Cla97C05G090290 (gene) Watermelon (97103) v2

NameCla97C05G090290
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 8407838 .. 8409416 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAGTCGCAATTTCCACGACGACGGAGGAAAAAAGATCGACGGTTGTGCCGGCGACGGATGGTGGAGCCCGCCACCGACTGTGAGAGAATGGATATAATGAGATTGAAAGGACAAATGGTAAACTTCTTTAGGGATGGTTCTTAAATCTTAGGGTTAAATCTGTTCAATTATTACTAACCCTTATCCCAATTTATTTGTCCATTGGTTTGAAAAAGCTTCACGATCTTCACAATTAATAGTCTGTAAAGAAATGAACGGCTAATATGCTGAACACATCGATGAATAGTGATGTTCAATTTTGTTTTTAGTTTAAAAGTGAAAATTAGGAGTAAAATTAATAATGGATTTGGGAATCACATTCACAGATAACTTGAACAGCTCGACGAAATAGCTATGAAATTGGTTACTGACGAAAAATTCTGTCTGTATGTAGGCATTATTTTATATAAAAGCCGGGAGCTTACCATGTGGACAGGAATGAAGTCCAACTTTTCGTTTGCTCTGAATTACTGTGAGAACCTCCATAATATCCACTTTTGATTAGATTCCCATTCGTTTTCGAAGAGAAAAACAAGATTAGATCTCTTATTTTTGGATCCAGATGCAAACAAATTTTTGCGTAAGTTCTTTAAGCTTCCCTTGCAGGTTGCAAAAGTTGTTTCATCTTTATAATTTCTGATGCTATGTCTTCAATGATAGTGCATCAATTTGAGTCCATTTTTACACACTTTCCTCTTTTGATGTAGGGCCCCTCTTAATCTTTTGTCTTTTAAACTTGAATTTGTTAACTTCCTATCTGGGACGTATTTTATTGGTCGGATTGGAGATTTCAAGTTCCATGTTTAAGCCATGAGAGCTTGGAGGTGGTCTTTTCTGAAGTATGTGAAAAACCTGCATTTAGTTTTTGTAATTTAATTTAATCTTTCTACCCTTAATTTGGTTCCCATCTCCGATTCTTATTGGTCCATGAATTTGGTAATTCCACTATACTTCTTGGAAGATTTGGATTCTGAATTCCATGGCAATGACTACTTAGAAACTAATGTCACTGCCCAAATGCGAGCCAGTTGGTAATCTGGTTTAGAAGTGGCTGAAAAAGCAGAGTTTCAAGTACTGTTTGATACCATGTTATTTTCAATATAATTGTATGAGTCCTACTTCTAAAAGTTCTAGCTATTAGATTAATATTCATTCCTATATATTGCCTGAACTTTTTGTTAATTAATGTTGCATGGCAAGTGGACTTCTTATCTTCAAAGTTAAAATATAGAGGAAGTGCGTACAAGTTGGCTCAATCAGCATTTATCTCTTAGAGTTTAGCTTTTAGAAAGTTAGATGTTTCATGTATAAATTCTTCACTGATGGTTTATGTTCAGAAATTTTGTCTTCGTTTCAAGCTACATAGCAGGTTCCATGTACTGCTTTTTGTCTTTTGTTTATCCACCCTCTGCATTCCATCATTTTGTTTATAGTTTCTTTTTGTTAATTCTCTGTTAAGATATTCAAACTAAATTCTCCTCAGGTTGGCTTGGGTGAGAAGTTGAATCAAGATACTCAGCTGCTCTGGTGCTGA

mRNA sequence

ATGAGAAAGTCGCAATTTCCACGACGACGGAGGAAAAAAGATCGACGGTTGTGCCGGCGACGGATGGTGGAGCCCGCCACCGACTGTGAGAGAATGGATATAATGAGATTGAAAGGACAAATGATATTCAAACTAAATTCTCCTCAGGTTGGCTTGGGTGAGAAGTTGAATCAAGATACTCAGCTGCTCTGGTGCTGA

Coding sequence (CDS)

ATGAGAAAGTCGCAATTTCCACGACGACGGAGGAAAAAAGATCGACGGTTGTGCCGGCGACGGATGGTGGAGCCCGCCACCGACTGTGAGAGAATGGATATAATGAGATTGAAAGGACAAATGATATTCAAACTAAATTCTCCTCAGGTTGGCTTGGGTGAGAAGTTGAATCAAGATACTCAGCTGCTCTGGTGCTGA

Protein sequence

MRKSQFPRRRRKKDRRLCRRRMVEPATDCERMDIMRLKGQMIFKLNSPQVGLGEKLNQDTQLLWC
BLAST of Cla97C05G090290 vs. TrEMBL
Match: tr|A0A0A0L8R6|A0A0A0L8R6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182790 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.7e-04
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1  MRKSQFPRRRRKKDRRLCRRRMVEPATDCERMDIMRLKGQMI 43
          MRKS+F RRR KK R L RRR+VEPA DC+R+D M+L GQM+
Sbjct: 1  MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQML 42

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L8R6|A0A0A0L8R6_CUCSA7.7e-0466.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182790 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G090290.1Cla97C05G090290.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None