Cla97C05G080410 (gene) Watermelon (97103) v2

Overview
NameCla97C05G080410
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 533116 .. 534354 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGGGTCCATTTTATGCATCATAAAACTATATAATGAAACCAAAATTGGCGGTGTTTCTGTTTTGTTCTGGCGTAAAACGTTCCCACGTTCTGACTCTACAGTTTTCTCTCAATTCCGTTCACTTTTCTCCTCTTTAGCTTCCTGTTCCGTTCACTTTACCGGATCTGACTTCCCTCAGTCATCGCCCCACTATCCCGACTCTGCCTTGCCCTTGCCCTTCGATTTGCTCGCTGATCGACGACAAGAATCCTGCGTAATCAATCGACCCCCAAACCCAGGTTTGGTTCTTTTCAATTCTGATGAAAACCCAGACGGGGGTTTCTCTTCACTCGTCCAAAATTATGAACTGGGAAGAAGAGGAGTTTCTATTTGGCTGTTGAAAGTATTCGATTGTCATAACAAGTTAAGTCTGTATAGGACTGTACCGCTTTCCCGGAATTTTGGTAATTTGGATGCTCTGGAAATTCGTATTAGTTTTTTTTTTCTTTTTTTTTTTTTTTGAAATTTTCTAATCGGAAACGGAATATTCTATTTGTTGAAGACTCTCTGTGGCGAAAAATCCTTTTTGGAGCGTTCCGTTTGACATTAAATTGACTGTTTTTGTGATCGGAGTGTAATGGAAGTTGTCCTTTTTCACTTCCCACTTTCTTGTTGGTGAAATCGTTTTTTTATTATTTTCTTCCCGGAGGTTTTTTGTGTTTTGTGCTACCGTTCACTAATTGGGCCCCTTTATTTTTGTCGATATAATCTGTGTTTTTCCCTTTGCTTTCCGAGAAGAACGATTGATAGTGAGGTCAAGACTACTTTCTTCATCTTCTTCTTTTTGAATGAAAGTGGGCAGGTAATCTTTTCTTAATTTCGGGCGCTCATGGATTTCAAATAAGCAATAACGAATTCTTACTATTTTTGGCTCTTATTACAAAAGAAAAGAAGGAATTCTTACTGTTCTGGTCAGCAAGTGAATTCTTAAGTGAATTGCTTCTTTCTCTATTTTCAACCTATAGATAACATCTTCTTTGTGGAACTGAACACAGATGTAGGCTATTAAGAATAAATTATTGGACCTCCAATCTAGGTTTTCCTTTATGCTATTCTCATTTGGAAAGCTTGAAATATTATTGTGTACTTATGTTACTTGTGTTAAGCTCTGAATAAGTATTGGGTATGTGTATTGTATTCTGATGCTGTTCATGTGTTTAGATGTTATCGCCCGATTGCACTCAAGAGTGCCTAA

mRNA sequence

ATGATGGGGTCCATTTTATGCATCATAAAACTATATAATGAAACCAAAATTGGCGGTGTTTCTGTTTTGTTCTGGCGTAAAACGTTCCCACGTTCTGACTCTACAGTTTTCTCTCAATTCCGTTCACTTTTCTCCTCTTTAGCTTCCTGTTCCGTTCACTTTACCGGATCTGACTTCCCTCAGTCATCGCCCCACTATCCCGACTCTGCCTTGCCCTTGCCCTTCGATTTGCTCGCTGATCGACGACAAGAATCCTGCGTAATCAATCGACCCCCAAACCCAGGTTTGGTTCTTTTCAATTCTGATGAAAACCCAGACGGGGGTTTCTCTTCACTCGTCCAAAATTATGAACTGGGAAGAAGAGGAGTTTCTATTTGGCTGTTGAAAGTATTCGATTGTCATAACAAGTTAAGTCTGTATAGGACTGTACCGCTTTCCCGGAATTTTGCTCTGAATAAGTATTGGGTATGTGTATTGTATTCTGATGCTGTTCATGTGTTTAGATGTTATCGCCCGATTGCACTCAAGAGTGCCTAA

