Cla97C05G089460 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G089460
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Embryo-specific family protein
Location	Cla97Chr05 : 7638572 .. 7639809 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGGGTACTCTGTTTTCTGCTTACCTCCGCCATTCTTTTCCCTCTCTTAGAAGCCACCGAATTGCTACCCCAACCCGCTGAATCCTTTAATTTAACCTATATTCAGGTATCGCCGTTTCGTATTGGTTTTTTCCATTTCCATTTTTGCTGATTCTCAATCTGTTATCTGAGAACGATTCTGTGTTTTCTGATTTTGAAGCAACTCGGGAGTTGTTCTTATTCGGTTGTTATATCGACGAGCTGTTCGTCGCCTTCATACACGAGGGATCAGATCAGTCTTTCATTCGGCGATGCTTATGGAAACCAGGTTTTCCTCGATTAAATCTTCATTTCCCCGCTAATATTATCGGGATAGAAAGCCCTTGGTTTCTCGATCGTTCACGATTTAGCTAATTTCAGATATTCGAAATGGTTGATGAAAAAAATCGGAGTTGAATTTTGCATCTGAGTTTCGGAAAGTTTTCCATTTGATTAGGGATAAAAACGCATAGGCATATTAATATCTTAGGTTAAAGTAATAGATTGGTACATTAACACATCTATTTCTCGAATCTTGATTATTATGGGATCATAGTCTGTTGATTTATATGTTTCAGAACTTCAAATCAGGTATGTATTTATTGGTACATTAACATATCTTAGAAAACATATCCATAGTCATTAGCCTGTTGAGCAATATCTTATAGTCCATTGATATGCCTAGAACTTCCTAAAACATTTTAAAGTTTCTCGAAACATCAGCAGTTCACAATGTGGAAATACAGGAATTTGAAAGAACACCATGTGATAATTCAAAAACAATAAACTTGTCTTCACTTTCAGATAAACTTGGGAATTTAACATGTTACAATTAATCATTGAAGAAGTTTGTTTTGTATAATGAGTGGTGAGTTTTGACTTGTGTACCAGATTTATGTGCCAAGGCTTGATGACCCATCTAGAAGGATATTTGAAAGATGTTCTGATGATAAATTTGGACTAAATGGACCCTGTGCTTACCAAATATGCTATGTTTATCTTTATCGCTCCGGACCAGATGCCTGGATTCCAACGACAGTGACAATCTCTGGTGATCATTCTAGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGATGTATGGTTCGGGTTTAACTTGTGTGGTCATGCTTCATCTTCAAACCGTAGTTCAAGTTGCATAGGGCTCTTATATGTCATTTTAGTGTCTATGCTTCTACTTCTCTTGTAA

mRNA sequence

ATGAAAGGGGTACTCTGTTTTCTGCTTACCTCCGCCATTCTTTTCCCTCTCTTAGAAGCCACCGAATTGCTACCCCAACCCGCTGAATCCTTTAATTTAACCTATATTCAGCAACTCGGGAGTTGTTCTTATTCGGTTGTTATATCGACGAGCTGTTCGTCGCCTTCATACACGAGGGATCAGATCAGTCTTTCATTCGGCGATGCTTATGGAAACCAGATTTATGTGCCAAGGCTTGATGACCCATCTAGAAGGATATTTGAAAGATGTTCTGATGATAAATTTGGACTAAATGGACCCTGTGCTTACCAAATATGCTATGTTTATCTTTATCGCTCCGGACCAGATGCCTGGATTCCAACGACAGTGACAATCTCTGGTGATCATTCTAGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGATGTATGGTTCGGGTTTAACTTGTGTGGTCATGCTTCATCTTCAAACCGTAGTTCAAGTTGCATAGGGCTCTTATATGTCATTTTAGTGTCTATGCTTCTACTTCTCTTGTAA

Coding sequence (CDS)

ATGAAAGGGGTACTCTGTTTTCTGCTTACCTCCGCCATTCTTTTCCCTCTCTTAGAAGCCACCGAATTGCTACCCCAACCCGCTGAATCCTTTAATTTAACCTATATTCAGCAACTCGGGAGTTGTTCTTATTCGGTTGTTATATCGACGAGCTGTTCGTCGCCTTCATACACGAGGGATCAGATCAGTCTTTCATTCGGCGATGCTTATGGAAACCAGATTTATGTGCCAAGGCTTGATGACCCATCTAGAAGGATATTTGAAAGATGTTCTGATGATAAATTTGGACTAAATGGACCCTGTGCTTACCAAATATGCTATGTTTATCTTTATCGCTCCGGACCAGATGCCTGGATTCCAACGACAGTGACAATCTCTGGTGATCATTCTAGACCTGTCACGTTTAACTACAACACTGCCATACCGAACGATGTATGGTTCGGGTTTAACTTGTGTGGTCATGCTTCATCTTCAAACCGTAGTTCAAGTTGCATAGGGCTCTTATATGTCATTTTAGTGTCTATGCTTCTACTTCTCTTGTAA

Protein sequence

MKGVLCFLLTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVILVSMLLLLL

Homology

[Close]

BLAST of Cla97C05G089460 vs. NCBI nr
Match: XP_008439126.1 (PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 1.0e-86
Identity = 160/180 (88.89%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MKGVLCFLLTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRD 60
           +KGVLC LLTSAILFP LEATELLP+PAESFNLTYIQQLGSCSYSVVISTSC SP+YTRD
Sbjct: 3   IKGVLCLLLTSAILFPSLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPTYTRD 62

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIP 120
           QISLSFGDAYGNQIYVPRLDDPSRRIFERCS D FG+NGPCAYQICYVYLYR+GPDAWIP
Sbjct: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122

Query: 121 TTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVILVSMLLLLL 180
           TTVTISG +SRPVTFNYNTAIP+DVWFGFNLCGH SSSN  S CIG  YVILVS+LLLLL
Sbjct: 123 TTVTISGHNSRPVTFNYNTAIPSDVWFGFNLCGHPSSSNHISGCIGCFYVILVSILLLLL 182

[Close]

BLAST of Cla97C05G089460 vs. NCBI nr
Match: XP_004148122.1 (PREDICTED: uncharacterized protein LOC101207117 [Cucumis sativus] >KGN57305.1 hypothetical protein Csa_3G177980 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 1.8e-86
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MKGVLCFLLTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRD 60
           +KGVLC LLTSAILF  LEATELLP+PAESFNLTYIQQLGSCSYSVVISTSC SP+YTRD
Sbjct: 3   IKGVLCLLLTSAILFSFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRD 62

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIP 120
           QISLSFGDAYGNQIYVPRLDDPSRRIFERCS D FG+NGPCAYQICYVYLYR+GPDAWIP
Sbjct: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122

Query: 121 TTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVILVSMLLLLL 180
           TTV ISGD+SRPVTFNYNTAIP DVWFGFNLCGH SSSNR SSCIG  YVI+VS++LLLL
Sbjct: 123 TTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVIIVSIILLLL 182

[Close]

BLAST of Cla97C05G089460 vs. NCBI nr
Match: XP_022923164.1 (embryo-specific protein ATS3B-like [Cucurbita moschata])

HSP 1 Score: 317.4 bits (812), Expect = 3.1e-83
Identity = 155/180 (86.11%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MKGVLCFLLTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRD 60
           MK VLCFLLTSA+L  LLEATELLP+ AESFNLTYIQQLGSCSYSVVISTSCSSP+YTRD
Sbjct: 1   MKRVLCFLLTSALLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCS D F ++GPCAYQICYVYLYR+GPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLYRTGPDAWIP 120

Query: 121 TTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVILVSMLLLLL 180
           TTV ISG +SRPVTFNYNTAIPNDVWFGFNLCGHASSSNR SSCI  LYV  VS+LLL L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYVSFVSILLLFL 180

[Close]

BLAST of Cla97C05G089460 vs. NCBI nr
Match: XP_022984446.1 (embryo-specific protein ATS3B-like [Cucurbita maxima])

HSP 1 Score: 317.0 bits (811), Expect = 4.1e-83
Identity = 155/180 (86.11%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MKGVLCFLLTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRD 60
           MK VLCFLLTSA L  LLEATELLP+ AESFNLTYIQQLGSCSYSVVISTSCSSP+YTRD
Sbjct: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCS D F ++GPCAYQ+CYVYLYRSGPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIP 120

Query: 121 TTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVILVSMLLLLL 180
           TTV ISG +SRPVTFNYNTAIPNDVWFGFNLCGHASSSNR SSCI  LYV  VS+LLL L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYVSFVSILLLFL 180

[Close]

BLAST of Cla97C05G089460 vs. NCBI nr
Match: XP_023552620.1 (embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 154/180 (85.56%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 1   MKGVLCFLLTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRD 60
           MK VLCFLLTSA L  LLEATELLP+ AESFNLTYIQQL SCSYSVVISTSCSSP+YTRD
Sbjct: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLASCSYSVVISTSCSSPTYTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCS D F ++GPCAYQICYVYLYRSGPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLYRSGPDAWIP 120

Query: 121 TTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVILVSMLLLLL 180
           TTV ISG +SRPVTFNYNTAIPNDVWFGFNLCGH+SSSNR SSCI  LYV  VS+LLL L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHSSSSNRISSCIWFLYVSFVSILLLFL 180

[Close]

BLAST of Cla97C05G089460 vs. TrEMBL
Match: tr|A0A1S3AXZ5|A0A1S3AXZ5_CUCME (uncharacterized protein LOC103484016 OS=Cucumis melo OX=3656 GN=LOC103484016 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 6.9e-87
Identity = 160/180 (88.89%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MKGVLCFLLTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRD 60
           +KGVLC LLTSAILFP LEATELLP+PAESFNLTYIQQLGSCSYSVVISTSC SP+YTRD
Sbjct: 3   IKGVLCLLLTSAILFPSLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPTYTRD 62

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIP 120
           QISLSFGDAYGNQIYVPRLDDPSRRIFERCS D FG+NGPCAYQICYVYLYR+GPDAWIP
Sbjct: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122

Query: 121 TTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVILVSMLLLLL 180
           TTVTISG +SRPVTFNYNTAIP+DVWFGFNLCGH SSSN  S CIG  YVILVS+LLLLL
Sbjct: 123 TTVTISGHNSRPVTFNYNTAIPSDVWFGFNLCGHPSSSNHISGCIGCFYVILVSILLLLL 182

[Close]

BLAST of Cla97C05G089460 vs. TrEMBL
Match: tr|A0A0A0L5P4|A0A0A0L5P4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177980 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MKGVLCFLLTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRD 60
           +KGVLC LLTSAILF  LEATELLP+PAESFNLTYIQQLGSCSYSVVISTSC SP+YTRD
Sbjct: 3   IKGVLCLLLTSAILFSFLEATELLPKPAESFNLTYIQQLGSCSYSVVISTSCLSPAYTRD 62

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIP 120
           QISLSFGDAYGNQIYVPRLDDPSRRIFERCS D FG+NGPCAYQICYVYLYR+GPDAWIP
Sbjct: 63  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRTGPDAWIP 122

Query: 121 TTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVILVSMLLLLL 180
           TTV ISGD+SRPVTFNYNTAIP DVWFGFNLCGH SSSNR SSCIG  YVI+VS++LLLL
Sbjct: 123 TTVRISGDNSRPVTFNYNTAIPGDVWFGFNLCGHPSSSNRISSCIGWFYVIIVSIILLLL 182

[Close]

BLAST of Cla97C05G089460 vs. TrEMBL
Match: tr|A0A2I0KB96|A0A2I0KB96_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_013857 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.4e-55
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 25  PQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPRLDDPSR 84
           P   ESFNL+YIQQ+GSCSYSV+I+TSCSSPSYTRDQIS++FGDAYGNQIY PR+DDPS 
Sbjct: 26  PHALESFNLSYIQQVGSCSYSVLITTSCSSPSYTRDQISIAFGDAYGNQIYAPRIDDPST 85

Query: 85  RIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYNTAIPND 144
           R FERCS D F + GPCAYQICYVYLY+SGPD W P +VTI G +S+ VTF+YNT IPN+
Sbjct: 86  RTFERCSSDTFEIRGPCAYQICYVYLYKSGPDGWKPGSVTIYGHNSKAVTFSYNTFIPNE 145

Query: 145 VWFGFNLCGHASSSNRSSSCIGLLYVILVSMLL 178
           VW+GFNLC   + S+ +   + L Y +L S+ L
Sbjct: 146 VWYGFNLCNSGAPSSGTRFRVSLAYGLLASIAL 178

[Close]

BLAST of Cla97C05G089460 vs. TrEMBL
Match: tr|A0A061G0A9|A0A061G0A9_THECC (DEAD-box ATP-dependent RNA helicase 7 OS=Theobroma cacao OX=3641 GN=TCM_015015 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.5e-54
Identity = 102/142 (71.83%), Postives = 115/142 (80.99%), Query Frame = 0


Query: 19  EATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPR 78
           E+    PQ  ESFN++YIQ LGSCSYSVVISTSCSS SYTRDQIS++FGDAYGNQIYVPR
Sbjct: 234 ESISQKPQAFESFNVSYIQNLGSCSYSVVISTSCSSTSYTRDQISIAFGDAYGNQIYVPR 293

Query: 79  LDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYN 138
           LDDPS R FE+CS D F + GPCAYQICYVYLYRSGPD W P +V I G +SR VTF Y+
Sbjct: 294 LDDPSTRTFEQCSSDTFEIYGPCAYQICYVYLYRSGPDGWKPESVKIYGYNSRAVTFYYD 353

Query: 139 TAIPNDVWFGFNLCGHASSSNR 161
           T IP D+W+GFN C  ASSS+R
Sbjct: 354 TFIPGDIWYGFNYCNTASSSHR 375

[Close]

BLAST of Cla97C05G089460 vs. TrEMBL
Match: tr|A0A2I4FGU4|A0A2I4FGU4_9ROSI (uncharacterized protein LOC108998669 OS=Juglans regia OX=51240 GN=LOC108998669 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.8e-53
Identity = 107/169 (63.31%), Postives = 124/169 (73.37%), Query Frame = 0


Query: 7   FLLTSAILFPLLEATELLPQP---AESFNLTYIQQLGSCSYSVVISTSCSSPSYTRDQIS 66
           FLL  A +F L EA     QP   AESFN++YIQ   SCSY+ VI+TSCSS SYTRDQIS
Sbjct: 7   FLLQFAFIFILSEAKSSWLQPQAAAESFNISYIQSAASCSYTAVITTSCSSTSYTRDQIS 66

Query: 67  LSFGDAYGNQIYVPRLDDPSRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIPTTV 126
           +SFGDAYGNQIY PRLDDPS   FERCS D + +NGPCAYQICYVYLYR+GPD W P +V
Sbjct: 67  ISFGDAYGNQIYAPRLDDPSSGAFERCSSDTYQINGPCAYQICYVYLYRTGPDGWKPKSV 126

Query: 127 TISGDHSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRSSSCIGLLYVIL 173
            I G +SR VTF Y+  IP+D+W+GFNLC  ASSS   S     +YV+L
Sbjct: 127 KIYGYNSRAVTFYYDVFIPSDIWYGFNLCQSASSSGHHSGWKWFVYVVL 175

[Close]

BLAST of Cla97C05G089460 vs. Swiss-Prot
Match: sp|Q6NPM5|ATS3B_ARATH (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-50
Identity = 99/161 (61.49%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 25  PQPAESFNLTYIQQLG-SCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPRLDDPS 84
           P  AESFN++ IQ+LG +C+Y+V+ISTSCSS  YTRDQIS++FGD YGNQIY PRLDDPS
Sbjct: 30  PHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPS 89

Query: 85  RRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYNTAIPN 144
            + FE+CS D F +NGPC YQICYVYLYRSGPD WIP TV I    S+ VTF YNT +P 
Sbjct: 90  TKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPE 149

Query: 145 DVWFGFNLCGHASSSN------RSSSCIGLLYVILVSMLLL 179
            VW+GFN C  AS SN      R S  I L +V+  + LLL
Sbjct: 150 SVWYGFNYCNSASDSNVLAIGLRRSVIILLGFVVAGTTLLL 190

[Close]

BLAST of Cla97C05G089460 vs. Swiss-Prot
Match: sp|Q681K2|ATS3A_ARATH (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 72/138 (52.17%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 25  PQPAESF-NLTYIQQLGSCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPRLDDPS 84
           P P +SF     ++   +CSY+V+I TSCSS SYTRD+IS+SFGD YGN++YV RLDDPS
Sbjct: 30  PLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPS 89

Query: 85  RRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYNTAIPN 144
            R FE+CS D + ++GPC   +CY+YL R G D W P  V I G   R VTF YN  +PN
Sbjct: 90  SRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPN 149

Query: 145 DVWFGFNLCGHASSSNRS 162
            VW+GFN+C    ++  S
Sbjct: 150 SVWYGFNVCNGIGNTKSS 167

[Close]

BLAST of Cla97C05G089460 vs. Swiss-Prot
Match: sp|Q9LYP6|ATS3_ARATH (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-23
Identity = 57/139 (41.01%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 30  SFNLTYIQ-QLGSCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPRLDDPSRRI-- 89
           +F+L+ IQ Q G+C Y+VV+ TSC SP  TRDQIS+ FGDA GN++Y P+L    R    
Sbjct: 21  AFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGG 80

Query: 90  FERCSDDKFGLNGPCAYQ-ICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYNTAIPN-D 149
             +CS + F + G C    IC +Y+ R+GPD W+P ++ I  + S+ V F+++ ++P  +
Sbjct: 81  LGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLN 140

Query: 150 VWFGFNLCGHASSSNRSSS 164
            W+G N C   +++ R SS
Sbjct: 141 TWYGHNNC---NTTGRPSS 156

[Close]

BLAST of Cla97C05G089460 vs. TAIR10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3))

HSP 1 Score: 200.7 bits (509), Expect = 7.8e-52
Identity = 99/161 (61.49%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 25  PQPAESFNLTYIQQLG-SCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPRLDDPS 84
           P  AESFN++ IQ+LG +C+Y+V+ISTSCSS  YTRDQIS++FGD YGNQIY PRLDDPS
Sbjct: 30  PHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPS 89

Query: 85  RRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYNTAIPN 144
            + FE+CS D F +NGPC YQICYVYLYRSGPD WIP TV I    S+ VTF YNT +P 
Sbjct: 90  TKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPE 149

Query: 145 DVWFGFNLCGHASSSN------RSSSCIGLLYVILVSMLLL 179
            VW+GFN C  AS SN      R S  I L +V+  + LLL
Sbjct: 150 SVWYGFNYCNSASDSNVLAIGLRRSVIILLGFVVAGTTLLL 190

[Close]

BLAST of Cla97C05G089460 vs. TAIR10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3))

HSP 1 Score: 163.3 bits (412), Expect = 1.4e-40
Identity = 72/138 (52.17%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 25  PQPAESF-NLTYIQQLGSCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPRLDDPS 84
           P P +SF     ++   +CSY+V+I TSCSS SYTRD+IS+SFGD YGN++YV RLDDPS
Sbjct: 30  PLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPS 89

Query: 85  RRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYNTAIPN 144
            R FE+CS D + ++GPC   +CY+YL R G D W P  V I G   R VTF YN  +PN
Sbjct: 90  SRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPN 149

Query: 145 DVWFGFNLCGHASSSNRS 162
            VW+GFN+C    ++  S
Sbjct: 150 SVWYGFNVCNGIGNTKSS 167

[Close]

BLAST of Cla97C05G089460 vs. TAIR10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3))

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 62/155 (40.00%), Postives = 90/155 (58.06%), Query Frame = 0


Query: 4   VLCFL--LTSAILFPLLEATELLPQPAESFNLTYIQQLGSCSYSVVISTSCSSPSYTRDQ 63
           VLCF   + S    PL+ + +L              +  SC Y+V+++TSC SP ++RDQ
Sbjct: 13  VLCFTHPIPSLTFEPLISSLDL-------------HEEESCPYTVIVTTSCFSPDWSRDQ 72

Query: 64  ISLSFGDAYGNQIYVPRLDDP--SRRIFERCSDDKFGLNGPCAYQICYVYLYRSGPDAWI 123
           ++++ GDA  NQ+  PRLD P      FE+CS D F + G C   IC VY+YRSG D WI
Sbjct: 73  VTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGKCLNTICSVYIYRSGTDGWI 132

Query: 124 PTTVTISGDHSRPVTFNYNTAIPNDVWFGFNLCGH 155
           P TV I  + S+ V F++N  +P ++W+G N C +
Sbjct: 133 PETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNN 154

[Close]

BLAST of Cla97C05G089460 vs. TAIR10
Match: AT5G07190.1 (seed gene 3)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 57/139 (41.01%), Postives = 88/139 (63.31%), Query Frame = 0


Query: 30  SFNLTYIQ-QLGSCSYSVVISTSCSSPSYTRDQISLSFGDAYGNQIYVPRLDDPSRRI-- 89
           +F+L+ IQ Q G+C Y+VV+ TSC SP  TRDQIS+ FGDA GN++Y P+L    R    
Sbjct: 21  AFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGG 80

Query: 90  FERCSDDKFGLNGPCAYQ-ICYVYLYRSGPDAWIPTTVTISGDHSRPVTFNYNTAIPN-D 149
             +CS + F + G C    IC +Y+ R+GPD W+P ++ I  + S+ V F+++ ++P  +
Sbjct: 81  LGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLN 140

Query: 150 VWFGFNLCGHASSSNRSSS 164
            W+G N C   +++ R SS
Sbjct: 141 TWYGHNNC---NTTGRPSS 156

The following BLAST results are available for this feature:

BLAST of Cla97C05G089460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439126.1	1.0e-86	88.89	PREDICTED: uncharacterized protein LOC103484016 [Cucumis melo]	[more]
XP_004148122.1	1.8e-86	88.33	PREDICTED: uncharacterized protein LOC101207117 [Cucumis sativus] >KGN57305.1 hy...	[more]
XP_022923164.1	3.1e-83	86.11	embryo-specific protein ATS3B-like [Cucurbita moschata]	[more]
XP_022984446.1	4.1e-83	86.11	embryo-specific protein ATS3B-like [Cucurbita maxima]	[more]
XP_023552620.1	2.7e-82	85.56	embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C05G089460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AXZ5\|A0A1S3AXZ5_CUCME	6.9e-87	88.89	uncharacterized protein LOC103484016 OS=Cucumis melo OX=3656 GN=LOC103484016 PE=...	[more]
tr\|A0A0A0L5P4\|A0A0A0L5P4_CUCSA	1.2e-86	88.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177980 PE=4 SV=1	[more]
tr\|A0A2I0KB96\|A0A2I0KB96_PUNGR	2.4e-55	66.67	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_013857 PE=4 SV=1	[more]
tr\|A0A061G0A9\|A0A061G0A9_THECC	4.5e-54	71.83	DEAD-box ATP-dependent RNA helicase 7 OS=Theobroma cacao OX=3641 GN=TCM_015015 P...	[more]
tr\|A0A2I4FGU4\|A0A2I4FGU4_9ROSI	3.8e-53	63.31	uncharacterized protein LOC108998669 OS=Juglans regia OX=51240 GN=LOC108998669 P...	[more]

BLAST of Cla97C05G089460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NPM5\|ATS3B_ARATH	1.4e-50	61.49	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
sp\|Q681K2\|ATS3A_ARATH	2.5e-39	52.17	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
sp\|Q9LYP6\|ATS3_ARATH	1.9e-23	41.01	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of Cla97C05G089460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62200.1	7.8e-52	61.49	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	1.4e-40	52.17	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	1.2e-28	40.00	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	1.1e-24	41.01	seed gene 3	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036392	PLAT/LH2_dom_sf
IPR010417	Embryo-specific_ATS3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G089460.1	Cla97C05G089460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 37..152 e-value: 2.0E-50 score: 169.8
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 6..174
None	No IPR available	PANTHER	PTHR31718:SF8	EMBRYO-SPECIFIC PROTEIN 3	coord: 6..174
None	No IPR available	CDD	cd00113	PLAT	coord: 42..152 e-value: 4.54092E-25 score: 93.9428
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 38..149

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G089460	Watermelon (97103) v2	wmbwmbB023
Cla97C05G089460	Watermelon (97103) v2	wmbwmbB140
Cla97C05G089460	Silver-seed gourd	carwmbB0101
Cla97C05G089460	Silver-seed gourd	carwmbB0743
Cla97C05G089460	Silver-seed gourd	carwmbB0910
Cla97C05G089460	Silver-seed gourd	carwmbB0969
Cla97C05G089460	Silver-seed gourd	carwmbB0984
Cla97C05G089460	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G089460	Cucumber (Gy14) v2	cgybwmbB367
Cla97C05G089460	Cucumber (Gy14) v2	cgybwmbB443
Cla97C05G089460	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G089460	Cucumber (Gy14) v1	cgywmbB522
Cla97C05G089460	Cucumber (Gy14) v1	cgywmbB621
Cla97C05G089460	Cucurbita maxima (Rimu)	cmawmbB304
Cla97C05G089460	Cucurbita maxima (Rimu)	cmawmbB346
Cla97C05G089460	Cucurbita maxima (Rimu)	cmawmbB424
Cla97C05G089460	Cucurbita maxima (Rimu)	cmawmbB649
Cla97C05G089460	Cucurbita maxima (Rimu)	cmawmbB651
Cla97C05G089460	Cucurbita moschata (Rifu)	cmowmbB286
Cla97C05G089460	Cucurbita moschata (Rifu)	cmowmbB331
Cla97C05G089460	Cucurbita moschata (Rifu)	cmowmbB404
Cla97C05G089460	Cucurbita moschata (Rifu)	cmowmbB621
Cla97C05G089460	Cucurbita moschata (Rifu)	cmowmbB624
Cla97C05G089460	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G089460	Wild cucumber (PI 183967)	cpiwmbB404
Cla97C05G089460	Wild cucumber (PI 183967)	cpiwmbB491
Cla97C05G089460	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G089460	Cucumber (Chinese Long) v3	cucwmbB400
Cla97C05G089460	Cucumber (Chinese Long) v3	cucwmbB484
Cla97C05G089460	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G089460	Cucumber (Chinese Long) v2	cuwmbB466
Cla97C05G089460	Bottle gourd (USVL1VR-Ls)	lsiwmbB018
Cla97C05G089460	Bottle gourd (USVL1VR-Ls)	lsiwmbB334
Cla97C05G089460	Melon (DHL92) v3.6.1	medwmbB021
Cla97C05G089460	Melon (DHL92) v3.6.1	medwmbB115
Cla97C05G089460	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G089460	Melon (DHL92) v3.5.1	mewmbB024
Cla97C05G089460	Melon (DHL92) v3.5.1	mewmbB124
Cla97C05G089460	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G089460	Watermelon (Charleston Gray)	wcgwmbB109
Cla97C05G089460	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G089460	Watermelon (Charleston Gray)	wcgwmbB272
Cla97C05G089460	Watermelon (97103) v1	wmwmbB206
Cla97C05G089460	Watermelon (97103) v1	wmwmbB269
Cla97C05G089460	Watermelon (97103) v1	wmwmbB405