Cla97C05G090880 (gene) Watermelon (97103) v2

Overview
NameCla97C05G090880
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptioncation/H(+) antiporter 10-like
LocationCla97Chr05 : 8899868 .. 8900508 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGTCAAATCGAACGACAACGACGTTAAATCATGCGACAGAAATTTGTTTACATGTTCCATTTCTTATAAACTCAAAAGGTTTATGGGGAAATTACAATGATCCTGAAACTTGGCTTCAAAATTCTTTGCCTCGTTTGGAGTTACAGTTGGTTTTGTTCTGTTTTTCCATGGCAATTCTTCGTTTTCTTCTCAAAGGTTTTGGGATCTCCAAGATTTCCTCTCAAATTCTTGTAAGTACACATTTTTCCCAATCATTTGCATTTTCTCTCTTTGGATTTAATTTCCTTTGCCTTTTCAGAAATTAAACAAGTCTTTTAATTGTGTTTTTATGACTTTTGATTGTGTATATAATTATGTTTAGTTCAAGTCAATGAAAAGTATGTAATTATTACATGAATGCACTGTTTTTTTTAGTGGTGGAGTTTGACGTTTTCAAAATGATAATTGCATCTTATCCACTAAGCTATATTCGTAAATTTGTGTATAATTTATCTATAATTATAAATTTGATCCGGTGTCTATTTAACTGTTTTACTTAAATATGAAAATCTGAGTTTCTTTAATCTCTATACTTCAGTGGGAACAAACTTTATTTCAAGTAACATTTATCAATTCAAAATTTGACCACAAATTATGA

mRNA sequence

ATGCAGTCAAATCGAACGACAACGACGTTAAATCATGCGACAGAAATTTGTTTACATGTTCCATTTCTTATAAACTCAAAAGGTTTATGGGGAAATTACAATGATCCTGAAACTTGGCTTCAAAATTCTTTGCCTCGTTTGGAGTTACAGTTGGTTTTGTTCTGTTTTTCCATGGCAATTCTTCGTTTTCTTCTCAAAGGTTTTGGGATCTCCAAGATTTCCTCTCAAATTCTTTGGGAACAAACTTTATTTCAAGTAACATTTATCAATTCAAAATTTGACCACAAATTATGA

Coding sequence (CDS)

ATGCAGTCAAATCGAACGACAACGACGTTAAATCATGCGACAGAAATTTGTTTACATGTTCCATTTCTTATAAACTCAAAAGGTTTATGGGGAAATTACAATGATCCTGAAACTTGGCTTCAAAATTCTTTGCCTCGTTTGGAGTTACAGTTGGTTTTGTTCTGTTTTTCCATGGCAATTCTTCGTTTTCTTCTCAAAGGTTTTGGGATCTCCAAGATTTCCTCTCAAATTCTTTGGGAACAAACTTTATTTCAAGTAACATTTATCAATTCAAAATTTGACCACAAATTATGA

Protein sequence

MQSNRTTTTLNHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGISKISSQILWEQTLFQVTFINSKFDHKL
Homology
[Close]
BLAST of Cla97C05G090880 vs. NCBI nr
Match: XP_016899409.1 (PREDICTED: cation/H(+) antiporter 4-like [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 8.3e-14
Identity = 44/77 (57.14%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 2  QSNRTTTTLNHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAIL 61
          Q   + +  N  T  C   P  +NS GLW N N  E WL NSLP LELQLVLFCF MAI+
Sbjct: 5  QGMESNSEFNLTTVTCTFHPPFVNSDGLWTNINRHEWWLNNSLPLLELQLVLFCFFMAII 64

Query: 62 RFLLKGFGISKISSQIL 79
           FLLK  G+SKISSQI+
Sbjct: 65 HFLLKRSGVSKISSQII 81

[Close]
BLAST of Cla97C05G090880 vs. NCBI nr
Match: XP_022985099.1 (LOW QUALITY PROTEIN: cation/H(+) antiporter 3-like [Cucurbita maxima])

HSP 1 Score: 85.9 bits (211), Expect = 8.3e-14
Identity = 40/68 (58.82%), Postives = 46/68 (67.65%), Query Frame = 0 

Query: 11 NHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGI 70
          N  +  C+  PF +NSKGLW   NDP  WL NSLP LELQL+LFCF++      LK FG 
Sbjct: 18 NLRSTTCIDFPFHVNSKGLWVKLNDPHWWLNNSLPLLELQLILFCFALVFAHHFLKRFGF 77

Query: 71 SKISSQIL 79
          SKISSQIL
Sbjct: 78 SKISSQIL 85

[Close]
BLAST of Cla97C05G090880 vs. NCBI nr
Match: KGN57865.1 (hypothetical protein Csa_3G355570 [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = 0 

Query: 10 LNHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFG 69
          LN  T  C   P  INS GLW N + P+ WL NSLP LELQLVLFCF MAI+ FLLK  G
Sbjct: 3  LNSTTLTCTFHPPFINSGGLWINIHRPQWWLNNSLPLLELQLVLFCFFMAIIHFLLKRSG 62

Query: 70 ISKISSQIL 79
          +SK+SSQI+
Sbjct: 63 VSKLSSQII 71

[Close]
BLAST of Cla97C05G090880 vs. NCBI nr
Match: XP_022922546.1 (cation/H(+) antiporter 12-like [Cucurbita moschata])

HSP 1 Score: 84.0 bits (206), Expect = 3.2e-13
Identity = 38/62 (61.29%), Postives = 44/62 (70.97%), Query Frame = 0 

Query: 17 CLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGISKISSQ 76
          C+  PF +NS+GLW   NDP  WL NSLP LELQL+LFCF++      LK FG SKISSQ
Sbjct: 24 CIDFPFHVNSRGLWVKLNDPHWWLNNSLPLLELQLILFCFALVFAHHFLKRFGFSKISSQ 83

Query: 77 IL 79
          IL
Sbjct: 84 IL 85

[Close]
BLAST of Cla97C05G090880 vs. NCBI nr
Match: XP_022141140.1 (cation/H(+) antiporter 3-like [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 5.4e-13
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 0 

Query: 11 NHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGI 70
          N  + ICL VP  I SKGLW  +NDP  WL+ SLP LE QL + CFS+ I   +LK FG+
Sbjct: 21 NSTSVICLDVPSHIISKGLWVQFNDPNWWLKGSLPLLEFQLTVLCFSLVITHLILKHFGV 80

Query: 71 SKISSQIL 79
          SK+SSQIL
Sbjct: 81 SKVSSQIL 88

[Close]
BLAST of Cla97C05G090880 vs. TrEMBL
Match: tr|A0A1S4DTU4|A0A1S4DTU4_CUCME (cation/H(+) antiporter 4-like OS=Cucumis melo OX=3656 GN=LOC103485746 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.5e-14
Identity = 44/77 (57.14%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 2  QSNRTTTTLNHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAIL 61
          Q   + +  N  T  C   P  +NS GLW N N  E WL NSLP LELQLVLFCF MAI+
Sbjct: 5  QGMESNSEFNLTTVTCTFHPPFVNSDGLWTNINRHEWWLNNSLPLLELQLVLFCFFMAII 64

Query: 62 RFLLKGFGISKISSQIL 79
           FLLK  G+SKISSQI+
Sbjct: 65 HFLLKRSGVSKISSQII 81

[Close]
BLAST of Cla97C05G090880 vs. TrEMBL
Match: tr|A0A0A0L7A8|A0A0A0L7A8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G355570 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.2e-14
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = 0 

Query: 10 LNHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFG 69
          LN  T  C   P  INS GLW N + P+ WL NSLP LELQLVLFCF MAI+ FLLK  G
Sbjct: 3  LNSTTLTCTFHPPFINSGGLWINIHRPQWWLNNSLPLLELQLVLFCFFMAIIHFLLKRSG 62

Query: 70 ISKISSQIL 79
          +SK+SSQI+
Sbjct: 63 VSKLSSQII 71

[Close]
BLAST of Cla97C05G090880 vs. TrEMBL
Match: tr|A0A1S3AYQ2|A0A1S3AYQ2_CUCME (uncharacterized protein LOC103484221 OS=Cucumis melo OX=3656 GN=LOC103484221 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.9e-13
Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 0 

Query: 11  NHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGI 70
           N  + IC+ +P  +NSKGLW  ++D E WL+ SLP LE QL++ CFS+AI  F LK  GI
Sbjct: 801 NMTSTICIDIPTYVNSKGLWVEFDDSEWWLKPSLPLLEFQLIVLCFSLAITYFFLKRLGI 860

Query: 71  SKISSQIL 79
           SKIS QIL
Sbjct: 861 SKISCQIL 868

[Close]
BLAST of Cla97C05G090880 vs. TrEMBL
Match: tr|A0A0A0LCS1|A0A0A0LCS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G355580 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.9e-13
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0 

Query: 11 NHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGI 70
          N    IC+ +P  +NSKGLW  ++D E WL  SLP LE QL++ CFS+AI  F LK FGI
Sbjct: 10 NMTATICIDIPPYVNSKGLWVEFDDSEWWLNPSLPLLEFQLIVLCFSLAITYFFLKRFGI 69

Query: 71 SKISSQIL 79
          SK+S QIL
Sbjct: 70 SKLSCQIL 77

[Close]
BLAST of Cla97C05G090880 vs. TrEMBL
Match: tr|A0A1S4DSI7|A0A1S4DSI7_CUCME (cation/H(+) antiporter 10-like OS=Cucumis melo OX=3656 GN=LOC103484220 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.4e-11
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0 

Query: 11 NHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGI 70
          N  + IC+ +P  +NSKGLW   +D E WL+ SLP LELQL++  FS+AI  F LK FGI
Sbjct: 10 NMTSTICIDIPTYVNSKGLW--VDDSEWWLKPSLPLLELQLIVLSFSLAITYFFLKRFGI 69

Query: 71 SKISSQIL 79
          SKIS QIL
Sbjct: 70 SKISCQIL 75

[Close]
BLAST of Cla97C05G090880 vs. Swiss-Prot
Match: sp|Q58P69|CHX10_ARATH (Cation/H(+) antiporter 10 OS=Arabidopsis thaliana OX=3702 GN=CHX10 PE=2 SV=2)

HSP 1 Score: 45.4 bits (106), Expect = 4.1e-04
Identity = 21/57 (36.84%), Postives = 34/57 (59.65%), Query Frame = 0 

Query: 22 FLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGISKISSQIL 79
          F I+S+G W N   P+     SLP LE+Q++L  F + +    L+  GIS+I+S ++
Sbjct: 15 FNISSQGFWDNLKSPDVVFGYSLPLLEIQIILIFFCIVMSHMFLRCIGISQIASYMI 71

[Close]
BLAST of Cla97C05G090880 vs. Swiss-Prot
Match: sp|Q9FYB9|CHX11_ARATH (Cation/H(+) antiporter 11 OS=Arabidopsis thaliana OX=3702 GN=CHX11 PE=2 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 5.3e-04
Identity = 25/73 (34.25%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 6  TTTTLNHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLL 65
          TTT + H    C    F I+S+G W N   P+     SLP LE+Q++L  F + +    L
Sbjct: 3  TTTYIGH----CRISFFNISSQGFWENLKSPDVVFGYSLPLLEIQIILIFFCIVMSHMFL 62

Query: 66 KGFGISKISSQIL 79
          +  G+S+I S ++
Sbjct: 63 RCIGVSQIVSYMI 71

[Close]
BLAST of Cla97C05G090880 vs. TAIR10
Match: AT3G44930.1 (cation/H+ exchanger 10)

HSP 1 Score: 45.4 bits (106), Expect = 2.3e-05
Identity = 21/57 (36.84%), Postives = 34/57 (59.65%), Query Frame = 0 

Query: 22 FLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLLKGFGISKISSQIL 79
          F I+S+G W N   P+     SLP LE+Q++L  F + +    L+  GIS+I+S ++
Sbjct: 15 FNISSQGFWDNLKSPDVVFGYSLPLLEIQIILIFFCIVMSHMFLRCIGISQIASYMI 71

[Close]
BLAST of Cla97C05G090880 vs. TAIR10
Match: AT3G44920.1 (cation/H+ exchanger 11)

HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05
Identity = 25/73 (34.25%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 6  TTTTLNHATEICLHVPFLINSKGLWGNYNDPETWLQNSLPRLELQLVLFCFSMAILRFLL 65
          TTT + H    C    F I+S+G W N   P+     SLP LE+Q++L  F + +    L
Sbjct: 3  TTTYIGH----CRISFFNISSQGFWENLKSPDVVFGYSLPLLEIQIILIFFCIVMSHMFL 62

Query: 66 KGFGISKISSQIL 79
          +  G+S+I S ++
Sbjct: 63 RCIGVSQIVSYMI 71

The following BLAST results are available for this feature:
BLAST of Cla97C05G090880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016899409.18.3e-1457.14PREDICTED: cation/H(+) antiporter 4-like [Cucumis melo][more]
XP_022985099.18.3e-1458.82LOW QUALITY PROTEIN: cation/H(+) antiporter 3-like [Cucurbita maxima][more]
KGN57865.11.1e-1362.32hypothetical protein Csa_3G355570 [Cucumis sativus][more]
XP_022922546.13.2e-1361.29cation/H(+) antiporter 12-like [Cucurbita moschata][more]
XP_022141140.15.4e-1357.35cation/H(+) antiporter 3-like [Momordica charantia][more]
BLAST of Cla97C05G090880 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DTU4|A0A1S4DTU4_CUCME5.5e-1457.14cation/H(+) antiporter 4-like OS=Cucumis melo OX=3656 GN=LOC103485746 PE=4 SV=1[more]
tr|A0A0A0L7A8|A0A0A0L7A8_CUCSA7.2e-1462.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G355570 PE=4 SV=1[more]
tr|A0A1S3AYQ2|A0A1S3AYQ2_CUCME7.9e-1355.88uncharacterized protein LOC103484221 OS=Cucumis melo OX=3656 GN=LOC103484221 PE=... [more]
tr|A0A0A0LCS1|A0A0A0LCS1_CUCSA7.9e-1355.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G355580 PE=4 SV=1[more]
tr|A0A1S4DSI7|A0A1S4DSI7_CUCME4.4e-1157.35cation/H(+) antiporter 10-like OS=Cucumis melo OX=3656 GN=LOC103484220 PE=4 SV=1[more]
BLAST of Cla97C05G090880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q58P69|CHX10_ARATH4.1e-0436.84Cation/H(+) antiporter 10 OS=Arabidopsis thaliana OX=3702 GN=CHX10 PE=2 SV=2[more]
sp|Q9FYB9|CHX11_ARATH5.3e-0434.25Cation/H(+) antiporter 11 OS=Arabidopsis thaliana OX=3702 GN=CHX11 PE=2 SV=2[more]
BLAST of Cla97C05G090880 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G44930.12.3e-0536.84cation/H+ exchanger 10[more]
AT3G44920.12.9e-0534.25cation/H+ exchanger 11[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006812 cation transport
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0015299 solute:proton antiporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G090880.1Cla97C05G090880.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G090880Watermelon (97103) v2wmbwmbB022
Cla97C05G090880Watermelon (97103) v2wmbwmbB130
Cla97C05G090880Silver-seed gourdcarwmbB0566
Cla97C05G090880Silver-seed gourdcarwmbB0533
Cla97C05G090880Silver-seed gourdcarwmbB1042
Cla97C05G090880Silver-seed gourdcarwmbB1046
Cla97C05G090880Cucumber (Gy14) v2cgybwmbB198
Cla97C05G090880Cucumber (Gy14) v2cgybwmbB214
Cla97C05G090880Cucumber (Gy14) v2cgybwmbB366
Cla97C05G090880Cucumber (Gy14) v1cgywmbB350
Cla97C05G090880Cucumber (Gy14) v1cgywmbB380
Cla97C05G090880Cucumber (Gy14) v1cgywmbB450
Cla97C05G090880Cucurbita maxima (Rimu)cmawmbB262
Cla97C05G090880Cucurbita maxima (Rimu)cmawmbB307
Cla97C05G090880Cucurbita maxima (Rimu)cmawmbB346
Cla97C05G090880Cucurbita maxima (Rimu)cmawmbB424
Cla97C05G090880Cucurbita maxima (Rimu)cmawmbB649
Cla97C05G090880Cucurbita moschata (Rifu)cmowmbB242
Cla97C05G090880Cucurbita moschata (Rifu)cmowmbB289
Cla97C05G090880Cucurbita moschata (Rifu)cmowmbB331
Cla97C05G090880Cucurbita moschata (Rifu)cmowmbB404
Cla97C05G090880Cucurbita moschata (Rifu)cmowmbB621
Cla97C05G090880Cucurbita moschata (Rifu)cmowmbB744
Cla97C05G090880Cucurbita moschata (Rifu)cmowmbB835
Cla97C05G090880Wild cucumber (PI 183967)cpiwmbB226
Cla97C05G090880Wild cucumber (PI 183967)cpiwmbB231
Cla97C05G090880Wild cucumber (PI 183967)cpiwmbB403
Cla97C05G090880Cucumber (Chinese Long) v3cucwmbB208
Cla97C05G090880Cucumber (Chinese Long) v3cucwmbB225
Cla97C05G090880Cucumber (Chinese Long) v3cucwmbB399
Cla97C05G090880Cucumber (Chinese Long) v2cuwmbB220
Cla97C05G090880Cucumber (Chinese Long) v2cuwmbB224
Cla97C05G090880Cucumber (Chinese Long) v2cuwmbB384
Cla97C05G090880Bottle gourd (USVL1VR-Ls)lsiwmbB019
Cla97C05G090880Bottle gourd (USVL1VR-Ls)lsiwmbB329
Cla97C05G090880Bottle gourd (USVL1VR-Ls)lsiwmbB332
Cla97C05G090880Melon (DHL92) v3.6.1medwmbB020
Cla97C05G090880Melon (DHL92) v3.6.1medwmbB280
Cla97C05G090880Melon (DHL92) v3.6.1medwmbB423
Cla97C05G090880Melon (DHL92) v3.6.1medwmbB432
Cla97C05G090880Melon (DHL92) v3.5.1mewmbB023
Cla97C05G090880Melon (DHL92) v3.5.1mewmbB297
Cla97C05G090880Melon (DHL92) v3.5.1mewmbB434
Cla97C05G090880Melon (DHL92) v3.5.1mewmbB439
Cla97C05G090880Watermelon (Charleston Gray)wcgwmbB108
Cla97C05G090880Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G090880Watermelon (Charleston Gray)wcgwmbB232
Cla97C05G090880Watermelon (97103) v1wmwmbB206
Cla97C05G090880Watermelon (97103) v1wmwmbB212
Cla97C05G090880Watermelon (97103) v1wmwmbB268
Cla97C05G090880Wax gourdwgowmbB073
Cla97C05G090880Wax gourdwgowmbB179
Cla97C05G090880Wax gourdwgowmbB190