Cla97C03G062460 (gene) Watermelon (97103) v2

Overview
NameCla97C03G062460
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionNADH dehydrogenase subunit 2
LocationCla97Chr03 : 23241776 .. 23244345 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAATCTGAACTCAACCCTGTCGCTCTTCTTTCTTTCCTCGCGGGCAGGAAGCACACCAGCTGCGTGCCTTGCGTGATTCTACTGTGTTTTTTGCACTTGACTGGGTGGACAGTTGACCGGAAGAGAACTTCGATTCGCCCGGCCAGCAGGCGGGCGGCGTGCTTATCTTATGTGACAACACTACAGAGCGAGTGGCTCTTCTAGGCGGGCTGCTGTGTGACAACACTACAGAGAAAGCGGCGCTTTCGTGTAACATGGTATTGCTTCCTTGCATGCCCGCTTTCAAGGGTCAAATAGGACTAGTCGTACGCAGCAACCTAGGTCTAAGAAAATGGTAAGCGACGTTTATTAGAAGGGTAAGCCAAGTCCGGTAGGTCAAAATTGAGGGGTCTAGTGGTCTAATAATATTACTGAATAATATCTCTCATTAGGGAAGAAATAGCCCAGAACGTTCATTAGTGTACTGCAACCGCTAGGAGAATTCAAATAATAATCCAGTTCCTAGAACATCGTACAAAGATAAGGGAGAAATATGAGATATGCCCTATACCCAGGACTAGCTATCTGACATATTCGATTGATTTTCGTACTGACTGAAGAAGACAAAATATCAGGTGCCAATGAAGGTCTATTTCCTTCATCAATCTCGTATATAAGTCTTTGAGATATCAATGGAATGAATGTGGTTTACCAAGGAAATGGCAGGCATTTCGTGAGATGTTCTACCTTTTCCGGCATTACATGCATAAGTAGCCTCATTTCAAATCATGTTTGAGCCTATGTTCAAACCAAACCCACCCCTATTTGTTTGTTTGAATAAGGCTAGAAAGAATGCCCGCCAAGTTCAGATAAGGAAATGCTTCCCCCAACCATTAAAGGAAAGGCTCGACGAAGGGAGGGGAAGGAAAACGCTTTCGGAGATCGAGATTGGATTTCTTTTTCATCAAAAACGAAGAAGGCCGAGGATGGCCTACGGTGCGTGTTATCTGAAGGGAACACGCTTTTTCGACCGCGGTGTGGTATGATTGCCGGGCCCTCTCCTCGTTCCGCCCGCTGGCCTATTAGGTAGGATAGCAGTCTGAGGGCTTTGCCTGCCCTTTCTCATAAAGAATTCCGGCTTGGCCCGGGAAAGCGCTGGCAACAAAAGAAAGGAAGGGGTCCATGTAGCTGCTGCGCCCGCCCCCTTCTTAGTCAATGGGGCAGCAGGTTCGGCATCCACTAGAAAAGAGAGAATCCACTTCAGATAACCACGCCTCTGCTAGGCAGCGTGTGGAATGGCCGAGAGCGGACCTTTTTGGATATATAATCCAAGTCGAGAGTGGAGTTACGGAAACAGCCGTCTGATGGAAAACGACTTTCACGTTCGGTTCAGAGAGCACTTTTTTCGTTGAGAATTCCTCGTTCCCTTTCGTGTGAATTCCCCAGCGGCGAATTCGAAACTTGTGGGGCCCTATCTATTCCATCTCTCAAGCCCCGAAGAAAACCCCCCTCCCCTTCGGACTCCATATCTCTTTTGACTCTATATATGTGGGCACCTGATATCTATGAGGGTTCACCCACCCCGGTTACAGCATTCCTTTCTATTGCGCCTAAAATCTCTATTTTTGCTAATATTTCACGTGTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTTCTTTTTCTGCAGCATTGCTTCTATGATCTTAGGAGCACTGGGGTGGAGTCGAGCTATTTATTGGCAGCTTCGCCTATCTATTCTATTATGGCCGGCTTGGAGACAGAAGAGGAAGACCATCATCCCTATCCGGGTACGATCATAGCTTTATTCATTCGTTGAACCTTGGGGATAACCATTAGCATTGAGGTCAATCACCACACCACCTCTATCATACATACGACATTCCATTCCGCGAGAGTGCATGGTCAACACACACCTAAAGCGCCTACGTTCCGCTTGCAGCCAATACAACCACAACCTAACTTGCACGAGATTCTACAACCGAAACTACTGGTAGTCTCGAGGGGACTCCTCCTATAATAGTTAGCAGTACTGAACAAGCGAGTCATCGGTCCGGAGAAAGAAAAGGACCTCCTTTGAAAAAAAAAGGAACTCGCTTTCCTCTCCATCAATAAATGGACCATTTGTTACGGAGACACAAGACAAACCTAGAAAGCATTTTTTCCGCAAATCATCTCGAGGCTTTCAAACAAGGGCATCCAAGCAATTGGTATCCCATTGAAACATAGAAACCATAGATTCGCGTCGCCTACTTGCTTCAAGCACAAATGGAATGGCTGATCATTCATTGAATTCTATGAAGTTTTTAAGACTTCACTAATCAGGCTTACACTTTTGAGTTCATAATGAATGAAATTCACCCCCGGATGAAGATCAAATCTCCCCTCCTTTTTACTAAACCATGGGGAGCCCCGAGTAGTTTACCGGGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCATCACGAGACTGATCGGATCTGCCGTAGACACCCGAGAGACCTCCACAAGGCAGACTCAAAGA

mRNA sequence

ATGGTCAAATCTGAACTCAACCCTGTCGCTCTTCTTTCTTTCCTCGCGGGCAGGAAGCACACCAGCTGCGTGCCTTGCGTGATTCTACTGTGTTTTTTGCACTTGACTGGGTGGACAGTTGACCGGAAGAGAACTTCGATTCGCCCGGCCAGCAGGCGGGCGGCGTGCTTATCTTATAAAGAATGCCCGCCAAGTTCAGATAAGGAAATGCTTCCCCCAACCATTAAAGGAAAGGCTCGACGAAGGGAGGGGAAGGAAAACGCTTTCGGAGATCGAGATTGGATTTCTTTTTCATCAAAAACGAAGAAGGCCGAGGATGGCCTACGGTGCGTGTTATCTGAAGGGAACACGCTTTTTCGACCGCGGTGTGGTATGATTGCCGGGCCCTCTCCTCGTTCCGCCCGCTGGCCTATTAGTCTGAGGGCTTTGCCTGCCCTTTCTCATAAAGAATTCCGGCTTGGCCCGGGAAAGCGCTGGCAACAAAAGAAAGGAAGGGGTCCATGTAGCTGCTGCGCCCGCCCCCTTCTTAGTCAATGGGGCAGCAGAGTGGAGTTACGGAAACAGCCGTCTGATGGAAAACGACTTTCACGTTCGGTTCAGAGAGCACTTTTTTCGTTGAGAATTCCTCGTTCCCTTTCGTGTGAATTCCCCAGCGGCGAATTCGAAACTTGTGGGGCCCTATCTATTCCATCTCTCAAGCCCCGAAGAAAACCCCCCTCCCCTTCGGACTCCATATCTCTTTTGACTCTATATATGTGGGCACCTGATATCTATGAGGGTTCACCCACCCCGGTTACAGCATTCCTTTCTATTGCGCCTAAAATCTCTATTTTTGCTAATATTTCACGTGTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTTCTTTTTCTGCAGCATTGCTTCTATGATCTTAGGAGCACTGGGGTGGAGTCGAGCTATTTATTGGCAGCTTCGCCTATCTATTCTATTATGGCCGGCTTGGAGACAGAAGAGGAAGACCATCATCCCTATCCGGGCTTACACTTTTGAGTTCATAATGAATGAAATTCACCCCCGGATGAAGATCAAATCTCCCCTCCTTTTTACTAAACCATGGGGAGCCCCGAGTAGTTTACCGGGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCATCACGAGACTGATCGGATCTGCCGTAGACACCCGAGAGACCTCCACAAGGCAGACTCAAAGA

Coding sequence (CDS)

ATGGTCAAATCTGAACTCAACCCTGTCGCTCTTCTTTCTTTCCTCGCGGGCAGGAAGCACACCAGCTGCGTGCCTTGCGTGATTCTACTGTGTTTTTTGCACTTGACTGGGTGGACAGTTGACCGGAAGAGAACTTCGATTCGCCCGGCCAGCAGGCGGGCGGCGTGCTTATCTTATAAAGAATGCCCGCCAAGTTCAGATAAGGAAATGCTTCCCCCAACCATTAAAGGAAAGGCTCGACGAAGGGAGGGGAAGGAAAACGCTTTCGGAGATCGAGATTGGATTTCTTTTTCATCAAAAACGAAGAAGGCCGAGGATGGCCTACGGTGCGTGTTATCTGAAGGGAACACGCTTTTTCGACCGCGGTGTGGTATGATTGCCGGGCCCTCTCCTCGTTCCGCCCGCTGGCCTATTAGTCTGAGGGCTTTGCCTGCCCTTTCTCATAAAGAATTCCGGCTTGGCCCGGGAAAGCGCTGGCAACAAAAGAAAGGAAGGGGTCCATGTAGCTGCTGCGCCCGCCCCCTTCTTAGTCAATGGGGCAGCAGAGTGGAGTTACGGAAACAGCCGTCTGATGGAAAACGACTTTCACGTTCGGTTCAGAGAGCACTTTTTTCGTTGAGAATTCCTCGTTCCCTTTCGTGTGAATTCCCCAGCGGCGAATTCGAAACTTGTGGGGCCCTATCTATTCCATCTCTCAAGCCCCGAAGAAAACCCCCCTCCCCTTCGGACTCCATATCTCTTTTGACTCTATATATGTGGGCACCTGATATCTATGAGGGTTCACCCACCCCGGTTACAGCATTCCTTTCTATTGCGCCTAAAATCTCTATTTTTGCTAATATTTCACGTGTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTTCTTTTTCTGCAGCATTGCTTCTATGATCTTAGGAGCACTGGGGTGGAGTCGAGCTATTTATTGGCAGCTTCGCCTATCTATTCTATTATGGCCGGCTTGGAGACAGAAGAGGAAGACCATCATCCCTATCCGGGCTTACACTTTTGAGTTCATAATGAATGAAATTCACCCCCGGATGAAGATCAAATCTCCCCTCCTTTTTACTAAACCATGGGGAGCCCCGAGTAGTTTACCGGGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCATCACGAGACTGATCGGATCTGCCGTAGACACCCGAGAGACCTCCACAAGGCAGACTCAAAGA

Protein sequence

MVKSELNPVALLSFLAGRKHTSCVPCVILLCFLHLTGWTVDRKRTSIRPASRRAACLSYKECPPSSDKEMLPPTIKGKARRREGKENAFGDRDWISFSSKTKKAEDGLRCVLSEGNTLFRPRCGMIAGPSPRSARWPISLRALPALSHKEFRLGPGKRWQQKKGRGPCSCCARPLLSQWGSRVELRKQPSDGKRLSRSVQRALFSLRIPRSLSCEFPSGEFETCGALSIPSLKPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIASMILGALGWSRAIYWQLRLSILLWPAWRQKRKTIIPIRAYTFEFIMNEIHPRMKIKSPLLFTKPWGAPSSLPGKLSCRDDTLLFLVEDRKRLLFITRLIGSAVDTRETSTRQTQR
Homology
[Close]
BLAST of Cla97C03G062460 vs. NCBI nr
Match: XP_024449890.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC112326444, partial [Populus trichocarpa])

HSP 1 Score: 247.7 bits (631), Expect = 7.1e-62
Identity = 146/235 (62.13%), Postives = 160/235 (68.09%), Query Frame = 0 

Query: 82  REGKENAFGDRDWISFSSKTKKAEDGLRCVLSEGNTLFRPRCGMIAGPSPRSARWPISLR 141
           R GKEN  GDRD+I FSSKTKK EDGLRCVLSEG  LFRPR     GPSPR ARWPI + 
Sbjct: 37  RRGKENTCGDRDFICFSSKTKKTEDGLRCVLSEG--LFRPR--WYXGPSPRCARWPIGIA 96

Query: 142 ALPALSHKEFRLGPGKRWQQKKGRGPCSCCARPLLSQWGSRVELRKQPSDGKR-----LS 201
           A                       G C     PL       + ++K  S+ ++      +
Sbjct: 97  AF----------------------GLC----LPL------XIRIKKSASNNRKEGVYEAA 156

Query: 202 RSVQRALFSLRIPRSLSCEFPSGEFETCGALSIPSLKPRRKPPSPSDSISLLTLYMWAPD 261
           R +Q ALF L+IPRSLSCEFPS +F+TCGALSIPSLKPR KP SPSD + LLTLYMWAPD
Sbjct: 157 RPLQIALFLLKIPRSLSCEFPSDKFKTCGALSIPSLKPRIKPHSPSDYLILLTLYMWAPD 216

Query: 262 IYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           IYEGSPT VTAFL IAPKI I ANIS VSIYGSYGATLQQIF FCSIASMILGAL
Sbjct: 217 IYEGSPTSVTAFLFIAPKIFISANISCVSIYGSYGATLQQIFXFCSIASMILGAL 235

[Close]
BLAST of Cla97C03G062460 vs. NCBI nr
Match: PRQ15618.1 (putative NADH:ubiquinone reductase (H(+)-translocating) (mitochondrion) [Rosa chinensis])

HSP 1 Score: 235.0 bits (598), Expect = 4.8e-58
Identity = 142/211 (67.30%), Postives = 152/211 (72.04%), Query Frame = 0 

Query: 125 MIAGPSPRSARWPISLRALP-ALSHKEFRLGPGKRWQQKKG---------------RGPC 184
           MIAGPSPRSAR PI + AL   L  K+          +K+G                G  
Sbjct: 1   MIAGPSPRSARRPIGIAALGLCLPFKKGSARESAGNNRKEGVHVAAAPAPFLVNGAAGSA 60

Query: 185 SC-------CARPLLSQWGSRVELRKQPSDGKRLSRSVQRALFSLRIPRSLSCEFPSGEF 244
           S         + PLL   GS VELR+QPSDGK+LSRSVQRALFSLRIPRSLSCEFP  EF
Sbjct: 61  STIKERIRFLSEPLL---GSVVELREQPSDGKQLSRSVQRALFSLRIPRSLSCEFPCNEF 120

Query: 245 ETCGALSIPSL-KPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFAN 304
           +TCGALSI SL +  +K PSPSDS SLLTLYMWAPDIYEGSPTPVTAFLSIAPKISI AN
Sbjct: 121 QTCGALSIYSLSRAPKKTPSPSDSTSLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISAN 180

Query: 305 ISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           ISRVSIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 181 ISRVSIYGSYGATLQQIFFFCSIASMILGAL 208

[Close]
BLAST of Cla97C03G062460 vs. NCBI nr
Match: CBI23503.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 229.9 bits (585), Expect = 1.5e-56
Identity = 135/219 (61.64%), Postives = 141/219 (64.38%), Query Frame = 0 

Query: 94  WISFSSKTKKAEDGLRCVLSEGNTLFRPRCGMIAGPSPRSARWPISLRALPALSHKEFRL 153
           +I FSSKTKKAEDGLRC                             LRALPAL +KEFRL
Sbjct: 165 FICFSSKTKKAEDGLRC-----------------------------LRALPALYNKEFRL 224

Query: 154 GPGKRWQQKKGRGPCSCCARPLLSQWGSRVELRKQPSDGKRLSRSVQRALFSLRIPRSLS 213
           GPGKRWQQ+KGRGPCSCCARPLLSQWGSR                     F +   R   
Sbjct: 225 GPGKRWQQQKGRGPCSCCARPLLSQWGSR---------------------FGIYYKR--- 284

Query: 214 CEFPSGEFETCGALSIPSL-KPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIA 273
                   E    ++ P L  PRRK PSPSDSISLLTLYMWAPDIYEGSPTPVTAFL IA
Sbjct: 285 --------ENPLQITTPLLGSPRRKAPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLFIA 322

Query: 274 PKISIFANISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           PKISI ANISRVSIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 345 PKISISANISRVSIYGSYGATLQQIFFFCSIASMILGAL 322

[Close]
BLAST of Cla97C03G062460 vs. NCBI nr
Match: PIA41049.1 (hypothetical protein AQUCO_02300080v1 [Aquilegia coerulea])

HSP 1 Score: 181.0 bits (458), Expect = 8.2e-42
Identity = 104/172 (60.47%), Postives = 113/172 (65.70%), Query Frame = 0 

Query: 140 LRALPALSHKEFRLGPGKRWQQKKGRGPCSCCARPLLSQWGSRVELRKQPSDGKRLSRSV 199
           LRALPALS+KEFRLGPGKRWQQ+KGRGPCSCCARPL S++G   + R+ P          
Sbjct: 64  LRALPALSNKEFRLGPGKRWQQQKGRGPCSCCARPLSSRFGIYYKKRENPLQ-------- 123

Query: 200 QRALFSLRIPRSLSCEFPSGEFETCGALSIPSLKPRRKPPSPSDSISLLTLYMWAPDIYE 259
                +  +P S                      PRRKPPSPSDSISLLTLYMWAPDIYE
Sbjct: 124 ----ITTPLPGS----------------------PRRKPPSPSDSISLLTLYMWAPDIYE 183

Query: 260 GSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           GSPTPVTAFLSIAPKISI A            +TLQQIFFFCSIASMILGAL
Sbjct: 184 GSPTPVTAFLSIAPKISISAI-----------STLQQIFFFCSIASMILGAL 190

[Close]
BLAST of Cla97C03G062460 vs. NCBI nr
Match: OTF84697.1 (putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit (mitochondrion) [Helianthus annuus])

HSP 1 Score: 178.7 bits (452), Expect = 4.1e-41
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 219 GEFETCGALSIPSLKPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIF 278
           GEF+TCGALSIPSL+PRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISI 
Sbjct: 32  GEFKTCGALSIPSLEPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIS 91

Query: 279 ANISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           ANISR+SIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 92  ANISRLSIYGSYGATLQQIFFFCSIASMILGAL 124

[Close]
BLAST of Cla97C03G062460 vs. TrEMBL
Match: tr|A0A2P6P115|A0A2P6P115_ROSCH (Putative NADH:ubiquinone reductase (H(+)-translocating) OS=Rosa chinensis OX=74649 GN=RchiOBHm_MTg0498511 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 3.2e-58
Identity = 142/211 (67.30%), Postives = 152/211 (72.04%), Query Frame = 0 

Query: 125 MIAGPSPRSARWPISLRALP-ALSHKEFRLGPGKRWQQKKG---------------RGPC 184
           MIAGPSPRSAR PI + AL   L  K+          +K+G                G  
Sbjct: 1   MIAGPSPRSARRPIGIAALGLCLPFKKGSARESAGNNRKEGVHVAAAPAPFLVNGAAGSA 60

Query: 185 SC-------CARPLLSQWGSRVELRKQPSDGKRLSRSVQRALFSLRIPRSLSCEFPSGEF 244
           S         + PLL   GS VELR+QPSDGK+LSRSVQRALFSLRIPRSLSCEFP  EF
Sbjct: 61  STIKERIRFLSEPLL---GSVVELREQPSDGKQLSRSVQRALFSLRIPRSLSCEFPCNEF 120

Query: 245 ETCGALSIPSL-KPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFAN 304
           +TCGALSI SL +  +K PSPSDS SLLTLYMWAPDIYEGSPTPVTAFLSIAPKISI AN
Sbjct: 121 QTCGALSIYSLSRAPKKTPSPSDSTSLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISAN 180

Query: 305 ISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           ISRVSIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 181 ISRVSIYGSYGATLQQIFFFCSIASMILGAL 208

[Close]
BLAST of Cla97C03G062460 vs. TrEMBL
Match: tr|F6H891|F6H891_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0505g00030 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.0e-56
Identity = 135/219 (61.64%), Postives = 141/219 (64.38%), Query Frame = 0 

Query: 94  WISFSSKTKKAEDGLRCVLSEGNTLFRPRCGMIAGPSPRSARWPISLRALPALSHKEFRL 153
           +I FSSKTKKAEDGLRC                             LRALPAL +KEFRL
Sbjct: 165 FICFSSKTKKAEDGLRC-----------------------------LRALPALYNKEFRL 224

Query: 154 GPGKRWQQKKGRGPCSCCARPLLSQWGSRVELRKQPSDGKRLSRSVQRALFSLRIPRSLS 213
           GPGKRWQQ+KGRGPCSCCARPLLSQWGSR                     F +   R   
Sbjct: 225 GPGKRWQQQKGRGPCSCCARPLLSQWGSR---------------------FGIYYKR--- 284

Query: 214 CEFPSGEFETCGALSIPSL-KPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIA 273
                   E    ++ P L  PRRK PSPSDSISLLTLYMWAPDIYEGSPTPVTAFL IA
Sbjct: 285 --------ENPLQITTPLLGSPRRKAPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLFIA 322

Query: 274 PKISIFANISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           PKISI ANISRVSIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 345 PKISISANISRVSIYGSYGATLQQIFFFCSIASMILGAL 322

[Close]
BLAST of Cla97C03G062460 vs. TrEMBL
Match: tr|A0A2G5DBZ0|A0A2G5DBZ0_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02300080v1 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.4e-42
Identity = 104/172 (60.47%), Postives = 113/172 (65.70%), Query Frame = 0 

Query: 140 LRALPALSHKEFRLGPGKRWQQKKGRGPCSCCARPLLSQWGSRVELRKQPSDGKRLSRSV 199
           LRALPALS+KEFRLGPGKRWQQ+KGRGPCSCCARPL S++G   + R+ P          
Sbjct: 64  LRALPALSNKEFRLGPGKRWQQQKGRGPCSCCARPLSSRFGIYYKKRENPLQ-------- 123

Query: 200 QRALFSLRIPRSLSCEFPSGEFETCGALSIPSLKPRRKPPSPSDSISLLTLYMWAPDIYE 259
                +  +P S                      PRRKPPSPSDSISLLTLYMWAPDIYE
Sbjct: 124 ----ITTPLPGS----------------------PRRKPPSPSDSISLLTLYMWAPDIYE 183

Query: 260 GSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           GSPTPVTAFLSIAPKISI A            +TLQQIFFFCSIASMILGAL
Sbjct: 184 GSPTPVTAFLSIAPKISISAI-----------STLQQIFFFCSIASMILGAL 190

[Close]
BLAST of Cla97C03G062460 vs. TrEMBL
Match: tr|A0A1Y3BX49|A0A1Y3BX49_HELAN (Putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit OS=Helianthus annuus OX=4232 GN=HannXRQ_MTg0579071 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.7e-41
Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 0 

Query: 219 GEFETCGALSIPSLKPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIF 278
           GEF+TCGALSIPSL+PRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISI 
Sbjct: 32  GEFKTCGALSIPSLEPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIS 91

Query: 279 ANISRVSIYGSYGATLQQIFFFCSIASMILGAL 312
           ANISR+SIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 92  ANISRLSIYGSYGATLQQIFFFCSIASMILGAL 124

[Close]
BLAST of Cla97C03G062460 vs. TrEMBL
Match: tr|A0A0D2NAB2|A0A0D2NAB2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G164600 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-35
Identity = 104/199 (52.26%), Postives = 110/199 (55.28%), Query Frame = 0 

Query: 117 TLFRPRCGMIAGPSPRSARWPISLRA----LPALSHKEFRLGPGKRWQQKKGRGPCSCCA 176
           T F  R GMIAG SPRSARWPI + A    LP +              +K+G    +  A
Sbjct: 11  TRFFDRGGMIAGASPRSARWPIGIAAFGLCLPFIIKNSGSARESAGNNRKEGVHVTAAPA 70

Query: 177 RPLLSQWGSRVELRKQPSDGKRLSRSVQRALFSLRIPRSLSCEFPSGEFETCGALSIPSL 236
            PLL+QWGS                                                   
Sbjct: 71  -PLLNQWGS--------------------------------------------------- 130

Query: 237 KPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGA 296
              RK PSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISI ANISRVSIYGSYGA
Sbjct: 131 ---RKTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGA 154

Query: 297 TLQQIFFFCSIASMILGAL 312
           TLQQIFFFCSIASMILGAL
Sbjct: 191 TLQQIFFFCSIASMILGAL 154

[Close]
BLAST of Cla97C03G062460 vs. Swiss-Prot
Match: sp|P15688|NU2M_BETVU (NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris OX=161934 GN=ND2 PE=3 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-39
Identity = 124/276 (44.93%), Postives = 139/276 (50.36%), Query Frame = 0 

Query: 70  MLPPTIKGKARRREGKENAFGDRDWISFSSKTKKAEDGLRCVLSEGNTLFRPRCGMIAGP 129
           ML  TIKGKARRR  KE AFGDRD+++FSSKTKK E+    +  E  T F  R GMI GP
Sbjct: 1   MLSLTIKGKARRR--KERAFGDRDFLTFSSKTKKTEN--VNLSFEKGTRFFDRGGMIFGP 60

Query: 130 SPRSARWPISLRA----LPALSHKEFRLGPGKRWQQKKGRGPCSCCARPLLSQWGSRVEL 189
           SPRSARWPI + A    L  L              +K+G    +  A  L+++       
Sbjct: 61  SPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAAGSATT 120

Query: 190 RKQPSDGK-------------------------------------RLSRSVQRALFSLRI 249
            K+    K                                         SVQRALFSLRI
Sbjct: 121 TKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRALFSLRI 180

Query: 250 PRSLSCEFPSGEFETCGALSIPSLKPRRKPPSPSDSISLLTLYMWAPDIYEGSPTPVTAF 305
            RSL         +     SIPS  P  K P P         YMWAPDIYEGSPTPVTAF
Sbjct: 181 LRSLRVN-SLARIQNFWGPSIPSSSP-AKTPLPFGLNIFFDSYMWAPDIYEGSPTPVTAF 240

[Close]
BLAST of Cla97C03G062460 vs. Swiss-Prot
Match: sp|O05000|NU2M_ARATH (NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana OX=3702 GN=ND2 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 2.8e-25
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 245 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIA 304
           I+ +  +MWAPDIYEGSPTPVTAFLSIAPKISIFANI RV IYGSYGATLQQIFFFCSIA
Sbjct: 241 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIA 300

Query: 305 SMILGAL 312
           SMILGAL
Sbjct: 301 SMILGAL 307

[Close]
BLAST of Cla97C03G062460 vs. Swiss-Prot
Match: sp|P93401|NU2M_OENBE (NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera berteroana OX=3950 GN=ND2 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 2.8e-25
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 245 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIA 304
           I+ +  +MWAPDIYEGSPTPVTAFLSIAPKISIFANI RV IYGSYGATLQQIFFFCSIA
Sbjct: 230 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIA 289

Query: 305 SMILGAL 312
           SMILGAL
Sbjct: 290 SMILGAL 296

[Close]
BLAST of Cla97C03G062460 vs. Swiss-Prot
Match: sp|P26846|NU2M_MARPO (NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha OX=3197 GN=ND2 PE=3 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 8.7e-19
Identity = 48/67 (71.64%), Postives = 54/67 (80.60%), Query Frame = 0 

Query: 245 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIA 304
           I+ +  +MWAPD+YEGSPT VTAF SIAPKISI AN+ RV IY  Y  T QQ+FFFCSIA
Sbjct: 231 ITAVPFHMWAPDVYEGSPTIVTAFFSIAPKISILANMLRVFIYSFYDPTWQQLFFFCSIA 290

Query: 305 SMILGAL 312
           SMILGAL
Sbjct: 291 SMILGAL 297

[Close]
BLAST of Cla97C03G062460 vs. Swiss-Prot
Match: sp|Q2NA79|NUON_ERYLH (NADH-quinone oxidoreductase subunit N OS=Erythrobacter litoralis (strain HTCC2594) OX=314225 GN=nuoN PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-10
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0 

Query: 245 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSI--YGSYGATLQQIFFFCS 304
           I+ +  +MW PD+YEG+PTPVT F + APK++  A  +RV++  +G      QQI  F +
Sbjct: 222 IAAVPFHMWTPDVYEGAPTPVTTFFATAPKVAAVALTARVALSPFGEQTEAWQQIVIFAA 281

Query: 305 IASMILGALG 313
           +AS++LGALG
Sbjct: 282 LASIVLGALG 291

[Close]
BLAST of Cla97C03G062460 vs. TAIR10
Match: ATMG00285.1 (NADH dehydrogenase 2A)

HSP 1 Score: 117.1 bits (292), Expect = 2.6e-26
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 245 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIA 304
           I+ +  +MWAPDIYEGSPTPVTAFLSIAPKISI ANI RVSIYGSYGATLQQIFFFCSIA
Sbjct: 241 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFCSIA 300

Query: 305 SMILGAL 312
           SMILGAL
Sbjct: 301 SMILGAL 307

[Close]
BLAST of Cla97C03G062460 vs. TAIR10
Match: ATMG01320.1 (NADH dehydrogenase 2B)

HSP 1 Score: 117.1 bits (292), Expect = 2.6e-26
Identity = 59/67 (88.06%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 245 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIA 304
           I+ +  +MWAPDIYEGSPTPVTAFLSIAPKISI ANI RVSIYGSYGATLQQIFFFCSIA
Sbjct: 241 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFCSIA 300

Query: 305 SMILGAL 312
           SMILGAL
Sbjct: 301 SMILGAL 307

[Close]
BLAST of Cla97C03G062460 vs. TAIR10
Match: AT2G07689.1 (NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-25
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0 

Query: 252 MWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFFFCSIASMILGAL 311
           MWAPDIYEGSPTPVTAFLSIAPKISI ANI RVSIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 1   MWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFCSIASMILGAL 60

[Close]
BLAST of Cla97C03G062460 vs. TAIR10
Match: ATCG00890.1 (NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 49.7 bits (117), Expect = 5.2e-06
Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 245 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQ--QIFFFCS 304
           +SL   + W PD+YEGSPTPV AFLS+  K++  A+ +R+     Y ++ +   +    +
Sbjct: 121 LSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 180

Query: 305 IASMILGAL 312
           I SMI G L
Sbjct: 181 ILSMIFGNL 189

[Close]
BLAST of Cla97C03G062460 vs. TAIR10
Match: ATCG01250.1 (NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 49.7 bits (117), Expect = 5.2e-06
Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 0 

Query: 245 ISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQ--QIFFFCS 304
           +SL   + W PD+YEGSPTPV AFLS+  K++  A+ +R+     Y ++ +   +    +
Sbjct: 121 LSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 180

Query: 305 IASMILGAL 312
           I SMI G L
Sbjct: 181 ILSMIFGNL 189

The following BLAST results are available for this feature:
BLAST of Cla97C03G062460 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_024449890.17.1e-6262.13LOW QUALITY PROTEIN: uncharacterized protein LOC112326444, partial [Populus tric... [more]
PRQ15618.14.8e-5867.30putative NADH:ubiquinone reductase (H(+)-translocating) (mitochondrion) [Rosa ch... [more]
CBI23503.31.5e-5661.64unnamed protein product, partial [Vitis vinifera][more]
PIA41049.18.2e-4260.47hypothetical protein AQUCO_02300080v1 [Aquilegia coerulea][more]
OTF84697.14.1e-4195.70putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit (mitochond... [more]
BLAST of Cla97C03G062460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P6P115|A0A2P6P115_ROSCH3.2e-5867.30Putative NADH:ubiquinone reductase (H(+)-translocating) OS=Rosa chinensis OX=746... [more]
tr|F6H891|F6H891_VITVI1.0e-5661.64Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0505g00030 PE=4 SV=... [more]
tr|A0A2G5DBZ0|A0A2G5DBZ0_AQUCA5.4e-4260.47Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02300080v1 PE=4... [more]
tr|A0A1Y3BX49|A0A1Y3BX49_HELAN2.7e-4195.70Putative NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit OS=Heliant... [more]
tr|A0A0D2NAB2|A0A0D2NAB2_GOSRA1.7e-3552.26Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G164600 PE=4 ... [more]
BLAST of Cla97C03G062460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P15688|NU2M_BETVU3.4e-3944.93NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris OX=161934 GN=ND2 PE=3 SV... [more]
sp|O05000|NU2M_ARATH2.8e-2588.06NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana OX=3702 GN=ND2 PE... [more]
sp|P93401|NU2M_OENBE2.8e-2588.06NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera berteroana OX=3950 GN=ND2 PE... [more]
sp|P26846|NU2M_MARPO8.7e-1971.64NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha OX=3197 GN=ND2 P... [more]
sp|Q2NA79|NUON_ERYLH2.5e-1045.71NADH-quinone oxidoreductase subunit N OS=Erythrobacter litoralis (strain HTCC259... [more]
BLAST of Cla97C03G062460 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00285.12.6e-2688.06NADH dehydrogenase 2A[more]
ATMG01320.12.6e-2688.06NADH dehydrogenase 2B[more]
AT2G07689.11.7e-2596.67NADH-Ubiquinone/plastoquinone (complex I) protein[more]
ATCG00890.15.2e-0639.13NADH-Ubiquinone/plastoquinone (complex I) protein[more]
ATCG01250.15.2e-0639.13NADH-Ubiquinone/plastoquinone (complex I) protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001750ND/Mrp_mem
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042773 ATP synthesis coupled electron transport
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G062460.1Cla97C03G062460.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 246..311
e-value: 4.9E-14
score: 52.1
NoneNo IPR availablePANTHERPTHR22773NADH DEHYDROGENASEcoord: 245..311
NoneNo IPR availablePANTHERPTHR22773:SF101NADH-UBIQUINONE/PLASTOQUINONE COMPLEX I PROTEINcoord: 245..311

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G062460Cucumber (Gy14) v1cgywmbB609
Cla97C03G062460Cucurbita moschata (Rifu)cmowmbB057
Cla97C03G062460Cucurbita moschata (Rifu)cmowmbB099
Cla97C03G062460Wild cucumber (PI 183967)cpiwmbB040
Cla97C03G062460Cucumber (Chinese Long) v3cucwmbB038
Cla97C03G062460Cucumber (Chinese Long) v2cuwmbB040
Cla97C03G062460Bottle gourd (USVL1VR-Ls)lsiwmbB365
Cla97C03G062460Melon (DHL92) v3.6.1medwmbB231
Cla97C03G062460Melon (DHL92) v3.5.1mewmbB246
Cla97C03G062460Watermelon (Charleston Gray)wcgwmbB186
Cla97C03G062460Wax gourdwgowmbB630
Cla97C03G062460Wax gourdwgowmbB641
Cla97C03G062460Silver-seed gourdcarwmbB0561
Cla97C03G062460Silver-seed gourdcarwmbB1022
Cla97C03G062460Cucumber (Gy14) v2cgybwmbB039