Cla97C05G080650 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAACAACCCCACCTCAGTCGCCGGCCAAGTCCCGGCGCATACAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTTCCCAAGTCTCCTCCGGGAATGGGACTACGACTCAGCCCAGGTATTATATTAATCACCATTGAACACAACTTTGTTAAAATCTTATTTATCTTAAATCATGACTTGAAACGAATGTGACGATGATCTATATAATAAAGATTAGAATATGACAGTGTCAAAAATTAATGAATTAAAATTGATATGGATATAGACCAAAATACTACCAAAACTCAAATCTAAGGTAAAAGGCGAGGTTTGAAAATTTCAGCACCAAATTACTTCTTTAAGCTCCCCTAATTTTAAAGAGGAAAATGATATTACCAAAATTCTAGAACAAGAAATCTTTTGCTTTGGTACTATATATTAATCACTATTGAATCCAAAAATTTAAGTTGGTGGGATAGAGTAAATTTAATCATACCAATACTTCAACAAAATGATAATATATTTTAAAAAGTGGTTTTTTTTTTTTTTTTTTTTTACTTGCAAAGTAAAAAGATGACTATTTGAATTTTTCTTGTAATCATTTTTTAACTCTCCCGAAATCGTTTTCAAATGAAGACAAACTCATAATTTAGTTGAGATGTTGAAATCTTTACCCACTTATTATTGTTTTCTTTTATATCAATAATATAAACTTTATGTCATTGGATTATTTTGACATGTTGTTCTACGGATTGATGGTTGCAACGAAAAACAATTAAAAAAAGAAATACTTATTTCATCCTAAGCTATACCAATGACATTCCACTCCATTGTCTAGTTACACGGCAAACACTTCTTACTTATTTTTTAAAAATGCCTTTTCTTTATAGTAGTAGTCGATGTAGCCGAGCTGCATCCATGTTCCTAAGCTCTATCCAATTACATAGAAAACAAAAAAGATATATTAAAAAGAAGTTTTGTTGTAGAGCAAATTATTATTAGACTATTGAATGAGTTACATACATAAGTTTCAGGCTCTTTTCAAATATAGCAAAAAAATCAAAATATTTAAAAATATAGCAAAATTTTATTGTCTATCGAATCTAGATAGTAGTCTATCGTAAAATTTCACTGTCTATTAGACAATGATAATAGTCTATCATAATCTACTGAAGATAGACGGTGTATTTTGCTATTTGTTGTAAATATTTTTGGTAATTTTGTTATTTAAGATAATTTCATGTATAAATTATTTTATTTTTTTTTAATTAGGGTGATGCACTCAATTATTGCTTTTCTGACCATAATTAACAAATTTATTATTTTTATTATTATTATAAAAAAGACCGAAATTTTGATTTATATCGTCAATACAGGATTCAACCGCAGGTAGAGACGAAAGGCATTGTGTACAACAAGGCCGTTGAGAAGCCGGGGAAGTCTGATCGGCCATATGAGTACGGCTCGGGCAAGCCACACCAAAAGCAGCAGCAGGCGGCGGAGGTTATAAATCTCAACGGACATAACGTTGGCGCCGTCATGGAAATAAATAAGTCATCCGACGGCTACCGTTTGGGCAGAGAAACCGTAAAAAAGAACGAAACAGAAGGCGGCGGCGGCCGCCATGGACATGAAGAGAAGAAAATGGGGGCAAAGAAGGGACTGCCGATGACCGCATTTATGAACAGTAACTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGCAACCACCGTGATCCCGGCCTGCATCTCGCGTTTTCCGATGCGGCGGACGGCGACGGAGCCACTGTTGACGGCCACAAAACTTACAAGCCCAAACCCCAGTGA ATGGGGAAACAACCCCACCTCAGTCGCCGGCCAAGTCCCGGCGCATACAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTTCCCAAGTCTCCTCCGGGAATGGGACTACGACTCAGCCCAGAGACGAAAGGCATTGTGTACAACAAGGCCGTTGAGAAGCCGGGGAAGTCTGATCGGCCATATGAGTACGGCTCGGGCAAGCCACACCAAAAGCAGCAGCAGGCGGCGGAGGTTATAAATCTCAACGGACATAACGTTGGCGCCGTCATGGAAATAAATAAGTCATCCGACGGCTACCGTTTGGGCAGAGAAACCGTAAAAAAGAACGAAACAGAAGGCGGCGGCGGCCGCCATGGACATGAAGAGAAGAAAATGGGGGCAAAGAAGGGACTGCCGATGACCGCATTTATGAACAGTAACTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGCAACCACCGTGATCCCGGCCTGCATCTCGCGTTTTCCGATGCGGCGGACGGCGACGGAGCCACTGTTGACGGCCACAAAACTTACAAGCCCAAACCCCAGTGA ATGGGGAAACAACCCCACCTCAGTCGCCGGCCAAGTCCCGGCGCATACAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTTCCCAAGTCTCCTCCGGGAATGGGACTACGACTCAGCCCAGAGACGAAAGGCATTGTGTACAACAAGGCCGTTGAGAAGCCGGGGAAGTCTGATCGGCCATATGAGTACGGCTCGGGCAAGCCACACCAAAAGCAGCAGCAGGCGGCGGAGGTTATAAATCTCAACGGACATAACGTTGGCGCCGTCATGGAAATAAATAAGTCATCCGACGGCTACCGTTTGGGCAGAGAAACCGTAAAAAAGAACGAAACAGAAGGCGGCGGCGGCCGCCATGGACATGAAGAGAAGAAAATGGGGGCAAAGAAGGGACTGCCGATGACCGCATTTATGAACAGTAACTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGCAACCACCGTGATCCCGGCCTGCATCTCGCGTTTTCCGATGCGGCGGACGGCGACGGAGCCACTGTTGACGGCCACAAAACTTACAAGCCCAAACCCCAGTGA MGKQPHLSRRPSPGAYRRRRFLLLLCHVPKSPPGMGLRLSPETKGIVYNKAVEKPGKSDRPYEYGSGKPHQKQQQAAEVINLNGHNVGAVMEINKSSDGYRLGRETVKKNETEGGGGRHGHEEKKMGAKKGLPMTAFMNSNFQSVNNSVLYDSSCNHRDPGLHLAFSDAADGDGATVDGHKTYKPKPQ
