Cla97C03G063590 (gene) Watermelon (97103) v2

NameCla97C03G063590
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionExtensin domain
LocationCla97Chr03 : 26321704 .. 26323584 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATATCTAAACCTCCGGGACATTGGCTCCCTATGTTTTGGGTTGTCACATTATGTCTTCTTGCTACTAAAGTAGTGGCTGCTAAAGACCCTTATGTTTATGCCTCACCACCGCCACCTCCGTCATGGAAGTCTCCACCACCTCCATCACTATATTATTACAAATCTCCACCACCTCCACCGTATATCTATAAGTCACCTCCTCCACCTTCTCCACCATTGCCACCTCCATACATTTATAAATCACCACCACCACCATCACCATCTCCGACACCACCATACTATTATAAATCACCACCTCAATCATCACTTTCTCCTTCACCTCCTTATTACTACACGTCTCCACTTCCACCATCTCTATCACCACCTCCTCCATACGTTTATAAGTCACCACCACTGCCTTACATTTATAAGTCTCCACATCCACCGTCCACTTACCCACCACCATCTTATGAACACAAATCACCACATCTTCCACATGAGAGACCACAAGCACCATATCACTATAAATCTCCACCGTCTACATATGTTTACAAATCTCCTCCGCCACCATTACAATCCCTACCACCTCCTTACATATATAAATCCCTACCTCCACCTTCTCTATCGCCACCTCCACCATATGTCTATAAATCTGCCCCGCCTCCAACTCCTTCATCTCCTCCACCATATTACTATAAGTCTCCCCCTCCACCCTCTCCACCTCCTCCACCTCCATATGTTTATAAATCTCCTCCACCACCTTCACTATCCCCACCACCTCCTTACATCTATAAATCTCCTCCTCCGTCATCTCCATCACTGCCTCCTCCATACGTTTACAAATCTCCTCCTCCACCATTTCCATCTCCACCGCCGCCCTATGTTTACAAATCTCCCCCACCACCACCATCATCTCCACCACCTCCCTATATCTATAAGTTTCCCCCTCCTCCATCTCCATCTCCACCTCCTCCATATATTTACAAATCTCCTCCACCACCCTTACCATCCCCACCACCTCCTTACATCTATAAATCTCCCCCTCCACCATCGTCATCACCACCTCCTCCATATGTTTACAAATCTCCCCCACCTCCATCTCCTTCACCTCCTCCACCATACTACTATAAGTCTCCCCCTCCACCGTCTCTCTCTCCACCGCCTCCGTATGTTTACAAATCTCCTCCACCACCATCACCATCCCCACCACCTCCTTACATCTATAAATCCCCCTCTCCACCATCTCCATCACCTCCACCTCCATATGTTTACAAATCTCCCCCGCCTCCATCACCTTCACCTCCCCCATCATACTACTATAAGTCTCCCCCTCTGCCATCTCCATCTCCACCGCCTCCATATGTTTATAAATCTACTCCACCACCCTCACCATCCCCACCACCTCCTTACATCTATAAATCCCCACCTCCACCTTCACCATCACCACCTCCTCCATATATCTACAAATCTTCCCCACCTCCATCTCCTTCGCCACCTCCACCATACTATTATAAGTCTCCCCCTCCACCATTTCTCTCTCCACCACCTCCATATATTTACAAATCTCCTCCACTTCCATCTCCTCCTCCACCATACTACTACAAGTCTCCCCCTCCCCCTCCACCATCTCCATCTCCACCACCGCCTTACATCTATAAATCCCCCCCACCTCCATCTCCATCACCACCTCCTCCATATGTTTACAAATCTCCTCCATCCCCTTCTCCATCACCTCCTCCACCGTACTATTACAAGTCTCCACCTCCACCATCTCCATCACCGCCTCCTCCATATCTTTACAAGTCTCCACCACCACATTCACCAATACTACCATCTCCTTACTTCTATAAGTCTCCACCTCCTCCATCTCCATCATCACCTCTCCCATATTATTAA

mRNA sequence

ATGGAGATATCTAAACCTCCGGGACATTGGCTCCCTATGTTTTGGGTTGTCACATTATGTCTTCTTGCTACTAAAGTAGTGGCTGCTAAAGACCCTTATGTTTATGCCTCACCACCGCCACCTCCGTCATGGAAGTCTCCACCACCTCCATCACTATATTATTACAAATCTCCACCACCTCCACCGTATATCTATAAGTCACCTCCTCCACCTTCTCCACCATTGCCACCTCCATACATTTATAAATCACCACCACCACCATCACCATCTCCGACACCACCATACTATTATAAATCACCACCTCAATCATCACTTTCTCCTTCACCTCCTTATTACTACACGTCTCCACTTCCACCATCTCTATCACCACCTCCTCCATACGTTTATAAGTCACCACCACTGCCTTACATTTATAAGTCTCCACATCCACCGTCCACTTACCCACCACCATCTTATGAACACAAATCACCACATCTTCCACATGAGAGACCACAAGCACCATATCACTATAAATCTCCACCGTCTACATATGTTTACAAATCTCCTCCGCCACCATTACAATCCCTACCACCTCCTTACATATATAAATCCCTACCTCCACCTTCTCTATCGCCACCTCCACCATATGTCTATAAATCTGCCCCGCCTCCAACTCCTTCATCTCCTCCACCATATTACTATAAGTCTCCCCCTCCACCCTCTCCACCTCCTCCACCTCCATATGTTTATAAATCTCCTCCACCACCTTCACTATCCCCACCACCTCCTTACATCTATAAATCTCCTCCTCCGTCATCTCCATCACTGCCTCCTCCATACGTTTACAAATCTCCTCCTCCACCATTTCCATCTCCACCGCCGCCCTATGTTTACAAATCTCCCCCACCACCACCATCATCTCCACCACCTCCCTATATCTATAAGTTTCCCCCTCCTCCATCTCCATCTCCACCTCCTCCATATATTTACAAATCTCCTCCACCACCCTTACCATCCCCACCACCTCCTTACATCTATAAATCTCCCCCTCCACCATCGTCATCACCACCTCCTCCATATGTTTACAAATCTCCCCCACCTCCATCTCCTTCACCTCCTCCACCATACTACTATAAGTCTCCCCCTCCACCGTCTCTCTCTCCACCGCCTCCGTATGTTTACAAATCTCCTCCACCACCATCACCATCCCCACCACCTCCTTACATCTATAAATCCCCCTCTCCACCATCTCCATCACCTCCACCTCCATATGTTTACAAATCTCCCCCGCCTCCATCACCTTCACCTCCCCCATCATACTACTATAAGTCTCCCCCTCTGCCATCTCCATCTCCACCGCCTCCATATGTTTATAAATCTACTCCACCACCCTCACCATCCCCACCACCTCCTTACATCTATAAATCCCCACCTCCACCTTCACCATCACCACCTCCTCCATATATCTACAAATCTTCCCCACCTCCATCTCCTTCGCCACCTCCACCATACTATTATAAGTCTCCCCCTCCACCATTTCTCTCTCCACCACCTCCATATATTTACAAATCTCCTCCACTTCCATCTCCTCCTCCACCATACTACTACAAGTCTCCCCCTCCCCCTCCACCATCTCCATCTCCACCACCGCCTTACATCTATAAATCCCCCCCACCTCCATCTCCATCACCACCTCCTCCATATGTTTACAAATCTCCTCCATCCCCTTCTCCATCACCTCCTCCACCGTACTATTACAAGTCTCCACCTCCACCATCTCCATCACCGCCTCCTCCATATCTTTACAAGTCTCCACCACCACATTCACCAATACTACCATCTCCTTACTTCTATAAGTCTCCACCTCCTCCATCTCCATCATCACCTCTCCCATATTATTAA

Coding sequence (CDS)

ATGGAGATATCTAAACCTCCGGGACATTGGCTCCCTATGTTTTGGGTTGTCACATTATGTCTTCTTGCTACTAAAGTAGTGGCTGCTAAAGACCCTTATGTTTATGCCTCACCACCGCCACCTCCGTCATGGAAGTCTCCACCACCTCCATCACTATATTATTACAAATCTCCACCACCTCCACCGTATATCTATAAGTCACCTCCTCCACCTTCTCCACCATTGCCACCTCCATACATTTATAAATCACCACCACCACCATCACCATCTCCGACACCACCATACTATTATAAATCACCACCTCAATCATCACTTTCTCCTTCACCTCCTTATTACTACACGTCTCCACTTCCACCATCTCTATCACCACCTCCTCCATACGTTTATAAGTCACCACCACTGCCTTACATTTATAAGTCTCCACATCCACCGTCCACTTACCCACCACCATCTTATGAACACAAATCACCACATCTTCCACATGAGAGACCACAAGCACCATATCACTATAAATCTCCACCGTCTACATATGTTTACAAATCTCCTCCGCCACCATTACAATCCCTACCACCTCCTTACATATATAAATCCCTACCTCCACCTTCTCTATCGCCACCTCCACCATATGTCTATAAATCTGCCCCGCCTCCAACTCCTTCATCTCCTCCACCATATTACTATAAGTCTCCCCCTCCACCCTCTCCACCTCCTCCACCTCCATATGTTTATAAATCTCCTCCACCACCTTCACTATCCCCACCACCTCCTTACATCTATAAATCTCCTCCTCCGTCATCTCCATCACTGCCTCCTCCATACGTTTACAAATCTCCTCCTCCACCATTTCCATCTCCACCGCCGCCCTATGTTTACAAATCTCCCCCACCACCACCATCATCTCCACCACCTCCCTATATCTATAAGTTTCCCCCTCCTCCATCTCCATCTCCACCTCCTCCATATATTTACAAATCTCCTCCACCACCCTTACCATCCCCACCACCTCCTTACATCTATAAATCTCCCCCTCCACCATCGTCATCACCACCTCCTCCATATGTTTACAAATCTCCCCCACCTCCATCTCCTTCACCTCCTCCACCATACTACTATAAGTCTCCCCCTCCACCGTCTCTCTCTCCACCGCCTCCGTATGTTTACAAATCTCCTCCACCACCATCACCATCCCCACCACCTCCTTACATCTATAAATCCCCCTCTCCACCATCTCCATCACCTCCACCTCCATATGTTTACAAATCTCCCCCGCCTCCATCACCTTCACCTCCCCCATCATACTACTATAAGTCTCCCCCTCTGCCATCTCCATCTCCACCGCCTCCATATGTTTATAAATCTACTCCACCACCCTCACCATCCCCACCACCTCCTTACATCTATAAATCCCCACCTCCACCTTCACCATCACCACCTCCTCCATATATCTACAAATCTTCCCCACCTCCATCTCCTTCGCCACCTCCACCATACTATTATAAGTCTCCCCCTCCACCATTTCTCTCTCCACCACCTCCATATATTTACAAATCTCCTCCACTTCCATCTCCTCCTCCACCATACTACTACAAGTCTCCCCCTCCCCCTCCACCATCTCCATCTCCACCACCGCCTTACATCTATAAATCCCCCCCACCTCCATCTCCATCACCACCTCCTCCATATGTTTACAAATCTCCTCCATCCCCTTCTCCATCACCTCCTCCACCGTACTATTACAAGTCTCCACCTCCACCATCTCCATCACCGCCTCCTCCATATCTTTACAAGTCTCCACCACCACATTCACCAATACTACCATCTCCTTACTTCTATAAGTCTCCACCTCCTCCATCTCCATCATCACCTCTCCCATATTATTAA

Protein sequence

MEISKPPGHWLPMFWVVTLCLLATKVVAAKDPYVYASPPPPPSWKSPPPPSLYYYKSPPPPPYIYKSPPPPSPPLPPPYIYKSPPPPSPSPTPPYYYKSPPQSSLSPSPPYYYTSPLPPSLSPPPPYVYKSPPLPYIYKSPHPPSTYPPPSYEHKSPHLPHERPQAPYHYKSPPSTYVYKSPPPPLQSLPPPYIYKSLPPPSLSPPPPYVYKSAPPPTPSSPPPYYYKSPPPPSPPPPPPYVYKSPPPPSLSPPPPYIYKSPPPSSPSLPPPYVYKSPPPPFPSPPPPYVYKSPPPPPSSPPPPYIYKFPPPPSPSPPPPYIYKSPPPPLPSPPPPYIYKSPPPPSSSPPPPYVYKSPPPPSPSPPPPYYYKSPPPPSLSPPPPYVYKSPPPPSPSPPPPYIYKSPSPPSPSPPPPYVYKSPPPPSPSPPPSYYYKSPPLPSPSPPPPYVYKSTPPPSPSPPPPYIYKSPPPPSPSPPPPYIYKSSPPPSPSPPPPYYYKSPPPPFLSPPPPYIYKSPPLPSPPPPYYYKSPPPPPPSPSPPPPYIYKSPPPPSPSPPPPYVYKSPPSPSPSPPPPYYYKSPPPPSPSPPPPYLYKSPPPHSPILPSPYFYKSPPPPSPSSPLPYY
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005199 structural constituent of cell wall
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G063590.1Cla97C03G063590.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 90..107
score: 42.22
coord: 50..71
score: 37.27
coord: 38..50
score: 52.31
coord: 71..87
score: 44.71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..574
NoneNo IPR availablePANTHERPTHR36586FAMILY NOT NAMEDcoord: 279..459
coord: 124..297

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C03G063590Cla006290Watermelon (97103) v1wmwmbB125
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G063590Watermelon (97103) v2wmbwmbB093
Cla97C03G063590Silver-seed gourdcarwmbB0178
Cla97C03G063590Silver-seed gourdcarwmbB0490
Cla97C03G063590Silver-seed gourdcarwmbB0546
Cla97C03G063590Silver-seed gourdcarwmbB0967
Cla97C03G063590Cucumber (Gy14) v2cgybwmbB041
Cla97C03G063590Cucumber (Gy14) v2cgybwmbB508
Cla97C03G063590Cucumber (Gy14) v1cgywmbB029
Cla97C03G063590Cucumber (Gy14) v1cgywmbB241
Cla97C03G063590Cucurbita maxima (Rimu)cmawmbB060
Cla97C03G063590Cucurbita maxima (Rimu)cmawmbB115
Cla97C03G063590Cucurbita maxima (Rimu)cmawmbB593
Cla97C03G063590Cucurbita maxima (Rimu)cmawmbB912
Cla97C03G063590Cucurbita moschata (Rifu)cmowmbB046
Cla97C03G063590Cucurbita moschata (Rifu)cmowmbB100
Cla97C03G063590Cucurbita moschata (Rifu)cmowmbB568
Cla97C03G063590Cucurbita moschata (Rifu)cmowmbB618
Cla97C03G063590Cucurbita moschata (Rifu)cmowmbB884
Cla97C03G063590Wild cucumber (PI 183967)cpiwmbB043
Cla97C03G063590Wild cucumber (PI 183967)cpiwmbB561
Cla97C03G063590Cucumber (Chinese Long) v3cucwmbB041
Cla97C03G063590Cucumber (Chinese Long) v3cucwmbB558
Cla97C03G063590Cucumber (Chinese Long) v2cuwmbB042
Cla97C03G063590Cucumber (Chinese Long) v2cuwmbB537
Cla97C03G063590Bottle gourd (USVL1VR-Ls)lsiwmbB065
Cla97C03G063590Bottle gourd (USVL1VR-Ls)lsiwmbB180
Cla97C03G063590Bottle gourd (USVL1VR-Ls)lsiwmbB365
Cla97C03G063590Melon (DHL92) v3.6.1medwmbB176
Cla97C03G063590Melon (DHL92) v3.6.1medwmbB235
Cla97C03G063590Melon (DHL92) v3.6.1medwmbB371
Cla97C03G063590Melon (DHL92) v3.5.1mewmbB190
Cla97C03G063590Melon (DHL92) v3.5.1mewmbB249
Cla97C03G063590Melon (DHL92) v3.5.1mewmbB381
Cla97C03G063590Watermelon (Charleston Gray)wcgwmbB186
Cla97C03G063590Watermelon (97103) v1wmwmbB335
Cla97C03G063590Wax gourdwgowmbB630
Cla97C03G063590Wax gourdwgowmbB638