Cla97C05G083540 (gene) Watermelon (97103) v2

NameCla97C05G083540
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 2707762 .. 2709907 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGTGATAGTGAATGTGAAGAGCAAGGATTTCCAGAGAAAACGGGCGAAAATCAAGGTGACAGAGAAACTATGGAGGATTCTAAAGACAGAAGGTATGGCGGCAACGAAACGAGGTCAAAGCGGAGTCAGCCTTTTTCCAGGTGATTCAAAACGGATTTTCAATTTTGCCAAATATTAATATTTAAATTTTAGGGCAAAAATCAAATTAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAAATCAATTTTAAATCCCCTCCATTTAGTAACCATTTCATATTTTGATTTTAGTTTTTGAGAATTAAGCTTATTTTATTCATATTGGTAAAAATTAGACAATAAATGAAAAAATTTGGAAGTGGAGATAGTGTCTATAGGTTTAATTTTTTAAAATAAAAACTAAAAATGAAATGGTTATCAAACTAGGCTTAAATTTGTATAGTTGTATTGATTTTAATCCTAAACTTCAAATTTCATTCATTCTAATTACACTTCAGACTTAAATAAGTTTTAGGGTCACAAAATAAGTCAACTTAATTACAAATATAACAAAATATTGATTTATCAATGATAGACTACTACCATTTATAACTGATAAATATGAACATTTTGCTATATTCTAAAATATTTTCAGCCGTTTTGTCATTCGAAATAATTACCTAAAGTTTTGATTTTAAAAACATGGTAGGATTTTAAATTGAGAAAATAAATTTCTAAAATTGGCGTTAGAGATTAAAAAAATGGTTGAATTTATGAATTTTAGTAGTGTTAAATTTATAAATTTGTGATGTTTTGATATTCTTCCTCAGAATTGTAAAATTGAAATATAATATAAAATTTTAATTTTCTTTATAGAAGTTGGTTTTCCCTAAGCTGGGTGGAAATATGGAGATGAAGATTATAATTTAAAGGTAAAATACATTTTTGGTCCTTGAGGTTTGAACTTAGTGTTTATTTGGTTCTAAAGTTTCAAAATGAACACTTTAGCCTCCAAAAATTTGGTAAATAATTCTAAATAGTCCTTTGATTCTTAGTTGACTAAGGAAAAATGATATGGAGATTAAGTTATTGATTATATGGTAAATTGAAGAACTTATTAATTTAATATTATAATTATATTGTTGAGGTGGTTGATTCTCCCTCACCTTCTATTCTCATTCCCCTCTTCTTCATCCCTCACGGACCAAAAGTGTATTTATAATATTAATATTTAAATTTGACATATATAGTTTTAAATTAATAAAAAAAAAATTGATCTTTATAGTATTGCATACAATACATAAATGATAAATTAGTGGTGGAGTAGTTACAAAGACAACTATTTTCTATTGAGTCAAAGGTTCAAATCTACTCTTTGTTATACCAAAAAAAAAAAAACATAAACAATTTGAAAACTATGTACTAAAAATAGCATGAAGTATAAATTTTAGAAATAAAATGGTAAATTTCAAGCATCTTAGTAAATAAATATCCAATGAATCAGACACGCAAAAAGAAAAACAATAAATTCAAGGCTCATTATAGACAATAAAACATTATCATTCAATTGTTTTTTAAGACATCAAAATTTTGATGGACAGAAAAAGAAAATTTCATGAACATTTTATCAATTCAAAAAAAGAAGAAAACGTCAACTCTGAATGAAGCTTAATGATTATAATGCACCAATTACTATCTCAAAAAAGTCAATAGTTGAATTTCTGAAACCTTTTTTTAGCTAAGCTAAAGAAAAAATAAAAGAAGGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAATTAATCTAAGGTTTCATTGACTAGGGACACTCATCATTGTCAAACAACCCAAATCATATCGCTTTAATTATGTTATTTTCTCTAGAGAGGCATATTCCCTAGTTTTCTGGATAAGTGATTCCATAAAATGATAATAACCGCAACGACTTTTAACAAAAATCTTATTGTTTTCAAATTAGGAAAATTAACCAAAGTTTTACTGTTTATTCGTATAGATAGCGATAAATTACTACTAGAGTTGAGGATTCGAATCTTCCACCTTTAAATAAAAAGTTTTGTCAATCACCATCGAACTAAGCTCGTTTGGTTAATTTTCTTCTTATTATTATTAGTTCAAGGATAGAGGATCTGAAACTCTAA

mRNA sequence

ATGGGGAGTGATAGTGAATGTGAAGAGCAAGGATTTCCAGAGAAAACGGGCGAAAATCAAGGTGACAGAGAAACTATGGAGGATTCTAAAGACAGAAGGTATGGCGGCAACGAAACGAGGTCAAAGCGGAGTCAGCCTTTTTCCAGTTCAAGGATAGAGGATCTGAAACTCTAA

Coding sequence (CDS)

ATGGGGAGTGATAGTGAATGTGAAGAGCAAGGATTTCCAGAGAAAACGGGCGAAAATCAAGGTGACAGAGAAACTATGGAGGATTCTAAAGACAGAAGGTATGGCGGCAACGAAACGAGGTCAAAGCGGAGTCAGCCTTTTTCCAGTTCAAGGATAGAGGATCTGAAACTCTAA

Protein sequence

MGSDSECEEQGFPEKTGENQGDRETMEDSKDRRYGGNETRSKRSQPFSSSRIEDLKL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G083540.1Cla97C05G083540.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..39

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G083540Watermelon (97103) v2wmbwmbB054
Cla97C05G083540Watermelon (97103) v2wmbwmbB137
Cla97C05G083540Silver-seed gourdcarwmbB0229
Cla97C05G083540Silver-seed gourdcarwmbB1008
Cla97C05G083540Silver-seed gourdcarwmbB0647
Cla97C05G083540Silver-seed gourdcarwmbB1131
Cla97C05G083540Cucumber (Gy14) v2cgybwmbB196
Cla97C05G083540Cucumber (Gy14) v1cgywmbB452
Cla97C05G083540Cucumber (Gy14) v1cgywmbB542
Cla97C05G083540Cucurbita maxima (Rimu)cmawmbB263
Cla97C05G083540Cucurbita maxima (Rimu)cmawmbB366
Cla97C05G083540Cucurbita maxima (Rimu)cmawmbB856
Cla97C05G083540Cucurbita moschata (Rifu)cmowmbB243
Cla97C05G083540Cucurbita moschata (Rifu)cmowmbB350
Cla97C05G083540Cucurbita moschata (Rifu)cmowmbB833
Cla97C05G083540Wild cucumber (PI 183967)cpiwmbB209
Cla97C05G083540Wild cucumber (PI 183967)cpiwmbB215
Cla97C05G083540Cucumber (Chinese Long) v3cucwmbB206
Cla97C05G083540Cucumber (Chinese Long) v2cuwmbB204
Cla97C05G083540Bottle gourd (USVL1VR-Ls)lsiwmbB015
Cla97C05G083540Bottle gourd (USVL1VR-Ls)lsiwmbB333
Cla97C05G083540Bottle gourd (USVL1VR-Ls)lsiwmbB337
Cla97C05G083540Melon (DHL92) v3.6.1medwmbB327
Cla97C05G083540Melon (DHL92) v3.6.1medwmbB423
Cla97C05G083540Melon (DHL92) v3.5.1mewmbB340
Cla97C05G083540Melon (DHL92) v3.5.1mewmbB434
Cla97C05G083540Watermelon (Charleston Gray)wcgwmbB020
Cla97C05G083540Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G083540Watermelon (Charleston Gray)wcgwmbB269
Cla97C05G083540Watermelon (97103) v1wmwmbB206
Cla97C05G083540Wax gourdwgowmbB041
Cla97C05G083540Wax gourdwgowmbB180