Cla97C04G070010 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGTAATATTTTTGTACGCTGTTTTACTAGAACTCAAGCCTAGCCAGGATATTTGTGACATTAAAATGGCTGCTTCATCATCCCTTATGGCACACTCTTTGCAAGCACATTCATCCATTGAACTGGCAATAAAATGTTGTAAGGGCTATATGCATTGTAACTTATGTTCATCGTACTCCTGGATTGGATACTCCAAGTCCAAGTTCCTAACAAGTCCTAAGTTTTCACATAACGAGAATTCATCAAAATGGGAACATATTGAGAAATGCCCAATGAGGAATGAAATCTGGTGCCGAGCTATGGAAATTGAGAATTTACTTTCTCCTTTTGTTAGCAAAAAGTTTGAGCTTGATGATGTGATTGAAGCACAACAATTTGATAGAGAGATTCTCGATTTTGTTTTTGAAGTTGCACATGATATGGAAAAGATTGAAAAAAGTTCATCTAAAAGCCAAATGCTCAAGGGATATTTGATGGCTACCCTGTTCTACGAGCCCTCAACTAGAGCTAGGCTTTCATTTGAATCTGCCATGAAAAGTTTGGGTGAGGAGGTATTGGCCACTGAAAATGTGCGGGAGTTTTCTTCAGCAGCCAAAGGAGAAACCTGA ATGACAGTAATATTTTTGTACGCTGTTTTACTAGAACTCAAGCCTAGCCAGGATATTTGTGACATTAAAATGGCTGCTTCATCATCCCTTATGGCACACTCTTTGCAAGCACATTCATCCATTGAACTGGCAATAAAATGTTGTAAGGGCTATATGCATTGTAACTTATGTTCATCGTACTCCTGGATTGGATACTCCAAGTCCAAGTTCCTAACAAGTCCTAAGTTTTCACATAACGAGAATTCATCAAAATGGGAACATATTGAGAAATGCCCAATGAGGAATGAAATCTGGTGCCGAGCTATGGAAATTGAGAATTTACTTTCTCCTTTTGTTAGCAAAAAGTTTGAGCTTGATGATGTGATTGAAGCACAACAATTTGATAGAGAGATTCTCGATTTTGTTTTTGAAGTTGCACATGATATGGAAAAGATTGAAAAAAGTTCATCTAAAAGCCAAATGCTCAAGGGATATTTGATGGCTACCCTGTTCTACGAGCCCTCAACTAGAGCTAGGCTTTCATTTGAATCTGCCATGAAAAGTTTGGGTGAGGAGGTATTGGCCACTGAAAATGTGCGGGAGTTTTCTTCAGCAGCCAAAGGAGAAACCTGA ATGACAGTAATATTTTTGTACGCTGTTTTACTAGAACTCAAGCCTAGCCAGGATATTTGTGACATTAAAATGGCTGCTTCATCATCCCTTATGGCACACTCTTTGCAAGCACATTCATCCATTGAACTGGCAATAAAATGTTGTAAGGGCTATATGCATTGTAACTTATGTTCATCGTACTCCTGGATTGGATACTCCAAGTCCAAGTTCCTAACAAGTCCTAAGTTTTCACATAACGAGAATTCATCAAAATGGGAACATATTGAGAAATGCCCAATGAGGAATGAAATCTGGTGCCGAGCTATGGAAATTGAGAATTTACTTTCTCCTTTTGTTAGCAAAAAGTTTGAGCTTGATGATGTGATTGAAGCACAACAATTTGATAGAGAGATTCTCGATTTTGTTTTTGAAGTTGCACATGATATGGAAAAGATTGAAAAAAGTTCATCTAAAAGCCAAATGCTCAAGGGATATTTGATGGCTACCCTGTTCTACGAGCCCTCAACTAGAGCTAGGCTTTCATTTGAATCTGCCATGAAAAGTTTGGGTGAGGAGGTATTGGCCACTGAAAATGTGCGGGAGTTTTCTTCAGCAGCCAAAGGAGAAACCTGA MTVIFLYAVLLELKPSQDICDIKMAASSSLMAHSLQAHSSIELAIKCCKGYMHCNLCSSYSWIGYSKSKFLTSPKFSHNENSSKWEHIEKCPMRNEIWCRAMEIENLLSPFVSKKFELDDVIEAQQFDREILDFVFEVAHDMEKIEKSSSKSQMLKGYLMATLFYEPSTRARLSFESAMKSLGEEVLATENVREFSSAAKGET
BLAST of Cla97C04G070010 vs. NCBI nr
Match: XP_004149350.1 (PREDICTED: aspartate carbamoyltransferase, chloroplastic [Cucumis sativus] >KGN56108.1 hypothetical protein Csa_3G074470 [Cucumis sativus]) HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77 Identity = 153/180 (85.00%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Cla97C04G070010 vs. NCBI nr
Match: XP_008449144.1 (PREDICTED: aspartate carbamoyltransferase, chloroplastic [Cucumis melo]) HSP 1 Score: 290.0 bits (741), Expect = 6.1e-75 Identity = 152/180 (84.44%), Postives = 163/180 (90.56%), Query Frame = 0
BLAST of Cla97C04G070010 vs. NCBI nr
Match: XP_022932282.1 (aspartate carbamoyltransferase, chloroplastic [Cucurbita moschata] >XP_022965067.1 aspartate carbamoyltransferase, chloroplastic [Cucurbita maxima]) HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74 Identity = 151/180 (83.89%), Postives = 162/180 (90.00%), Query Frame = 0
BLAST of Cla97C04G070010 vs. NCBI nr
Match: XP_023553188.1 (aspartate carbamoyltransferase, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68 Identity = 144/180 (80.00%), Postives = 155/180 (86.11%), Query Frame = 0
BLAST of Cla97C04G070010 vs. NCBI nr
Match: XP_022158871.1 (aspartate carbamoyltransferase, chloroplastic isoform X1 [Momordica charantia]) HSP 1 Score: 227.3 bits (578), Expect = 4.8e-56 Identity = 128/181 (70.72%), Postives = 145/181 (80.11%), Query Frame = 0
BLAST of Cla97C04G070010 vs. TrEMBL
Match: tr|A0A0A0L2Y6|A0A0A0L2Y6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G074470 PE=3 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 8.6e-78 Identity = 153/180 (85.00%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Cla97C04G070010 vs. TrEMBL
Match: tr|A0A1S3BLD7|A0A1S3BLD7_CUCME (aspartate carbamoyltransferase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491094 PE=3 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 4.0e-75 Identity = 152/180 (84.44%), Postives = 163/180 (90.56%), Query Frame = 0
BLAST of Cla97C04G070010 vs. TrEMBL
Match: tr|A0A2P5F299|A0A2P5F299_9ROSA (Aspartate carbamoyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_122360 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 2.5e-40 Identity = 107/181 (59.12%), Postives = 124/181 (68.51%), Query Frame = 0
BLAST of Cla97C04G070010 vs. TrEMBL
Match: tr|A0A251PPE9|A0A251PPE9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G221200 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.6e-39 Identity = 103/183 (56.28%), Postives = 125/183 (68.31%), Query Frame = 0
BLAST of Cla97C04G070010 vs. TrEMBL
Match: tr|M5WI39|M5WI39_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa006647mg PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.1e-39 Identity = 103/182 (56.59%), Postives = 124/182 (68.13%), Query Frame = 0
BLAST of Cla97C04G070010 vs. Swiss-Prot
Match: sp|Q43064|PYRB3_PEA (Aspartate carbamoyltransferase 3, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB3 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 7.1e-35 Identity = 93/180 (51.67%), Postives = 114/180 (63.33%), Query Frame = 0
BLAST of Cla97C04G070010 vs. Swiss-Prot
Match: sp|Q43087|PYRB2_PEA (Aspartate carbamoyltransferase 2, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB2 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33 Identity = 92/180 (51.11%), Postives = 113/180 (62.78%), Query Frame = 0
BLAST of Cla97C04G070010 vs. Swiss-Prot
Match: sp|Q43086|PYRB1_PEA (Aspartate carbamoyltransferase 1, chloroplastic OS=Pisum sativum OX=3888 GN=PYRB1 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.2e-31 Identity = 74/103 (71.84%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of Cla97C04G070010 vs. Swiss-Prot
Match: sp|P49077|PYRB_ARATH (Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYRB PE=2 SV=2) HSP 1 Score: 135.2 bits (339), Expect = 8.2e-31 Identity = 91/180 (50.56%), Postives = 112/180 (62.22%), Query Frame = 0
BLAST of Cla97C04G070010 vs. Swiss-Prot
Match: sp|Q9LD61|PYRB_ORYSJ (Aspartate carbamoyltransferase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PYRB PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.3e-25 Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 0
BLAST of Cla97C04G070010 vs. TAIR10
Match: AT3G20330.1 (PYRIMIDINE B) HSP 1 Score: 135.2 bits (339), Expect = 4.5e-32 Identity = 91/180 (50.56%), Postives = 112/180 (62.22%), Query Frame = 0
BLAST of Cla97C04G070010 vs. TAIR10
Match: AT1G75330.1 (ornithine carbamoyltransferase) HSP 1 Score: 42.4 bits (98), Expect = 4.0e-04 Identity = 28/96 (29.17%), Postives = 49/96 (51.04%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |