Cla97C05G081070 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G081070
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	cyclic nucleotide-gated ion channel 1-like
Location	Cla97Chr05 : 884849 .. 885556 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTAACCCAAGAGATGCCGAGCATTGGATGGCACATCGTATGCTCCCAGAGGAGTTGAGGCAGCATATACGACGATATGATCAGTATAAATGGCAGCTAAATAGGGGAGTTAAGGAAGAGGAACTCATTAGTAACCTTCCTAAAGACCTCAGGAGGGACATCAAACACCACCTTTGCTTGGCCCATCTTAAGAAAGTGAGTTCTTTTCCTTCAACTTTGGCACATTCCACCTGTGAAATTCTCAACATTTGTTAACTCAGAATGCTTTAGGTGCTGCTTTTTAGTAGCATGGATAAACAACTGTTGGACTCGATGCGTGAATATCTCCAGCCTGTGTTATTCACAAAAAGAGGTTCATTCTGCAAGAGGTTGACCCAATTGATATGATGCTATTTATCATGAAAGGAAAGCTGGCTACCATTATTACCTGGGGTTGGGAAAAGCGACCAGTACGTGGTCACTCTTAACGCTGGTGACTTTTGTGGCGAAGAGCTAGTTCAATGGGCAATGAATACCACCTCCACTTCTCTTCCCATTTCAAACAGAACAATTAATACTCTAATTGAGGTTGAAGCCTTTGCTCTAAAGGCTAATGAGCTGAAATTTGTAACTAGACAGTACCATTTCCAGCGCCTCAATAGCACGCAATTCCAACTCTCAGTGAGGCATGTTCTTACTGAACTTACACATCAATTGTTCTAG

mRNA sequence

ATGAAAATTAACCCAAGAGATGCCGAGCATTGGATGGCACATCGTATGCTCCCAGAGGAGTTGAGGCAGCATATACGACGATATGATCAGTATAAATGGCAGCTAAATAGGGGAGTTAAGGAAGAGGAACTCATTAGTAACCTTCCTAAAGACCTCAGGAGGGACATCAAACACCACCTTTGCTTGGCCCATCTTAAGAAAGTGCTGCTTTTTAGTAGCATGGATAAACAACTGTTGGACTCGATGCGTGAATATCTCCAGCCTGAAAGCTGGCTACCATTATTACCTGGGGTTGGGAAAAGCGACCAGTACGTGGTCACTCTTAACGCTGGTGACTTTTGTGGCGAAGAGCTAGTTCAATGGGCAATGAATACCACCTCCACTTCTCTTCCCATTTCAAACAGAACAATTAATACTCTAATTGAGGTTGAAGCCTTTGCTCTAAAGGCTAATGAGCTGAAATTTGTAACTAGACAGTACCATTTCCAGCGCCTCAATAGCACGCAATTCCAACTCTCAGTGAGGCATGTTCTTACTGAACTTACACATCAATTGTTCTAG

Coding sequence (CDS)

ATGAAAATTAACCCAAGAGATGCCGAGCATTGGATGGCACATCGTATGCTCCCAGAGGAGTTGAGGCAGCATATACGACGATATGATCAGTATAAATGGCAGCTAAATAGGGGAGTTAAGGAAGAGGAACTCATTAGTAACCTTCCTAAAGACCTCAGGAGGGACATCAAACACCACCTTTGCTTGGCCCATCTTAAGAAAGTGCTGCTTTTTAGTAGCATGGATAAACAACTGTTGGACTCGATGCGTGAATATCTCCAGCCTGAAAGCTGGCTACCATTATTACCTGGGGTTGGGAAAAGCGACCAGTACGTGGTCACTCTTAACGCTGGTGACTTTTGTGGCGAAGAGCTAGTTCAATGGGCAATGAATACCACCTCCACTTCTCTTCCCATTTCAAACAGAACAATTAATACTCTAATTGAGGTTGAAGCCTTTGCTCTAAAGGCTAATGAGCTGAAATTTGTAACTAGACAGTACCATTTCCAGCGCCTCAATAGCACGCAATTCCAACTCTCAGTGAGGCATGTTCTTACTGAACTTACACATCAATTGTTCTAG