BLAST of Cla97C05G080650 vs. NCBI nr
Match: XP_008437851.1 (PREDICTED: zyxin-like [Cucumis melo]) HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48 Identity = 112/151 (74.17%), Postives = 121/151 (80.13%), Query Frame = 0
BLAST of Cla97C05G080650 vs. NCBI nr
Match: XP_004133797.1 (PREDICTED: atherin-like [Cucumis sativus] >KGN56395.1 hypothetical protein Csa_3G119300 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 3.6e-45 Identity = 101/148 (68.24%), Postives = 117/148 (79.05%), Query Frame = 0
BLAST of Cla97C05G080650 vs. NCBI nr
Match: XP_022950117.1 (wiskott-Aldrich syndrome protein family member 2-like [Cucurbita moschata]) HSP 1 Score: 188.7 bits (478), Expect = 1.8e-44 Identity = 102/143 (71.33%), Postives = 109/143 (76.22%), Query Frame = 0
BLAST of Cla97C05G080650 vs. NCBI nr
Match: XP_023538978.1 (leucine-rich repeat extensin-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.9 bits (468), Expect = 2.5e-43 Identity = 106/160 (66.25%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Cla97C05G080650 vs. NCBI nr
Match: XP_023538977.1 (leucine-rich repeat extensin-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.9 bits (468), Expect = 2.5e-43 Identity = 106/160 (66.25%), Postives = 116/160 (72.50%), Query Frame = 0
BLAST of Cla97C05G080650 vs. TrEMBL
Match: tr|A0A1S3AV38|A0A1S3AV38_CUCME (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48 Identity = 112/151 (74.17%), Postives = 121/151 (80.13%), Query Frame = 0
BLAST of Cla97C05G080650 vs. TrEMBL
Match: tr|A0A0A0L320|A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.4e-45 Identity = 101/148 (68.24%), Postives = 117/148 (79.05%), Query Frame = 0
BLAST of Cla97C05G080650 vs. TrEMBL
Match: tr|A0A0A0L3R5|A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.7e-17 Identity = 69/163 (42.33%), Postives = 84/163 (51.53%), Query Frame = 0
BLAST of Cla97C05G080650 vs. TrEMBL
Match: tr|A0A1S3AVL7|A0A1S3AVL7_CUCME (WW domain-binding protein 11-like OS=Cucumis melo OX=3656 GN=LOC103483160 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16 Identity = 64/122 (52.46%), Postives = 75/122 (61.48%), Query Frame = 0
BLAST of Cla97C05G080650 vs. TrEMBL
Match: tr|A0A0A0L8G8|A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.8e-16 Identity = 64/128 (50.00%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of Cla97C05G080650 vs. TAIR10
Match: AT2G46630.1 (unknown protein) HSP 1 Score: 62.0 bits (149), Expect = 4.5e-10 Identity = 42/118 (35.59%), Postives = 54/118 (45.76%), Query Frame = 0
BLAST of Cla97C05G080650 vs. TAIR10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH) HSP 1 Score: 44.7 bits (104), Expect = 7.5e-05 Identity = 30/102 (29.41%), Postives = 46/102 (45.10%), Query Frame = 0
The following BLAST results are available for this feature:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |