Cla97C05G088050 (gene) Watermelon (97103) v2

NameCla97C05G088050
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 6119089 .. 6119671 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCCACGCGCTTCTCCGACGAATAGACCCACCAGCAGCGACAACTCGACCGAACCCAACATCGGGAACTTCCCGAGAACCTCCATCCACCGACGGGAATCCGGCAACCCACACGAAGTTTCGGATCCAGGGAATAGCTTCAGATCCGGCGAGGCAGAGCGGACCGTGGATGAAGCCCCACGAAGAGTACACGCGCGCACTTCCGATCGACGGCCACCCACGACCGCAGTAGACTCCGGTGCTTCACGGCGATGGCCGATTTTCCTGCACCGAAACAGTGGCCTTCAAGGTAAAGAGGGCTGCTTCATCGAAGAAGATGAAGAGAAGATTGGAGGGAGAAGTCGAAGTCGAAGAAGAAGTGGAGAAAAGAAATTCGGAAAAGTGATGGGCCCATTCATTATTATTATTATTATTTTATTTTCTCTGTTTAATATTTATCCTAAAAAGTTCTATTAAGAAAAAGAATTTTTTTTTTTTATCAGGCGCTCGCAATATGATAGTCCGAAGGAAACGGCCAGAAATGGAAGAATCTGATCGATCGCAGCCGTCCGATGTGTTCTCTCTCTACAGTTCCCGGTGA

mRNA sequence

ATGCAGCCACGCGCTTCTCCGACGAATAGACCCACCAGCAGCGACAACTCGACCGAACCCAACATCGGGAACTTCCCGAGAACCTCCATCCACCGACGGGAATCCGGCAACCCACACGAAGTTTCGGATCCAGGGAATAGCTTCAGATCCGGCGAGGCAGAGCGGACCGTGGATGAAGCCCCACGAAGAGTACACGCGCGCACTTCCGATCGACGGCCACCCACGACCGCAGTAGACTCCGGTGCTTCACGGCGATGGCCGATTTTCCTGCACCGAAACAGTGGCCTTCAAGGTAAAGAGGGCTGCTTCATCGAAGAAGATGAAGAGAAGATTGGAGGGAGAAGTCGAAGTCGAAGAAGAAGCGCTCGCAATATGATAGTCCGAAGGAAACGGCCAGAAATGGAAGAATCTGATCGATCGCAGCCGTCCGATGTGTTCTCTCTCTACAGTTCCCGGTGA

Coding sequence (CDS)

ATGCAGCCACGCGCTTCTCCGACGAATAGACCCACCAGCAGCGACAACTCGACCGAACCCAACATCGGGAACTTCCCGAGAACCTCCATCCACCGACGGGAATCCGGCAACCCACACGAAGTTTCGGATCCAGGGAATAGCTTCAGATCCGGCGAGGCAGAGCGGACCGTGGATGAAGCCCCACGAAGAGTACACGCGCGCACTTCCGATCGACGGCCACCCACGACCGCAGTAGACTCCGGTGCTTCACGGCGATGGCCGATTTTCCTGCACCGAAACAGTGGCCTTCAAGGTAAAGAGGGCTGCTTCATCGAAGAAGATGAAGAGAAGATTGGAGGGAGAAGTCGAAGTCGAAGAAGAAGCGCTCGCAATATGATAGTCCGAAGGAAACGGCCAGAAATGGAAGAATCTGATCGATCGCAGCCGTCCGATGTGTTCTCTCTCTACAGTTCCCGGTGA

Protein sequence

MQPRASPTNRPTSSDNSTEPNIGNFPRTSIHRRESGNPHEVSDPGNSFRSGEAERTVDEAPRRVHARTSDRRPPTTAVDSGASRRWPIFLHRNSGLQGKEGCFIEEDEEKIGGRSRSRRRSARNMIVRRKRPEMEESDRSQPSDVFSLYSSR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G088050.1Cla97C05G088050.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..152

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G088050Watermelon (97103) v2wmbwmbB137
Cla97C05G088050Silver-seed gourdcarwmbB0069
Cla97C05G088050Silver-seed gourdcarwmbB0287
Cla97C05G088050Silver-seed gourdcarwmbB0734
Cla97C05G088050Silver-seed gourdcarwmbB1003
Cla97C05G088050Cucumber (Gy14) v2cgybwmbB196
Cla97C05G088050Cucumber (Gy14) v2cgybwmbB442
Cla97C05G088050Cucumber (Gy14) v1cgywmbB452
Cla97C05G088050Cucurbita maxima (Rimu)cmawmbB001
Cla97C05G088050Cucurbita maxima (Rimu)cmawmbB263
Cla97C05G088050Cucurbita maxima (Rimu)cmawmbB366
Cla97C05G088050Cucurbita maxima (Rimu)cmawmbB856
Cla97C05G088050Cucurbita maxima (Rimu)cmawmbB914
Cla97C05G088050Cucurbita moschata (Rifu)cmowmbB243
Cla97C05G088050Cucurbita moschata (Rifu)cmowmbB351
Cla97C05G088050Cucurbita moschata (Rifu)cmowmbB833
Cla97C05G088050Cucurbita moschata (Rifu)cmowmbB887
Cla97C05G088050Wild cucumber (PI 183967)cpiwmbB209
Cla97C05G088050Wild cucumber (PI 183967)cpiwmbB490
Cla97C05G088050Cucumber (Chinese Long) v3cucwmbB206
Cla97C05G088050Cucumber (Chinese Long) v3cucwmbB483
Cla97C05G088050Cucumber (Chinese Long) v2cuwmbB204
Cla97C05G088050Cucumber (Chinese Long) v2cuwmbB465
Cla97C05G088050Bottle gourd (USVL1VR-Ls)lsiwmbB015
Cla97C05G088050Bottle gourd (USVL1VR-Ls)lsiwmbB330
Cla97C05G088050Melon (DHL92) v3.6.1medwmbB114
Cla97C05G088050Melon (DHL92) v3.6.1medwmbB423
Cla97C05G088050Melon (DHL92) v3.5.1mewmbB123
Cla97C05G088050Melon (DHL92) v3.5.1mewmbB434
Cla97C05G088050Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G088050Watermelon (Charleston Gray)wcgwmbB269
Cla97C05G088050Watermelon (97103) v1wmwmbB206
Cla97C05G088050Watermelon (97103) v1wmwmbB402
Cla97C05G088050Wax gourdwgowmbB076
Cla97C05G088050Wax gourdwgowmbB178