C05G092730 vs. NCBI nr
Match: XP_022983431.1 (uncharacterized protein LOC111482036 isoform X1 [Cucurbita maxima])

HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14
Identity = 48/53 (90.57%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWR SGSLSRSL+S++RASSLRSAPSLPRLRPPPLAA+PRLQSRRLSFSTSR
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSR 53

[Close]
BLAST of Cla97C05G092730 vs. NCBI nr
Match: XP_022941571.1 (uncharacterized protein LOC111446884 isoform X4 [Cucurbita moschata] >XP_023512906.1 uncharacterized protein LOC111777483 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-14
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWR SGSLSRSL+S++RASSLRSAPSLPRL PPPLAA+PRLQSRRLSFSTSR
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSR 53

[Close]
BLAST of Cla97C05G092730 vs. NCBI nr
Match: XP_022941567.1 (uncharacterized protein LOC111446884 isoform X1 [Cucurbita moschata] >XP_022941568.1 uncharacterized protein LOC111446884 isoform X2 [Cucurbita moschata])

HSP 1 Score: 86.3 bits (212), Expect = 6.7e-14
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWR SGSLSRSL+S++RASSLRSAPSLPRL PPPLAA+PRLQSRRLSFSTSR
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSR 53

[Close]
BLAST of Cla97C05G092730 vs. TrEMBL
Match: tr|A0A2P5EYL7|A0A2P5EYL7_9ROSA (Caspase-6 protein OS=Trema orientalis OX=63057 GN=TorRG33x02_136760 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-10
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWRS+GSLSRSL+SS R SS RSAPSLPRLRPP LAA PRL SRRLSF++ R
Sbjct: 1  MAWRSAGSLSRSLMSSARVSSQRSAPSLPRLRPPNLAAPPRLHSRRLSFASPR 53

[Close]
BLAST of Cla97C05G092730 vs. TrEMBL
Match: tr|F6H6A0|F6H6A0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0091g00250 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.1e-08
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWR  GSLSRSL+S+ RASSLRS+P+ PR+RPPPLAA PRLQ+RRLSF+  R
Sbjct: 1  MAWR--GSLSRSLMSTARASSLRSSPAAPRVRPPPLAA-PRLQTRRLSFTNPR 50

[Close]
BLAST of Cla97C05G092730 vs. TrEMBL
Match: tr|A0A2C9V4D4|A0A2C9V4D4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G075200 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-07
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWRS GSLSR+L+S+ RA S  S+P LPR+RPPP  A PRLQSRR SF+TSR
Sbjct: 1  MAWRSGGSLSRALISASRAPSRLSSPPLPRIRPPP-TASPRLQSRRPSFATSR 52

[Close]
BLAST of Cla97C05G092730 vs. TrEMBL
Match: tr|A0A2C9V4A5|A0A2C9V4A5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G075200 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-07
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTSR 54
          MAWRS GSLSR+L+S+ RA S  S+P LPR+RPPP  A PRLQSRR SF+TSR
Sbjct: 1  MAWRSGGSLSRALISASRAPSRLSSPPLPRIRPPP-TASPRLQSRRPSFATSR 52

[Close]
BLAST of Cla97C05G092730 vs. TrEMBL
Match: tr|A0A2I4F839|A0A2I4F839_9ROSI (uncharacterized protein LOC108996390 isoform X3 OS=Juglans regia OX=51240 GN=LOC108996390 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.2e-07
Identity = 38/52 (73.08%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1  MAWRSSGSLSRSLLSSLRASSLRSAPSLPRLRPPPLAAQPRLQSRRLSFSTS 53
          MAWR SGSLSRSL+S+ R SSLRS+P LPR+R PPLAA PR+QSRR SF+T+
Sbjct: 1  MAWR-SGSLSRSLISTARTSSLRSSPPLPRVRTPPLAA-PRVQSRRFSFATA 50