Protein sequence

MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHLCLAHLKKVLLFSSMDKQLLDSMREYLQPESWLPLLPGVGKSDQYVVTLNAGDFCGEELVQWAMNTTSTSLPISNRTINTLIEVEAFALKANELKFVTRQYHFQRLNSTQFQLSVRHVLTELTHQLF

Homology

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BLAST of Cla97C05G081070 vs. NCBI nr
Match: XP_004134306.2 (PREDICTED: cyclic nucleotide-gated ion channel 1 [Cucumis sativus] >KGN56431.1 hypothetical protein Csa_3G119640 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 138/199 (69.35%), Postives = 150/199 (75.38%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLPEELR+ IRRYDQYKWQLNRGVKEEELISNLPKDL RDIK HL
Sbjct: 395 MRINRRDAEHWMAHRMLPEELRRRIRRYDQYKWQLNRGVKEEELISNLPKDLMRDIKQHL 454

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP-----------------------ESWLPLLPG 120
           CLAHLKKV LFSSMDKQLLDSM EYL+P                       +  L  L  
Sbjct: 455 CLAHLKKVPLFSSMDKQLLDSMCEYLKPVLFTKKSFILQEGDTIDMMLFIMKGELATLTN 514

Query: 121 VG-KSDQYVVTLNAGDFCGEELVQWAMNTTSTSLPISNRTINTLIEVEAFALKANELKFV 176
            G K + Y+ TL AGDFCGEELVQWAM+ +ST LPISNRTI TL EVEAFALK+NEL+ V
Sbjct: 515 CGWKDNLYLGTLKAGDFCGEELVQWAMDPSSTCLPISNRTIKTLTEVEAFALKSNELESV 574

[Close]

BLAST of Cla97C05G081070 vs. NCBI nr
Match: XP_008437903.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 2.6e-64
Identity = 137/199 (68.84%), Postives = 149/199 (74.87%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLPEELRQ IRRYDQYKWQLNRGVKEEELI NLPKDLRRDIK HL
Sbjct: 395 MRINRRDAEHWMAHRMLPEELRQRIRRYDQYKWQLNRGVKEEELICNLPKDLRRDIKQHL 454

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----------------ESWLPLLPGV------ 120
           CLAHLKKV LFS MDKQLLDSM EYL+P                +  L ++ G       
Sbjct: 455 CLAHLKKVPLFSGMDKQLLDSMCEYLKPVLFTKKSFILQEGDTIDMMLFIMKGELATITT 514

Query: 121 --GKSDQYVVTLNAGDFCGEELVQWAMNTTSTSLPISNRTINTLIEVEAFALKANELKFV 176
              K+D Y+ TL AGDFCGEELVQWAM+ +ST LPISNRTI TL EVEAFAL  NEL+ V
Sbjct: 515 CGWKNDPYLGTLKAGDFCGEELVQWAMDPSSTCLPISNRTIKTLTEVEAFALNGNELESV 574

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BLAST of Cla97C05G081070 vs. NCBI nr
Match: XP_022980030.1 (cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucurbita maxima] >XP_022980031.1 cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucurbita maxima] >XP_022980033.1 cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucurbita maxima] >XP_022980034.1 cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 135/199 (67.84%), Postives = 149/199 (74.87%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLPE+LRQ IRRYDQYKWQLNRGVKEEELI NLPKDLRRDIK HL
Sbjct: 409 MRINRRDAEHWMAHRMLPEDLRQRIRRYDQYKWQLNRGVKEEELIGNLPKDLRRDIKRHL 468

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----------------ESWLPLLPGV------ 120
           C A LKKV LFS MDKQLLD+M EYL+P                +  L ++ G       
Sbjct: 469 CYALLKKVPLFSGMDKQLLDAMCEYLKPVLFTEKSFILQEGDPIDMMLFIMKGKLATIIT 528

Query: 121 --GKSDQYVVTLNAGDFCGEELVQWAMNTTSTSLPISNRTINTLIEVEAFALKANELKFV 176
              K+D +   LNAGDFCGEELVQWA + TSTSLPIS+RT+ +L EVEAFALKANELK V
Sbjct: 529 YGWKNDTFSAVLNAGDFCGEELVQWARDPTSTSLPISSRTVKSLTEVEAFALKANELKSV 588

[Close]

BLAST of Cla97C05G081070 vs. NCBI nr
Match: XP_022980035.1 (cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 135/199 (67.84%), Postives = 149/199 (74.87%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLPE+LRQ IRRYDQYKWQLNRGVKEEELI NLPKDLRRDIK HL
Sbjct: 379 MRINRRDAEHWMAHRMLPEDLRQRIRRYDQYKWQLNRGVKEEELIGNLPKDLRRDIKRHL 438

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----------------ESWLPLLPGV------ 120
           C A LKKV LFS MDKQLLD+M EYL+P                +  L ++ G       
Sbjct: 439 CYALLKKVPLFSGMDKQLLDAMCEYLKPVLFTEKSFILQEGDPIDMMLFIMKGKLATIIT 498

Query: 121 --GKSDQYVVTLNAGDFCGEELVQWAMNTTSTSLPISNRTINTLIEVEAFALKANELKFV 176
              K+D +   LNAGDFCGEELVQWA + TSTSLPIS+RT+ +L EVEAFALKANELK V
Sbjct: 499 YGWKNDTFSAVLNAGDFCGEELVQWARDPTSTSLPISSRTVKSLTEVEAFALKANELKSV 558

[Close]

BLAST of Cla97C05G081070 vs. NCBI nr
Match: XP_008437907.1 (PREDICTED: cyclic nucleotide-gated ion channel 1 [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 136/201 (67.66%), Postives = 151/201 (75.12%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLP+ELR  IRRYDQYKWQLNRGVKEEELISNLPKDLRRDIK HL
Sbjct: 405 MRINRRDAEHWMAHRMLPDELRYRIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKRHL 464

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----------------ESWLPLLPG-----VG 120
           CLA LKKV LFSSMDKQLLD+M EYL+P                +  L ++ G     +G
Sbjct: 465 CLAQLKKVPLFSSMDKQLLDAMCEYLRPVLFTEKSFIMQEGDPIDMMLFIMKGKLATIIG 524

Query: 121 ---KSDQYVVTLNAGDFCGEELVQWAMN--TTSTSLPISNRTINTLIEVEAFALKANELK 176
              K+D Y  TLNAGDFCGEELV WAM+  T ++SLPIS RT+ TL EVEAFALKANELK
Sbjct: 525 CDWKNDLYSATLNAGDFCGEELVHWAMDPTTNTSSLPISKRTVETLTEVEAFALKANELK 584

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BLAST of Cla97C05G081070 vs. TrEMBL
Match: tr|A0A0A0L8L1|A0A0A0L8L1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119640 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64
Identity = 138/199 (69.35%), Postives = 150/199 (75.38%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLPEELR+ IRRYDQYKWQLNRGVKEEELISNLPKDL RDIK HL
Sbjct: 395 MRINRRDAEHWMAHRMLPEELRRRIRRYDQYKWQLNRGVKEEELISNLPKDLMRDIKQHL 454

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP-----------------------ESWLPLLPG 120
           CLAHLKKV LFSSMDKQLLDSM EYL+P                       +  L  L  
Sbjct: 455 CLAHLKKVPLFSSMDKQLLDSMCEYLKPVLFTKKSFILQEGDTIDMMLFIMKGELATLTN 514

Query: 121 VG-KSDQYVVTLNAGDFCGEELVQWAMNTTSTSLPISNRTINTLIEVEAFALKANELKFV 176
            G K + Y+ TL AGDFCGEELVQWAM+ +ST LPISNRTI TL EVEAFALK+NEL+ V
Sbjct: 515 CGWKDNLYLGTLKAGDFCGEELVQWAMDPSSTCLPISNRTIKTLTEVEAFALKSNELESV 574

[Close]

BLAST of Cla97C05G081070 vs. TrEMBL
Match: tr|A0A1S3AVQ5|A0A1S3AVQ5_CUCME (cyclic nucleotide-gated ion channel 1-like OS=Cucumis melo OX=3656 GN=LOC103483193 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 137/199 (68.84%), Postives = 149/199 (74.87%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLPEELRQ IRRYDQYKWQLNRGVKEEELI NLPKDLRRDIK HL
Sbjct: 395 MRINRRDAEHWMAHRMLPEELRQRIRRYDQYKWQLNRGVKEEELICNLPKDLRRDIKQHL 454

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----------------ESWLPLLPGV------ 120
           CLAHLKKV LFS MDKQLLDSM EYL+P                +  L ++ G       
Sbjct: 455 CLAHLKKVPLFSGMDKQLLDSMCEYLKPVLFTKKSFILQEGDTIDMMLFIMKGELATITT 514

Query: 121 --GKSDQYVVTLNAGDFCGEELVQWAMNTTSTSLPISNRTINTLIEVEAFALKANELKFV 176
              K+D Y+ TL AGDFCGEELVQWAM+ +ST LPISNRTI TL EVEAFAL  NEL+ V
Sbjct: 515 CGWKNDPYLGTLKAGDFCGEELVQWAMDPSSTCLPISNRTIKTLTEVEAFALNGNELESV 574

[Close]

BLAST of Cla97C05G081070 vs. TrEMBL
Match: tr|A0A1S3AUR7|A0A1S3AUR7_CUCME (cyclic nucleotide-gated ion channel 1 OS=Cucumis melo OX=3656 GN=LOC103483195 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 9.4e-63
Identity = 136/201 (67.66%), Postives = 151/201 (75.12%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLP+ELR  IRRYDQYKWQLNRGVKEEELISNLPKDLRRDIK HL
Sbjct: 405 MRINRRDAEHWMAHRMLPDELRYRIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKRHL 464

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----------------ESWLPLLPG-----VG 120
           CLA LKKV LFSSMDKQLLD+M EYL+P                +  L ++ G     +G
Sbjct: 465 CLAQLKKVPLFSSMDKQLLDAMCEYLRPVLFTEKSFIMQEGDPIDMMLFIMKGKLATIIG 524

Query: 121 ---KSDQYVVTLNAGDFCGEELVQWAMN--TTSTSLPISNRTINTLIEVEAFALKANELK 176
              K+D Y  TLNAGDFCGEELV WAM+  T ++SLPIS RT+ TL EVEAFALKANELK
Sbjct: 525 CDWKNDLYSATLNAGDFCGEELVHWAMDPTTNTSSLPISKRTVETLTEVEAFALKANELK 584

[Close]

BLAST of Cla97C05G081070 vs. TrEMBL
Match: tr|A0A0A0L356|A0A0A0L356_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119630 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62
Identity = 136/201 (67.66%), Postives = 151/201 (75.12%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+IN RDAEHWMAHRMLP+ELR  IRRYDQYKWQLNRGVKEEELISN PKDLRRDIK HL
Sbjct: 405 MRINRRDAEHWMAHRMLPDELRYRIRRYDQYKWQLNRGVKEEELISNFPKDLRRDIKRHL 464

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----------------ESWLPLLPG-----VG 120
           CLAHLKKV LFSSMDKQLLD+M EYL+P                +  L ++ G     +G
Sbjct: 465 CLAHLKKVPLFSSMDKQLLDAMCEYLRPVLFTEKSFIMQEGDPIDMMLFIMKGKMATIIG 524

Query: 121 ---KSDQYVVTLNAGDFCGEELVQWAMNTTS--TSLPISNRTINTLIEVEAFALKANELK 176
              K+D Y  TLNAGDFCGEELV WAM+ T+  +SLPIS RT+ TL EVEAFALKANELK
Sbjct: 525 CDWKNDLYSDTLNAGDFCGEELVHWAMDPTTNPSSLPISKRTVETLTEVEAFALKANELK 584

[Close]

BLAST of Cla97C05G081070 vs. TrEMBL
Match: tr|A0A1J7GVS9|A0A1J7GVS9_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_18059 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 102/204 (50.00%), Postives = 133/204 (65.20%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+I  RDAEHWM+HRMLP+ L++ +RRYDQYKWQ NRGV+EE LI NLPKDLRRDIK HL
Sbjct: 396 MRIKRRDAEHWMSHRMLPDYLKERVRRYDQYKWQKNRGVEEETLIRNLPKDLRRDIKRHL 455

