Cla97C05G081440 (gene) Watermelon (97103) v2

Overview
NameCla97C05G081440
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 1152150 .. 1152959 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGGAATCTACTGGAAATGAAAACAATTCTAAAGAAGAGCAAGATTTGAGAGAAGGAAATGGAGAAGCCATGGAATCGAGTTCAAGTTCGTCATTTCTACAAGATTTGAACCTTCTATTTGTGCTTCTTTCATTGATTTCTCCAGATTCAAATGAAGATTCAAATGTTGGCAATGGTGAATCAATGAGAATGAAAGAACTTGAAGTTAGTACAACTTACAATATTGCACGATCAAGTGTAAGAAAGAAAGATGTTATTGAAGCCAAGCATGAAAGTCGTCGACGATTACCTCAAAAATCTTATACAACAGTAAAGGATCACAGGTTCTCCTCTATATACAAATTTCTAATCAATTTTCATTCAATTATAAATTTGATTCCTATGGTTTGAAAAAAAGTTAAAGTTTAATCTTTATGGTTTTAAAAGTTAGTATTTAGTCCCTATGATTTAATAAAATCTTAAAAATAGTTCATAATGTAGGAACTATTTATGAAGTTTTTATGGACTAAATTTTAATTATAAACCATAGGAATAAATTCGACCAAATTTTCAATTTAACCATCAATTTTTTCTGTAAACACTTCTGGAAAAATTAATAATTTAAAAGGTGCTTAGTATGGCTTTCATTTTAGATGATAAAAAATGTAATGTATTTTAGATAAATTTGGATTGATTTAAAAACTGTTTTTGAATAAATTACACATGATAAATAAATTATCCAGAAATGAGTTTTTAATGAATTAAATGAAACTTTTTTAAAGCTATTATTATTTTGTTCTTTACAGGCATGGGAGAAAAATGTGA

mRNA sequence

ATGATGATGGAATCTACTGGAAATGAAAACAATTCTAAAGAAGAGCAAGATTTGAGAGAAGGAAATGGAGAAGCCATGGAATCGAGTTCAAGTTCGTCATTTCTACAAGATTTGAACCTTCTATTTGTGCTTCTTTCATTGATTTCTCCAGATTCAAATGAAGATTCAAATGTTGGCAATGGTGAATCAATGAGAATGAAAGAACTTGAAGTTAGTACAACTTACAATATTGCACGATCAAGTGTAAGAAAGAAAGATGTTATTGAAGCCAAGCATGAAAGTCGTCGACGATTACCTCAAAAATCTTATACAACAGTAAAGGATCACAGGCATGGGAGAAAAATGTGA

Coding sequence (CDS)

ATGATGATGGAATCTACTGGAAATGAAAACAATTCTAAAGAAGAGCAAGATTTGAGAGAAGGAAATGGAGAAGCCATGGAATCGAGTTCAAGTTCGTCATTTCTACAAGATTTGAACCTTCTATTTGTGCTTCTTTCATTGATTTCTCCAGATTCAAATGAAGATTCAAATGTTGGCAATGGTGAATCAATGAGAATGAAAGAACTTGAAGTTAGTACAACTTACAATATTGCACGATCAAGTGTAAGAAAGAAAGATGTTATTGAAGCCAAGCATGAAAGTCGTCGACGATTACCTCAAAAATCTTATACAACAGTAAAGGATCACAGGCATGGGAGAAAAATGTGA

Protein sequence

MMMESTGNENNSKEEQDLREGNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNVGNGESMRMKELEVSTTYNIARSSVRKKDVIEAKHESRRRLPQKSYTTVKDHRHGRKM
Homology
[Close]
BLAST of Cla97C05G081440 vs. NCBI nr
Match: XP_011650727.1 (PREDICTED: uncharacterized protein LOC105434812 [Cucumis sativus] >KGN56466.1 hypothetical protein Csa_3G120450 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 6.6e-34
Identity = 84/117 (71.79%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 2   MMESTGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNV 61
           M+E  GNEN+ K++Q++RE   NGE  +ESSSSSSFL DLNLLFV LSLISP++NEDSN 
Sbjct: 1   MVEGMGNENDFKDKQEMREDHNNGEDIVESSSSSSFLPDLNLLFVFLSLISPNTNEDSND 60

Query: 62  GNGESMRMKELEVSTTYNIARSSVRKKDVIEAKHESRRRLPQKSYTTVKDHRHGRKM 116
           GNG SM+MKE+E STTYNIA+SS+RKKDVIEA+HESRR++PQ+ +TT+KDHRHGRKM
Sbjct: 61  GNGVSMKMKEIEDSTTYNIAKSSIRKKDVIEAQHESRRKVPQRLHTTIKDHRHGRKM 117

[Close]
BLAST of Cla97C05G081440 vs. TrEMBL
Match: tr|A0A0A0L8Q3|A0A0A0L8Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120450 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.3e-34
Identity = 84/117 (71.79%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 2   MMESTGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNV 61
           M+E  GNEN+ K++Q++RE   NGE  +ESSSSSSFL DLNLLFV LSLISP++NEDSN 
Sbjct: 1   MVEGMGNENDFKDKQEMREDHNNGEDIVESSSSSSFLPDLNLLFVFLSLISPNTNEDSND 60

Query: 62  GNGESMRMKELEVSTTYNIARSSVRKKDVIEAKHESRRRLPQKSYTTVKDHRHGRKM 116
           GNG SM+MKE+E STTYNIA+SS+RKKDVIEA+HESRR++PQ+ +TT+KDHRHGRKM
Sbjct: 61  GNGVSMKMKEIEDSTTYNIAKSSIRKKDVIEAQHESRRKVPQRLHTTIKDHRHGRKM 117

The following BLAST results are available for this feature:
BLAST of Cla97C05G081440 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011650727.16.6e-3471.79PREDICTED: uncharacterized protein LOC105434812 [Cucumis sativus] >KGN56466.1 hy... [more]
BLAST of Cla97C05G081440 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8Q3|A0A0A0L8Q3_CUCSA4.3e-3471.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120450 PE=4 SV=1[more]
BLAST of Cla97C05G081440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G081440 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G081440.1Cla97C05G081440.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..106

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G081440Csa3G120450Cucumber (Chinese Long) v2cuwmbB204
Cla97C05G081440MELO3C006067Melon (DHL92) v3.5.1mewmbB434
Cla97C05G081440CSPI03G08340Wild cucumber (PI 183967)cpiwmbB209
Cla97C05G081440CmaCh06G010300Cucurbita maxima (Rimu)cmawmbB860
Cla97C05G081440Lsi05G020840Bottle gourd (USVL1VR-Ls)lsiwmbB333
Cla97C05G081440CsGy3G008460Cucumber (Gy14) v2cgybwmbB196
Cla97C05G081440MELO3C006067.2Melon (DHL92) v3.6.1medwmbB423
Cla97C05G081440Carg20867Silver-seed gourdcarwmbB1047
Cla97C05G081440CsaV3_3G008460Cucumber (Chinese Long) v3cucwmbB206
Cla97C05G081440Bhi01G000298Wax gourdwgowmbB191
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G081440Watermelon (97103) v2wmbwmbB019
Cla97C05G081440Watermelon (97103) v2wmbwmbB016
Cla97C05G081440Watermelon (97103) v2wmbwmbB130
Cla97C05G081440Watermelon (97103) v2wmbwmbB136
Cla97C05G081440Silver-seed gourdcarwmbB0513
Cla97C05G081440Silver-seed gourdcarwmbB0627
Cla97C05G081440Silver-seed gourdcarwmbB1041
Cla97C05G081440Cucumber (Gy14) v2cgybwmbB294
Cla97C05G081440Cucumber (Gy14) v2cgybwmbB363
Cla97C05G081440Cucumber (Gy14) v2cgybwmbB364
Cla97C05G081440Cucumber (Gy14) v2cgybwmbB444
Cla97C05G081440Cucumber (Gy14) v1cgywmbB144
Cla97C05G081440Cucumber (Gy14) v1cgywmbB226
Cla97C05G081440Cucumber (Gy14) v1cgywmbB381
Cla97C05G081440Cucumber (Gy14) v1cgywmbB452
Cla97C05G081440Cucumber (Gy14) v1cgywmbB524
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB000
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB263
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB309
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB344
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB345
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB429
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB650
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB652
Cla97C05G081440Cucurbita maxima (Rimu)cmawmbB761
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB243
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB291
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB328
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB330
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB410
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB623
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB625
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB733
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB833
Cla97C05G081440Cucurbita moschata (Rifu)cmowmbB889
Cla97C05G081440Wild cucumber (PI 183967)cpiwmbB321
Cla97C05G081440Wild cucumber (PI 183967)cpiwmbB399
Cla97C05G081440Wild cucumber (PI 183967)cpiwmbB400
Cla97C05G081440Wild cucumber (PI 183967)cpiwmbB492
Cla97C05G081440Cucumber (Chinese Long) v3cucwmbB319
Cla97C05G081440Cucumber (Chinese Long) v3cucwmbB395
Cla97C05G081440Cucumber (Chinese Long) v3cucwmbB396
Cla97C05G081440Cucumber (Chinese Long) v2cuwmbB311
Cla97C05G081440Cucumber (Chinese Long) v2cuwmbB381
Cla97C05G081440Cucumber (Chinese Long) v2cuwmbB382
Cla97C05G081440Bottle gourd (USVL1VR-Ls)lsiwmbB016
Cla97C05G081440Bottle gourd (USVL1VR-Ls)lsiwmbB023
Cla97C05G081440Bottle gourd (USVL1VR-Ls)lsiwmbB331
Cla97C05G081440Melon (DHL92) v3.6.1medwmbB024
Cla97C05G081440Melon (DHL92) v3.6.1medwmbB025
Cla97C05G081440Melon (DHL92) v3.6.1medwmbB117
Cla97C05G081440Melon (DHL92) v3.6.1medwmbB436
Cla97C05G081440Melon (DHL92) v3.6.1medwmbB476
Cla97C05G081440Melon (DHL92) v3.5.1mewmbB027
Cla97C05G081440Melon (DHL92) v3.5.1mewmbB028
Cla97C05G081440Melon (DHL92) v3.5.1mewmbB126
Cla97C05G081440Melon (DHL92) v3.5.1mewmbB437
Cla97C05G081440Melon (DHL92) v3.5.1mewmbB483
Cla97C05G081440Watermelon (Charleston Gray)wcgwmbB105
Cla97C05G081440Watermelon (Charleston Gray)wcgwmbB107
Cla97C05G081440Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G081440Watermelon (Charleston Gray)wcgwmbB231
Cla97C05G081440Watermelon (Charleston Gray)wcgwmbB268
Cla97C05G081440Watermelon (97103) v1wmwmbB206
Cla97C05G081440Watermelon (97103) v1wmwmbB210
Cla97C05G081440Watermelon (97103) v1wmwmbB262
Cla97C05G081440Watermelon (97103) v1wmwmbB266
Cla97C05G081440Wax gourdwgowmbB082
Cla97C05G081440Wax gourdwgowmbB196