The following BLAST results are available for this feature:
BLAST of Cla97C05G092730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022983440.11.8e-1490.57uncharacterized protein LOC111482036 isoform X2 [Cucurbita maxima][more]
XP_022983447.11.8e-1490.57uncharacterized protein LOC111482036 isoform X3 [Cucurbita maxima][more]
XP_022983431.11.8e-1490.57uncharacterized protein LOC111482036 isoform X1 [Cucurbita maxima][more]
XP_022941571.16.7e-1488.68uncharacterized protein LOC111446884 isoform X4 [Cucurbita moschata] >XP_0235129... [more]
XP_022941567.16.7e-1488.68uncharacterized protein LOC111446884 isoform X1 [Cucurbita moschata] >XP_0229415... [more]
BLAST of Cla97C05G092730 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5EYL7|A0A2P5EYL7_9ROSA1.3e-1079.25Caspase-6 protein OS=Trema orientalis OX=63057 GN=TorRG33x02_136760 PE=4 SV=1[more]
tr|F6H6A0|F6H6A0_VITVI8.1e-0873.58Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0091g00250 PE=4 SV=... [more]
tr|A0A2C9V4D4|A0A2C9V4D4_MANES3.1e-0769.81Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G075200 PE=4 SV=... [more]
tr|A0A2C9V4A5|A0A2C9V4A5_MANES3.1e-0769.81Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G075200 PE=4 SV=... [more]
tr|A0A2I4F839|A0A2I4F839_9ROSI5.2e-0773.08uncharacterized protein LOC108996390 isoform X3 OS=Juglans regia OX=51240 GN=LOC... [more]
BLAST of Cla97C05G092730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G092730 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0004560 alpha-L-fucosidase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G092730.1Cla97C05G092730.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..54
NoneNo IPR availablePANTHERPTHR33156:SF7SUBFAMILY NOT NAMEDcoord: 1..53
NoneNo IPR availablePANTHERPTHR33156FAMILY NOT NAMEDcoord: 1..53

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G092730Watermelon (97103) v2wmbwmbB021
Cla97C05G092730Watermelon (97103) v2wmbwmbB101
Cla97C05G092730Silver-seed gourdcarwmbB0304
Cla97C05G092730Silver-seed gourdcarwmbB0396
Cla97C05G092730Cucumber (Gy14) v2cgybwmbB206
Cla97C05G092730Cucumber (Gy14) v1cgywmbB148
Cla97C05G092730Cucumber (Gy14) v1cgywmbB396
Cla97C05G092730Cucurbita maxima (Rimu)cmawmbB347
Cla97C05G092730Cucurbita maxima (Rimu)cmawmbB536
Cla97C05G092730Cucurbita maxima (Rimu)cmawmbB763
Cla97C05G092730Cucurbita moschata (Rifu)cmowmbB332
Cla97C05G092730Cucurbita moschata (Rifu)cmowmbB516
Cla97C05G092730Cucurbita moschata (Rifu)cmowmbB735
Cla97C05G092730Wild cucumber (PI 183967)cpiwmbB221
Cla97C05G092730Wild cucumber (PI 183967)cpiwmbB567
Cla97C05G092730Cucumber (Chinese Long) v3cucwmbB217
Cla97C05G092730Cucumber (Chinese Long) v3cucwmbB562
Cla97C05G092730Cucumber (Chinese Long) v2cuwmbB215
Cla97C05G092730Cucumber (Chinese Long) v2cuwmbB541
Cla97C05G092730Bottle gourd (USVL1VR-Ls)lsiwmbB236
Cla97C05G092730Bottle gourd (USVL1VR-Ls)lsiwmbB329
Cla97C05G092730Melon (DHL92) v3.6.1medwmbB178
Cla97C05G092730Melon (DHL92) v3.6.1medwmbB424
Cla97C05G092730Melon (DHL92) v3.6.1medwmbB543
Cla97C05G092730Melon (DHL92) v3.5.1mewmbB192
Cla97C05G092730Melon (DHL92) v3.5.1mewmbB434
Cla97C05G092730Melon (DHL92) v3.5.1mewmbB549
Cla97C05G092730Watermelon (Charleston Gray)wcgwmbB159
Cla97C05G092730Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G092730Watermelon (97103) v1wmwmbB206
Cla97C05G092730Watermelon (97103) v1wmwmbB343
Cla97C05G092730Wax gourdwgowmbB179
Cla97C05G092730Wax gourdwgowmbB258