Coding sequence (CDS)

ATGATGGGGTCCATTTTATGCATCATAAAACTATATAATGAAACCAAAATTGGCGGTGTTTCTGTTTTGTTCTGGCGTAAAACGTTCCCACGTTCTGACTCTACAGTTTTCTCTCAATTCCGTTCACTTTTCTCCTCTTTAGCTTCCTGTTCCGTTCACTTTACCGGATCTGACTTCCCTCAGTCATCGCCCCACTATCCCGACTCTGCCTTGCCCTTGCCCTTCGATTTGCTCGCTGATCGACGACAAGAATCCTGCGTAATCAATCGACCCCCAAACCCAGGTTTGGTTCTTTTCAATTCTGATGAAAACCCAGACGGGGGTTTCTCTTCACTCGTCCAAAATTATGAACTGGGAAGAAGAGGAGTTTCTATTTGGCTGTTGAAAGTATTCGATTGTCATAACAAGTTAAGTCTGTATAGGACTGTACCGCTTTCCCGGAATTTTGCTCTGAATAAGTATTGGGTATGTGTATTGTATTCTGATGCTGTTCATGTGTTTAGATGTTATCGCCCGATTGCACTCAAGAGTGCCTAA

Protein sequence

MMGSILCIIKLYNETKIGGVSVLFWRKTFPRSDSTVFSQFRSLFSSLASCSVHFTGSDFPQSSPHYPDSALPLPFDLLADRRQESCVINRPPNPGLVLFNSDENPDGGFSSLVQNYELGRRGVSIWLLKVFDCHNKLSLYRTVPLSRNFALNKYWVCVLYSDAVHVFRCYRPIALKSA
Homology
[Close]
BLAST of Cla97C05G080410 vs. NCBI nr
Match: XP_022946534.1 (uncharacterized protein LOC111450568 isoform X1 [Cucurbita moschata])

HSP 1 Score: 82.0 bits (201), Expect = 2.2e-12
Identity = 46/70 (65.71%), Postives = 48/70 (68.57%), Query Frame = 0 

Query: 1  MMGSILCIIKLYNETKIGGVSVLFWRKTFPRSDSTVFSQFRSLFSSLASCSVHFTGSDFP 60
          MMGSI CIIKLYNETKIGGVSVLFWRK  PRSD TVF+QFRSL SS          S FP
Sbjct: 1  MMGSIFCIIKLYNETKIGGVSVLFWRKFIPRSDCTVFAQFRSLSSSF--------DSFFP 60

Query: 61 QSSPHYPDSA 71
            SP    S+
Sbjct: 61 LISPDLTSSS 62

[Close]
BLAST of Cla97C05G080410 vs. NCBI nr
Match: XP_022946542.1 (uncharacterized protein LOC111450568 isoform X2 [Cucurbita moschata])

HSP 1 Score: 82.0 bits (201), Expect = 2.2e-12
Identity = 46/70 (65.71%), Postives = 48/70 (68.57%), Query Frame = 0 

Query: 1  MMGSILCIIKLYNETKIGGVSVLFWRKTFPRSDSTVFSQFRSLFSSLASCSVHFTGSDFP 60
          MMGSI CIIKLYNETKIGGVSVLFWRK  PRSD TVF+QFRSL SS          S FP
Sbjct: 1  MMGSIFCIIKLYNETKIGGVSVLFWRKFIPRSDCTVFAQFRSLSSSF--------DSFFP 60

Query: 61 QSSPHYPDSA 71
            SP    S+
Sbjct: 61 LISPDLTSSS 62

[Close]
BLAST of Cla97C05G080410 vs. NCBI nr
Match: XP_023540267.1 (uncharacterized protein LOC111800693 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 80.9 bits (198), Expect = 4.9e-12
Identity = 46/70 (65.71%), Postives = 47/70 (67.14%), Query Frame = 0 

Query: 1  MMGSILCIIKLYNETKIGGVSVLFWRKTFPRSDSTVFSQFRSLFSSLASCSVHFTGSDFP 60
          MMGSI CIIKLYNETKIGGVSVLFWRK  PRSD TVF QFRSL SS          S FP
Sbjct: 1  MMGSIFCIIKLYNETKIGGVSVLFWRKFIPRSDCTVFVQFRSLSSSF--------DSFFP 60

Query: 61 QSSPHYPDSA 71
            SP    S+
Sbjct: 61 LISPDLTSSS 62

[Close]
BLAST of Cla97C05G080410 vs. NCBI nr
Match: XP_023540266.1 (uncharacterized protein LOC111800693 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 80.9 bits (198), Expect = 4.9e-12
Identity = 46/70 (65.71%), Postives = 47/70 (67.14%), Query Frame = 0 

Query: 1  MMGSILCIIKLYNETKIGGVSVLFWRKTFPRSDSTVFSQFRSLFSSLASCSVHFTGSDFP 60
          MMGSI CIIKLYNETKIGGVSVLFWRK  PRSD TVF QFRSL SS          S FP
Sbjct: 1  MMGSIFCIIKLYNETKIGGVSVLFWRKFIPRSDCTVFVQFRSLSSSF--------DSFFP 60

Query: 61 QSSPHYPDSA 71
            SP    S+
Sbjct: 61 LISPDLTSSS 62

[Close]
BLAST of Cla97C05G080410 vs. NCBI nr
Match: XP_022974818.1 (uncharacterized protein LOC111473601 isoform X2 [Cucurbita maxima])

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-11
Identity = 40/49 (81.63%), Postives = 41/49 (83.67%), Query Frame = 0 

Query: 1  MMGSILCIIKLYNETKIGGVSVLFWRKTFPRSDSTVFSQFRSLFSSLAS 50
          MMGSI CIIKLYNETKIG VSVLFWRK FPRS  TVF+QFRSL SS  S
Sbjct: 1  MMGSIFCIIKLYNETKIGCVSVLFWRKFFPRSHGTVFAQFRSLSSSFHS 49

The following BLAST results are available for this feature:
BLAST of Cla97C05G080410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946534.12.2e-1265.71uncharacterized protein LOC111450568 isoform X1 [Cucurbita moschata][more]
XP_022946542.12.2e-1265.71uncharacterized protein LOC111450568 isoform X2 [Cucurbita moschata][more]
XP_023540267.14.9e-1265.71uncharacterized protein LOC111800693 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023540266.14.9e-1265.71uncharacterized protein LOC111800693 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022974818.12.4e-1181.63uncharacterized protein LOC111473601 isoform X2 [Cucurbita maxima][more]
BLAST of Cla97C05G080410 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Cla97C05G080410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G080410 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G080410.1Cla97C05G080410.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G080410Silver-seed gourdcarwmbB0138
Cla97C05G080410Silver-seed gourdcarwmbB1047
Cla97C05G080410Cucumber (Gy14) v2cgybwmbB196
Cla97C05G080410Cucumber (Gy14) v1cgywmbB452
Cla97C05G080410Cucurbita maxima (Rimu)cmawmbB263
Cla97C05G080410Cucurbita maxima (Rimu)cmawmbB857
Cla97C05G080410Cucurbita maxima (Rimu)cmawmbB862
Cla97C05G080410Cucurbita moschata (Rifu)cmowmbB243
Cla97C05G080410Cucurbita moschata (Rifu)cmowmbB833
Cla97C05G080410Wild cucumber (PI 183967)cpiwmbB209
Cla97C05G080410Cucumber (Chinese Long) v3cucwmbB206
Cla97C05G080410Cucumber (Chinese Long) v2cuwmbB204
Cla97C05G080410Bottle gourd (USVL1VR-Ls)lsiwmbB333
Cla97C05G080410Melon (DHL92) v3.6.1medwmbB423
Cla97C05G080410Melon (DHL92) v3.5.1mewmbB434
Cla97C05G080410Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G080410Watermelon (97103) v1wmwmbB206
Cla97C05G080410Wax gourdwgowmbB191