Cla97C05G089200 (gene) Watermelon (97103) v2

Overview
NameCla97C05G089200
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 7434114 .. 7434407 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGCCCTAACCGAAGACTTAATTCTTCCATTCAGGGCGGTACCGGCAAATCCGTCGGAGCAAGTGTTTTCGTCGGTCATAGCGGCACTCACCCAAGTCTCAACGTTGCTAATGTGCCATAGGAAGTCCTTTTTCTTCGATCCGCTAACGCGCTTCAGTTCCTCCACCGATTTGTTCAGCCGATCTACGGTGTCGCCGACCTCCTCCATACAGTCCTTCAAGGCCGCGTGCTCTCTGGGCTTCAGTCCACTGAACTTCGTCAGTTTCCAGACGAAAGATCGAGCGGATTGA

mRNA sequence

ATGCGAGCCCTAACCGAAGACTTAATTCTTCCATTCAGGGCGGTACCGGCAAATCCGTCGGAGCAAGTGTTTTCGTCGGTCATAGCGGCACTCACCCAAGTCTCAACGTTGCTAATGTGCCATAGGAAGTCCTTTTTCTTCGATCCGCTAACGCGCTTCAGTTCCTCCACCGATTTGTTCAGCCGATCTACGGTGTCGCCGACCTCCTCCATACAGTCCTTCAAGGCCGCGTGCTCTCTGGGCTTCAGTCCACTGAACTTCGTCAGTTTCCAGACGAAAGATCGAGCGGATTGA

Coding sequence (CDS)

ATGCGAGCCCTAACCGAAGACTTAATTCTTCCATTCAGGGCGGTACCGGCAAATCCGTCGGAGCAAGTGTTTTCGTCGGTCATAGCGGCACTCACCCAAGTCTCAACGTTGCTAATGTGCCATAGGAAGTCCTTTTTCTTCGATCCGCTAACGCGCTTCAGTTCCTCCACCGATTTGTTCAGCCGATCTACGGTGTCGCCGACCTCCTCCATACAGTCCTTCAAGGCCGCGTGCTCTCTGGGCTTCAGTCCACTGAACTTCGTCAGTTTCCAGACGAAAGATCGAGCGGATTGA

Protein sequence

MRALTEDLILPFRAVPANPSEQVFSSVIAALTQVSTLLMCHRKSFFFDPLTRFSSSTDLFSRSTVSPTSSIQSFKAACSLGFSPLNFVSFQTKDRAD
Homology
[Close]
BLAST of Cla97C05G089200 vs. NCBI nr
Match: KCW90822.1 (hypothetical protein EUGRSUZ_A02881 [Eucalyptus grandis])

HSP 1 Score: 53.1 bits (126), Expect = 6.0e-04
Identity = 36/55 (65.45%), Postives = 39/55 (70.91%), Query Frame = 0 

Query: 22 QVFSSVIAALTQVSTLLMCHRKSFF--FDPLTRFSSSTDLFSRSTVSPTSSIQSF 75
          QVFSSV AALT VSTLL CH KS+   +DP+   SS  DL  RSTVSP SS QSF
Sbjct: 2  QVFSSVSAALTHVSTLLTCHWKSWALDWDPIP-LSSFIDLLRRSTVSPISSRQSF 55

[Close]
BLAST of Cla97C05G089200 vs. TrEMBL
Match: tr|A0A059DKA5|A0A059DKA5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02881 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.9e-04
Identity = 36/55 (65.45%), Postives = 39/55 (70.91%), Query Frame = 0 

Query: 22 QVFSSVIAALTQVSTLLMCHRKSFF--FDPLTRFSSSTDLFSRSTVSPTSSIQSF 75
          QVFSSV AALT VSTLL CH KS+   +DP+   SS  DL  RSTVSP SS QSF
Sbjct: 2  QVFSSVSAALTHVSTLLTCHWKSWALDWDPIP-LSSFIDLLRRSTVSPISSRQSF 55

The following BLAST results are available for this feature:
BLAST of Cla97C05G089200 vs. NCBI nr
Match NameE-valueIdentityDescription
KCW90822.16.0e-0465.45hypothetical protein EUGRSUZ_A02881 [Eucalyptus grandis][more]
BLAST of Cla97C05G089200 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A059DKA5|A0A059DKA5_EUCGR3.9e-0465.45Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02881 PE=4 SV... [more]
BLAST of Cla97C05G089200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G089200 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G089200.1Cla97C05G089200.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G089200Watermelon (97103) v2wmbwmbB023
Cla97C05G089200Silver-seed gourdcarwmbB0398
Cla97C05G089200Silver-seed gourdcarwmbB0743
Cla97C05G089200Silver-seed gourdcarwmbB0910
Cla97C05G089200Silver-seed gourdcarwmbB0969
Cla97C05G089200Cucumber (Gy14) v2cgybwmbB196
Cla97C05G089200Cucumber (Gy14) v2cgybwmbB367
Cla97C05G089200Cucumber (Gy14) v1cgywmbB452
Cla97C05G089200Cucumber (Gy14) v1cgywmbB522
Cla97C05G089200Cucurbita maxima (Rimu)cmawmbB304
Cla97C05G089200Cucurbita maxima (Rimu)cmawmbB346
Cla97C05G089200Cucurbita maxima (Rimu)cmawmbB649
Cla97C05G089200Cucurbita maxima (Rimu)cmawmbB651
Cla97C05G089200Cucurbita maxima (Rimu)cmawmbB767
Cla97C05G089200Cucurbita moschata (Rifu)cmowmbB286
Cla97C05G089200Cucurbita moschata (Rifu)cmowmbB331
Cla97C05G089200Cucurbita moschata (Rifu)cmowmbB621
Cla97C05G089200Cucurbita moschata (Rifu)cmowmbB624
Cla97C05G089200Cucurbita moschata (Rifu)cmowmbB739
Cla97C05G089200Wild cucumber (PI 183967)cpiwmbB209
Cla97C05G089200Wild cucumber (PI 183967)cpiwmbB404
Cla97C05G089200Cucumber (Chinese Long) v3cucwmbB206
Cla97C05G089200Cucumber (Chinese Long) v3cucwmbB400
Cla97C05G089200Cucumber (Chinese Long) v2cuwmbB204
Cla97C05G089200Bottle gourd (USVL1VR-Ls)lsiwmbB334
Cla97C05G089200Melon (DHL92) v3.6.1medwmbB021
Cla97C05G089200Melon (DHL92) v3.6.1medwmbB423
Cla97C05G089200Melon (DHL92) v3.5.1mewmbB024
Cla97C05G089200Melon (DHL92) v3.5.1mewmbB434
Cla97C05G089200Watermelon (Charleston Gray)wcgwmbB109
Cla97C05G089200Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G089200Watermelon (97103) v1wmwmbB206
Cla97C05G089200Watermelon (97103) v1wmwmbB269
Cla97C05G089200Wax gourdwgowmbB178