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----------------ESWLPLLPGV------ 120
           CL  LKKV +F +M+KQLLD+M + L+P                +  L ++ G+      
Sbjct: 456 CLDLLKKVPMFENMNKQLLDAMCDRLRPVLYTEKSDIIREGDPVDEMLFIMRGILATATT 515

Query: 121 --GKSDQY-VVTLNAGDFCGEELVQWAMN-TTSTSLPISNRTINTLIEVEAFALKANELK 179
             G++  +    L AGDFCGEEL+ WA++  TS +LPIS RT+ T+ EVEAFAL A +L 
Sbjct: 516 NGGRTGFFNSFVLKAGDFCGEELLTWALDPNTSPNLPISTRTVQTISEVEAFALTAEDLN 575

[Close]

BLAST of Cla97C05G081070 vs. Swiss-Prot
Match: sp|O82226|CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana OX=3702 GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 4.0e-40
Identity = 98/201 (48.76%), Postives = 129/201 (64.18%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M++  RD+E WM HRMLP ELR+ +RRYDQYKW   RGV EE L+ NLPKDLRRDIK HL
Sbjct: 445 MRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHL 504

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP-----ESWL-------------------PLLP 120
           CLA +++V LF +MD++LLD++ E L+P     +S+L                    +  
Sbjct: 505 CLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTT 564

Query: 121 GVGKSDQYVVT-LNAGDFCGEELVQWAMNTTS-TSLPISNRTINTLIEVEAFALKANELK 176
             G+S  Y  + L  GDFCG+EL+ WA++  S ++LP S RT+  L EVEAFAL A+ELK
Sbjct: 565 DGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELK 624

[Close]

BLAST of Cla97C05G081070 vs. Swiss-Prot
Match: sp|Q9M0A4|CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 GN=CNGC9 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.8e-40
Identity = 97/201 (48.26%), Postives = 125/201 (62.19%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M++  RD+E WM HRMLP ELR+ +RRYDQYKW   RGV EE L+ NLPKDLRRDIK HL
Sbjct: 444 MRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHL 503

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----ESWLPLLPGVGKSDQYVV---------- 120
           CLA +++V LF +MD++LLD++ E L+P    ES   +  G   ++   +          
Sbjct: 504 CLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTT 563

Query: 121 -----------TLNAGDFCGEELVQWAMNTTS-TSLPISNRTINTLIEVEAFALKANELK 176
                       L  GDFCGEEL+ WA++  S ++LP S RT   L EVEAFAL A+ELK
Sbjct: 564 DGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELK 623

[Close]

BLAST of Cla97C05G081070 vs. Swiss-Prot
Match: sp|Q8RWS9|CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-38
Identity = 96/210 (45.71%), Postives = 125/210 (59.52%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M++  RD+E WM HRMLP++LR+ +RRYDQYKW   RGV EE L+ NLPKDLRRDIK HL
Sbjct: 429 MRVKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHL 488

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----ESWLPLLPGVGKSDQYVV---------- 120
           CLA +++V LF SMD +LLD++   L+P    ES   +  G    +   +          
Sbjct: 489 CLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTT 548

Query: 121 -----------TLNAGDFCGEELVQWAMNTTS-TSLPISNRTINTLIEVEAFALKANELK 180
                       L  G+FCGEEL+ WA++  S  +LP S RT+  L EVEAFAL + ELK
Sbjct: 549 DGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELK 608

Query: 181 FVTRQYHFQRLNSTQFQLSVRHVLTELTHQ 185
           FV  Q  F+RL+S Q    V+H     +HQ
Sbjct: 609 FVASQ--FRRLHSRQ----VQHTFRFYSHQ 632

[Close]

BLAST of Cla97C05G081070 vs. Swiss-Prot
Match: sp|Q9FXH6|CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 GN=CNGC8 PE=3 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-38
Identity = 93/201 (46.27%), Postives = 124/201 (61.69%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+I  RD+E WM HR LP+ LR+ +RRYDQYKW   RGV EE ++ +LPKDLRRDIK HL
Sbjct: 439 MRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHL 498

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQPESWLPLLPGVGKSD-------------QYVVT 120
           CL  +++V LF++MD++LLD++ E L+P  +      V + D             + V T
Sbjct: 499 CLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTT 558

Query: 121 ------------LNAGDFCGEELVQWAMN-TTSTSLPISNRTINTLIEVEAFALKANELK 176
                       L  GDFCGEEL+ WA++    ++LP S RT+  L EVEAFAL+A ELK
Sbjct: 559 DGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELK 618

[Close]

BLAST of Cla97C05G081070 vs. Swiss-Prot
Match: sp|Q9S9N5|CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 GN=CNGC7 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-38
Identity = 93/201 (46.27%), Postives = 124/201 (61.69%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+I  RD+E WM HR LP+ LR+ +RRYDQYKW   RGV EE ++ +LPKDLRRDIK HL
Sbjct: 433 MRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHL 492

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQPESWLPLLPGVGKSD-------------QYVVT 120
           CL  +++V LF++MD++LLD++ E L+P  +      V + D             + V T
Sbjct: 493 CLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTT 552

Query: 121 ------------LNAGDFCGEELVQWAMN-TTSTSLPISNRTINTLIEVEAFALKANELK 176
                       L  GDFCGEEL+ WA++    ++LP S RT+  L EVEAFAL+A ELK
Sbjct: 553 DGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELK 612

[Close]

BLAST of Cla97C05G081070 vs. TAIR10
Match: AT2G23980.1 (cyclic nucleotide-gated channel 6)

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-41
Identity = 98/201 (48.76%), Postives = 129/201 (64.18%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M++  RD+E WM HRMLP ELR+ +RRYDQYKW   RGV EE L+ NLPKDLRRDIK HL
Sbjct: 445 MRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHL 504

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP-----ESWL-------------------PLLP 120
           CLA +++V LF +MD++LLD++ E L+P     +S+L                    +  
Sbjct: 505 CLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTT 564

Query: 121 GVGKSDQYVVT-LNAGDFCGEELVQWAMNTTS-TSLPISNRTINTLIEVEAFALKANELK 176
             G+S  Y  + L  GDFCG+EL+ WA++  S ++LP S RT+  L EVEAFAL A+ELK
Sbjct: 565 DGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELK 624

[Close]

BLAST of Cla97C05G081070 vs. TAIR10
Match: AT4G30560.1 (cyclic nucleotide gated channel 9)

HSP 1 Score: 164.9 bits (416), Expect = 4.9e-41
Identity = 97/201 (48.26%), Postives = 125/201 (62.19%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M++  RD+E WM HRMLP ELR+ +RRYDQYKW   RGV EE L+ NLPKDLRRDIK HL
Sbjct: 444 MRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHL 503

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----ESWLPLLPGVGKSDQYVV---------- 120
           CLA +++V LF +MD++LLD++ E L+P    ES   +  G   ++   +          
Sbjct: 504 CLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTT 563

Query: 121 -----------TLNAGDFCGEELVQWAMNTTS-TSLPISNRTINTLIEVEAFALKANELK 176
                       L  GDFCGEEL+ WA++  S ++LP S RT   L EVEAFAL A+ELK
Sbjct: 564 DGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELK 623

[Close]

BLAST of Cla97C05G081070 vs. TAIR10
Match: AT1G19780.1 (cyclic nucleotide gated channel 8)

HSP 1 Score: 161.0 bits (406), Expect = 7.1e-40
Identity = 93/201 (46.27%), Postives = 124/201 (61.69%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+I  RD+E WM HR LP+ LR+ +RRYDQYKW   RGV EE ++ +LPKDLRRDIK HL
Sbjct: 439 MRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHL 498

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQPESWLPLLPGVGKSD-------------QYVVT 120
           CL  +++V LF++MD++LLD++ E L+P  +      V + D             + V T
Sbjct: 499 CLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTT 558

Query: 121 ------------LNAGDFCGEELVQWAMN-TTSTSLPISNRTINTLIEVEAFALKANELK 176
                       L  GDFCGEEL+ WA++    ++LP S RT+  L EVEAFAL+A ELK
Sbjct: 559 DGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELK 618

[Close]

BLAST of Cla97C05G081070 vs. TAIR10
Match: AT5G57940.1 (cyclic nucleotide gated channel 5)

HSP 1 Score: 161.0 bits (406), Expect = 7.1e-40
Identity = 96/210 (45.71%), Postives = 125/210 (59.52%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M++  RD+E WM HRMLP++LR+ +RRYDQYKW   RGV EE L+ NLPKDLRRDIK HL
Sbjct: 429 MRVKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHL 488

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQP----ESWLPLLPGVGKSDQYVV---------- 120
           CLA +++V LF SMD +LLD++   L+P    ES   +  G    +   +          
Sbjct: 489 CLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTT 548

Query: 121 -----------TLNAGDFCGEELVQWAMNTTS-TSLPISNRTINTLIEVEAFALKANELK 180
                       L  G+FCGEEL+ WA++  S  +LP S RT+  L EVEAFAL + ELK
Sbjct: 549 DGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELK 608

Query: 181 FVTRQYHFQRLNSTQFQLSVRHVLTELTHQ 185
           FV  Q  F+RL+S Q    V+H     +HQ
Sbjct: 609 FVASQ--FRRLHSRQ----VQHTFRFYSHQ 632

[Close]

BLAST of Cla97C05G081070 vs. TAIR10
Match: AT1G15990.1 (cyclic nucleotide gated channel 7)

HSP 1 Score: 160.6 bits (405), Expect = 9.2e-40
Identity = 93/201 (46.27%), Postives = 124/201 (61.69%), Query Frame = 0


Query: 1   MKINPRDAEHWMAHRMLPEELRQHIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHL 60
           M+I  RD+E WM HR LP+ LR+ +RRYDQYKW   RGV EE ++ +LPKDLRRDIK HL
Sbjct: 404 MRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHL 463

Query: 61  CLAHLKKVLLFSSMDKQLLDSMREYLQPESWLPLLPGVGKSD-------------QYVVT 120
           CL  +++V LF++MD++LLD++ E L+P  +      V + D             + V T
Sbjct: 464 CLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTT 523

Query: 121 ------------LNAGDFCGEELVQWAMN-TTSTSLPISNRTINTLIEVEAFALKANELK 176
                       L  GDFCGEEL+ WA++    ++LP S RT+  L EVEAFAL+A ELK
Sbjct: 524 DGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELK 583

The following BLAST results are available for this feature:

BLAST of Cla97C05G081070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134306.2	2.0e-64	69.35	PREDICTED: cyclic nucleotide-gated ion channel 1 [Cucumis sativus] >KGN56431.1 h...	[more]
XP_008437903.1	2.6e-64	68.84	PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis melo]	[more]
XP_022980030.1	1.7e-63	67.84	cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucurbita maxima] >XP_022...	[more]
XP_022980035.1	1.7e-63	67.84	cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucurbita maxima]	[more]
XP_008437907.1	1.4e-62	67.66	PREDICTED: cyclic nucleotide-gated ion channel 1 [Cucumis melo]	[more]

BLAST of Cla97C05G081070 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8L1\|A0A0A0L8L1_CUCSA	1.3e-64	69.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119640 PE=4 SV=1	[more]
tr\|A0A1S3AVQ5\|A0A1S3AVQ5_CUCME	1.7e-64	68.84	cyclic nucleotide-gated ion channel 1-like OS=Cucumis melo OX=3656 GN=LOC1034831...	[more]
tr\|A0A1S3AUR7\|A0A1S3AUR7_CUCME	9.4e-63	67.66	cyclic nucleotide-gated ion channel 1 OS=Cucumis melo OX=3656 GN=LOC103483195 PE...	[more]
tr\|A0A0A0L356\|A0A0A0L356_CUCSA	1.2e-62	67.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119630 PE=4 SV=1	[more]
tr\|A0A1J7GVS9\|A0A1J7GVS9_LUPAN	1.2e-41	50.00	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_18059 PE=4 S...	[more]

BLAST of Cla97C05G081070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82226\|CNGC6_ARATH	4.0e-40	48.76	Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q9M0A4\|CNGC9_ARATH	8.8e-40	48.26	Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q8RWS9\|CNGC5_ARATH	1.3e-38	45.71	Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q9FXH6\|CNGC8_ARATH	1.3e-38	46.27	Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q9S9N5\|CNGC7_ARATH	1.7e-38	46.27	Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Cla97C05G081070 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23980.1	2.2e-41	48.76	cyclic nucleotide-gated channel 6	[more]
AT4G30560.1	4.9e-41	48.26	cyclic nucleotide gated channel 9	[more]
AT1G19780.1	7.1e-40	46.27	cyclic nucleotide gated channel 8	[more]
AT5G57940.1	7.1e-40	45.71	cyclic nucleotide gated channel 5	[more]
AT1G15990.1	9.2e-40	46.27	cyclic nucleotide gated channel 7	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018490	cNMP-bd-like
IPR014710	RmlC-like_jellyroll

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005216	ion channel activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G081070.1	Cla97C05G081070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.287.630		coord: 2..61 e-value: 1.5E-14 score: 56.1
None	No IPR available	PANTHER	PTHR10217:SF465	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1	coord: 1..88
None	No IPR available	PANTHER	PTHR10217	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	coord: 1..88
None	No IPR available	PANTHER	PTHR10217	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	coord: 107..176
None	No IPR available	PANTHER	PTHR10217:SF465	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1	coord: 107..176
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 97..161 e-value: 2.4E-12 score: 48.7
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	SSF51206	cAMP-binding domain-like	coord: 6..156

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G081070	Watermelon (97103) v2	wmbwmbB016
Cla97C05G081070	Watermelon (97103) v2	wmbwmbB130
Cla97C05G081070	Silver-seed gourd	carwmbB0130
Cla97C05G081070	Silver-seed gourd	carwmbB1041
Cla97C05G081070	Silver-seed gourd	carwmbB1047
Cla97C05G081070	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G081070	Cucumber (Gy14) v2	cgybwmbB294
Cla97C05G081070	Cucumber (Gy14) v2	cgybwmbB364
Cla97C05G081070	Cucumber (Gy14) v1	cgywmbB144
Cla97C05G081070	Cucumber (Gy14) v1	cgywmbB381
Cla97C05G081070	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB008
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB344
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB345
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB429
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB652
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB761
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB859
Cla97C05G081070	Cucurbita maxima (Rimu)	cmawmbB860
Cla97C05G081070	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G081070	Cucurbita moschata (Rifu)	cmowmbB328
Cla97C05G081070	Cucurbita moschata (Rifu)	cmowmbB330
Cla97C05G081070	Cucurbita moschata (Rifu)	cmowmbB410
Cla97C05G081070	Cucurbita moschata (Rifu)	cmowmbB625
Cla97C05G081070	Cucurbita moschata (Rifu)	cmowmbB733
Cla97C05G081070	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G081070	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G081070	Wild cucumber (PI 183967)	cpiwmbB321
Cla97C05G081070	Wild cucumber (PI 183967)	cpiwmbB399
Cla97C05G081070	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G081070	Cucumber (Chinese Long) v3	cucwmbB319
Cla97C05G081070	Cucumber (Chinese Long) v3	cucwmbB395
Cla97C05G081070	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G081070	Cucumber (Chinese Long) v2	cuwmbB311
Cla97C05G081070	Cucumber (Chinese Long) v2	cuwmbB381
Cla97C05G081070	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G081070	Bottle gourd (USVL1VR-Ls)	lsiwmbB339
Cla97C05G081070	Melon (DHL92) v3.6.1	medwmbB024
Cla97C05G081070	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G081070	Melon (DHL92) v3.6.1	medwmbB476
Cla97C05G081070	Melon (DHL92) v3.5.1	mewmbB027
Cla97C05G081070	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G081070	Melon (DHL92) v3.5.1	mewmbB437
Cla97C05G081070	Melon (DHL92) v3.5.1	mewmbB483
Cla97C05G081070	Watermelon (Charleston Gray)	wcgwmbB105
Cla97C05G081070	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G081070	Watermelon (Charleston Gray)	wcgwmbB231
Cla97C05G081070	Watermelon (97103) v1	wmwmbB206
Cla97C05G081070	Watermelon (97103) v1	wmwmbB210
Cla97C05G081070	Watermelon (97103) v1	wmwmbB262
Cla97C05G081070	Wax gourd	wgowmbB082
Cla97C05G081070	Wax gourd	wgowmbB191
Cla97C05G081070	Wax gourd	wgowmbB196