Cla97C05G090600 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGCTTGGAGTTCAACCAAATATGGCAATTGTCACTATGGTTGGAAATGTCTTCCACGAATTAGGCATGCTCGATAAATACGAAAAACTGATGAGGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAGCGTGTAAGAATACGATCAAAGTATTTGTATGAAAATGGTAATTCCAACAATTGTTCAAGTGAGCTTGACAAAATGGAGCATAGTTCAACAAAGCCGTTGGAGGAAGCTGAAATAACCTCCGAGAATTCCAGTCTTGAAGATGATGAGGAAATGAGCGAAGATCCAGATGAAATTCTGGATGATGAATGTATGTCGAAGGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAA ATGGAGGAGCTTGGAGTTCAACCAAATATGGCAATTGTCACTATGGTTGGAAATGTCTTCCACGAATTAGGCATGCTCGATAAATACGAAAAACTGATGAGGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAGCGTGTAAGAATACGATCAAAGTATTTGTATGAAAATGGTAATTCCAACAATTGTTCAAGTGAGCTTGACAAAATGGAGCATAGTTCAACAAAGCCGTTGGAGGAAGCTGAAATAACCTCCGAGAATTCCAGTCTTGAAGATGATGAGGAAATGAGCGAAGATCCAGATGAAATTCTGGATGATGAATGTATGTCGAAGGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAA ATGGAGGAGCTTGGAGTTCAACCAAATATGGCAATTGTCACTATGGTTGGAAATGTCTTCCACGAATTAGGCATGCTCGATAAATACGAAAAACTGATGAGGAAATATCCCCCACCAAAATGGGAATATCGTTACATCAAAGGAAAGCGTGTAAGAATACGATCAAAGTATTTGTATGAAAATGGTAATTCCAACAATTGTTCAAGTGAGCTTGACAAAATGGAGCATAGTTCAACAAAGCCGTTGGAGGAAGCTGAAATAACCTCCGAGAATTCCAGTCTTGAAGATGATGAGGAAATGAGCGAAGATCCAGATGAAATTCTGGATGATGAATGTATGTCGAAGGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAA MEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMRKYPPPKWEYRYIKGKRVRIRSKYLYENGNSNNCSSELDKMEHSSTKPLEEAEITSENSSLEDDEEMSEDPDEILDDECMSKESNFEHDFMGFGQL
BLAST of Cla97C05G090600 vs. NCBI nr
Match: XP_008439301.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Cucumis melo]) HSP 1 Score: 183.7 bits (465), Expect = 3.9e-43 Identity = 95/129 (73.64%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of Cla97C05G090600 vs. NCBI nr
Match: XP_016899030.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Cucumis melo]) HSP 1 Score: 183.7 bits (465), Expect = 3.9e-43 Identity = 95/129 (73.64%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of Cla97C05G090600 vs. NCBI nr
Match: XP_004140747.2 (PREDICTED: pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus] >KGN57423.1 hypothetical protein Csa_3G184050 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 1.9e-37 Identity = 99/129 (76.74%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of Cla97C05G090600 vs. NCBI nr
Match: XP_022140817.1 (pentatricopeptide repeat-containing protein At4g21190 [Momordica charantia]) HSP 1 Score: 148.3 bits (373), Expect = 1.8e-32 Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of Cla97C05G090600 vs. NCBI nr
Match: XP_022945794.1 (pentatricopeptide repeat-containing protein At4g21190 [Cucurbita moschata]) HSP 1 Score: 143.7 bits (361), Expect = 4.5e-31 Identity = 91/130 (70.00%), Postives = 101/130 (77.69%), Query Frame = 0
BLAST of Cla97C05G090600 vs. TrEMBL
Match: tr|A0A1S3AY30|A0A1S3AY30_CUCME (pentatricopeptide repeat-containing protein At4g21190 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484127 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.6e-43 Identity = 95/129 (73.64%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of Cla97C05G090600 vs. TrEMBL
Match: tr|A0A1S4DTK8|A0A1S4DTK8_CUCME (pentatricopeptide repeat-containing protein At4g21190 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484127 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.6e-43 Identity = 95/129 (73.64%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of Cla97C05G090600 vs. TrEMBL
Match: tr|A0A0A0L6Q9|A0A0A0L6Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G184050 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.2e-37 Identity = 99/129 (76.74%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of Cla97C05G090600 vs. TrEMBL
Match: tr|A0A2I4G3X3|A0A2I4G3X3_9ROSI (pentatricopeptide repeat-containing protein At4g21190 OS=Juglans regia OX=51240 GN=LOC109004499 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.1e-21 Identity = 54/95 (56.84%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of Cla97C05G090600 vs. TrEMBL
Match: tr|A0A2N9IHZ2|A0A2N9IHZ2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51807 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20 Identity = 53/95 (55.79%), Postives = 74/95 (77.89%), Query Frame = 0
BLAST of Cla97C05G090600 vs. Swiss-Prot
Match: sp|Q8LG95|PP332_ARATH (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 7.8e-19 Identity = 46/77 (59.74%), Postives = 63/77 (81.82%), Query Frame = 0
BLAST of Cla97C05G090600 vs. TAIR10
Match: AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 94.7 bits (234), Expect = 4.3e-20 Identity = 46/77 (59.74%), Postives = 63/77 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |