Cla97C03G062330 (gene) Watermelon (97103) v2

Overview
NameCla97C03G062330
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionNADH-ubiquinone oxidoreductase chain 1
LocationCla97Chr03 : 23188293 .. 23189871 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGTACTTCTACCGCATCAAAAAGGTACCTTCGAGCTCAGCTTTGTCATCTAGCTCGGGCTGTTCAAAAAGAAAAAGAGGTTCCAACTAAGAAGAACCGACCACCAGATCCGCTGGTCTGCAATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCGGAATATAATCCCAAAGTACTCCAAAGACCCAAATATAGTCAATCAAGAAGGTGGTCAGACTGAAGCGGAGTTCCCCAACAGCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGATCCGAACCACTACTAGACTAGACTAGTCGTTGAGTGACGTAGTGGTTTTTTCTATTAGTTGCGATGCGAACAGGCGTTTACTTATGAGATTTGTTGAGTAGGCTTGCGTTAGTTGTCTGCTATAAGATAGCTAGTTTTGGGGCTTTCGACATAAAAAAGCCGATCCGGCTTGGCTTCGCTATCGCTCATGACTTGTATTGTAGTCCTAGTCTTGTAGTCGGCCTGGAATGCCTTTGTAGTCTTTCTAATGCTAATGCCTTCTTCCTTCATTCATTTTCTTTTAGTTGCGGTAGCTCCCGCGCCAGCAAGATACAGACGGCGAAGCCAAAGCAATACTAAACGAGCAGCCGCCCTAACGAGACTCTTAGTCAAGCCTAAACGTCCTTATTGAAAACTAAAGCGCTAACGAGCAAGAAAAGGCCCCTTCCTATATCGAGAGATAGGCTAAGGCGCCTTTACTAATATTCTAATAGTTGGCCCCTCTTTCCTTTTTTGTTATTGAAAACGGGGCAACTTTCTCGCTTGTTGCTTTAGAAAGATGGCAGGGGCGCGTTAGCGCCCTTCCTTCAGCTGCCCCCGCCCTATCCCGGCCCGGAAGTTCGCTTCCGGCGACTAGCTTCTACCGCTAGCGCTTGGACTTGGAAGCAAGCTACAGCTACCTTGAATCAATCAATGAATGAAAAGAAAGCGCTTACCGAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGACCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGAGGCGAGAGTGTCACGTACGGTTCCTTTGAGAAGGGTGTGATACCACCACCTATCAGGCCCGACGAGCGGTCCACGGAGCTGCATCCCTACTCACCTGGTCCATGCACATCGCTCTCTCCAGGAGGTTGGCCGCCTATCCTAGATCTTCCCATTTTCAAGAAGATCCCGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTGTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGGTAGTCGCCGTTTCTGGTGTTTCAGTCACCTTTCAATGGCTCCCTTAA

mRNA sequence

ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGCCCGACGAGCGGTCCACGGAGCTGCATCCCTACTCACCTGGTCCATGCACATCGCTCTCTCCAGGAGGTTGGCCGCCTATCCTAGATCTTCCCATTTTCAAGAAGATCCCGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTGTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGGTAGTCGCCGTTTCTGGTGTTTCAGTCACCTTTCAATGGCTCCCTTAA

Coding sequence (CDS)

ATGGCTGTGATTCAATATGAAAAGGCCAGCACTCACTCTTCAGAAAATATCGAGATGCATGTAATAATCAAGGTTTTGATTCCAGAGTCAGATTGGGGAGACAACTCCTTCAAGGCTTTGACTTACATTCCGAGGAAGACTTTCCCAGCAACAGAAGAAAAGATTGCGAGGCCCGACGAGCGGTCCACGGAGCTGCATCCCTACTCACCTGGTCCATGCACATCGCTCTCTCCAGGAGGTTGGCCGCCTATCCTAGATCTTCCCATTTTCAAGAAGATCCCGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTGTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGGTAGTCGCCGTTTCTGGTGTTTCAGTCACCTTTCAATGGCTCCCTTAA

Protein sequence

MAVIQYEKASTHSSENIEMHVIIKVLIPESDWGDNSFKALTYIPRKTFPATEEKIARPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP
Homology
[Close]
BLAST of Cla97C03G062330 vs. NCBI nr
Match: CDY45523.1 (BnaCnng12820D [Brassica napus])

HSP 1 Score: 194.9 bits (494), Expect = 2.0e-46
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 57  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 116
           RPDERSTELHPYSPGPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAA
Sbjct: 3   RPDERSTELHPYSPGPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAA 62

Query: 117 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           FPRYRYDQLMGLGRKVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 63  FPRYRYDQLMGLGRKVFLPLSLARVVPVSGLLVTFQWLP 101

[Close]
BLAST of Cla97C03G062330 vs. NCBI nr
Match: YP_009306081.1 (NADH dehydrogenase subunit 1 (mitochondrion) [Corchorus capsularis] >AOO95919.1 NADH dehydrogenase subunit 1 (mitochondrion) [Corchorus capsularis])

HSP 1 Score: 194.9 bits (494), Expect = 2.0e-46
Identity = 93/109 (85.32%), Postives = 98/109 (89.91%), Query Frame = 0 

Query: 47  TFPATEEKIARPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF 106
           + P  +  I    +++TELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF
Sbjct: 179 SLPTEKYSILEKPKKATELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF 238

Query: 107 LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV VSGV VTFQWLP
Sbjct: 239 LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVVPVSGVLVTFQWLP 287

[Close]
BLAST of Cla97C03G062330 vs. NCBI nr
Match: AFY03534.1 (NADH dehydrogenase subunit I, partial (mitochondrion) [Lagenaria siceraria])

HSP 1 Score: 177.2 bits (448), Expect = 4.4e-41
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 1   GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 60

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVVAVSGVSVTFQWLP
Sbjct: 61  KVFLPLSLARVVAVSGVSVTFQWLP 85

[Close]
BLAST of Cla97C03G062330 vs. NCBI nr
Match: YP_009477451.1 (NADH dehydrogenase subunit 1 (mitochondrion) [Citrus sinensis] >AVW89066.1 NADH dehydrogenase subunit 1 (mitochondrion) [Citrus sinensis])

HSP 1 Score: 174.5 bits (441), Expect = 2.8e-40
Identity = 84/89 (94.38%), Postives = 84/89 (94.38%), Query Frame = 0 

Query: 67  PYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLM 126
           P   GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLM
Sbjct: 207 PIEDGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLM 266

Query: 127 GLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           GLGRKVFLPLSLARVV VSGV VTFQWLP
Sbjct: 267 GLGRKVFLPLSLARVVPVSGVLVTFQWLP 295

[Close]
BLAST of Cla97C03G062330 vs. NCBI nr
Match: YP_004849322.1 (NADH dehydrogenase subunit 1 (mitochondrion) [Cucumis sativus] >ADZ10749.1 NADH dehydrogenase subunit 1 (mitochondrion) [Cucumis sativus] >AEN56095.1 NADH dehydrogenase subunit 1 (mitochondrion) [Cucumis melo subsp. melo])

HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSG+SVTFQWLP
Sbjct: 301 KVFLPLSLARVVLVSGLSVTFQWLP 325

[Close]
BLAST of Cla97C03G062330 vs. TrEMBL
Match: tr|A0A1C9I9N2|A0A1C9I9N2_COCAP (NADH-ubiquinone oxidoreductase chain 1 OS=Corchorus capsularis OX=210143 GN=nad1 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46
Identity = 93/109 (85.32%), Postives = 98/109 (89.91%), Query Frame = 0 

Query: 47  TFPATEEKIARPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF 106
           + P  +  I    +++TELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF
Sbjct: 179 SLPTEKYSILEKPKKATELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILF 238

Query: 107 LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVV VSGV VTFQWLP
Sbjct: 239 LFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARVVPVSGVLVTFQWLP 287

[Close]
BLAST of Cla97C03G062330 vs. TrEMBL
Match: tr|A0A078I8S9|A0A078I8S9_BRANA (BnaCnng12820D protein OS=Brassica napus OX=3708 GN=BnaCnng12820D PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46
Identity = 92/99 (92.93%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 57  RPDERSTELHPYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAA 116
           RPDERSTELHPYSPGPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAA
Sbjct: 3   RPDERSTELHPYSPGPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAA 62

Query: 117 FPRYRYDQLMGLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           FPRYRYDQLMGLGRKVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 63  FPRYRYDQLMGLGRKVFLPLSLARVVPVSGLLVTFQWLP 101

[Close]
BLAST of Cla97C03G062330 vs. TrEMBL
Match: tr|K7ZCV5|K7ZCV5_LAGSI (NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Lagenaria siceraria OX=3668 GN=nad1 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.9e-41
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 1   GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 60

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVVAVSGVSVTFQWLP
Sbjct: 61  KVFLPLSLARVVAVSGVSVTFQWLP 85

[Close]
BLAST of Cla97C03G062330 vs. TrEMBL
Match: tr|A0A2R4LW59|A0A2R4LW59_CITSI (NADH-ubiquinone oxidoreductase chain 1 OS=Citrus sinensis OX=2711 GN=nad1 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.9e-40
Identity = 84/89 (94.38%), Postives = 84/89 (94.38%), Query Frame = 0 

Query: 67  PYSPGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLM 126
           P   GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLM
Sbjct: 207 PIEDGPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLM 266

Query: 127 GLGRKVFLPLSLARVVAVSGVSVTFQWLP 156
           GLGRKVFLPLSLARVV VSGV VTFQWLP
Sbjct: 267 GLGRKVFLPLSLARVVPVSGVLVTFQWLP 295

[Close]
BLAST of Cla97C03G062330 vs. TrEMBL
Match: tr|G3EU12|G3EU12_CUCME (NADH-ubiquinone oxidoreductase chain 1 OS=Cucumis melo subsp. melo OX=412675 GN=nad1 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.5e-40
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSG+SVTFQWLP
Sbjct: 301 KVFLPLSLARVVLVSGLSVTFQWLP 325

[Close]
BLAST of Cla97C03G062330 vs. Swiss-Prot
Match: sp|Q01300|NU1M_PETHY (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-40
Identity = 81/85 (95.29%), Postives = 81/85 (95.29%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           G CTSLSPGGWPPILDLPI KKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GLCTSLSPGGWPPILDLPISKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSGV VTFQWLP
Sbjct: 301 KVFLPLSLARVVPVSGVLVTFQWLP 325

[Close]
BLAST of Cla97C03G062330 vs. Swiss-Prot
Match: sp|Q01148|NU1M_WHEAT (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-35
Identity = 75/85 (88.24%), Postives = 77/85 (90.59%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           G CT L  GGW PILDLPI KKIP SIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GLCTLLFLGGWLPILDLPISKKIPCSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSGVSVTF+WLP
Sbjct: 301 KVFLPLSLARVVPVSGVSVTFRWLP 325

[Close]
BLAST of Cla97C03G062330 vs. Swiss-Prot
Match: sp|P31839|NU1M_OENBE (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-35
Identity = 75/85 (88.24%), Postives = 76/85 (89.41%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           G CT L  GGW PILDLPIFKKIPGSIWFSIKVI FLFLYIWVRAAFPRYRYDQLMGLG 
Sbjct: 247 GLCTLLFLGGWLPILDLPIFKKIPGSIWFSIKVIFFLFLYIWVRAAFPRYRYDQLMGLGW 306

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLA VV+VSGV VTFQWLP
Sbjct: 307 KVFLPLSLAWVVSVSGVLVTFQWLP 331

[Close]
BLAST of Cla97C03G062330 vs. Swiss-Prot
Match: sp|P92558|NU1M_ARATH (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE=1 SV=4)

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-34
Identity = 72/85 (84.71%), Postives = 75/85 (88.24%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           G CT    GGW PILDLPIFKKIPGSIWFSIKV+ FLFLYIWVRAAFPRYRYDQLMGLG 
Sbjct: 241 GLCTLFFLGGWLPILDLPIFKKIPGSIWFSIKVLFFLFLYIWVRAAFPRYRYDQLMGLGW 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLA VV+VSG+ VTFQWLP
Sbjct: 301 KVFLPLSLAWVVSVSGLLVTFQWLP 325

[Close]
BLAST of Cla97C03G062330 vs. Swiss-Prot
Match: sp|P26845|NU1M_MARPO (NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 PE=3 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 8.2e-31
Identity = 66/83 (79.52%), Postives = 71/83 (85.54%), Query Frame = 0 

Query: 73  CTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKV 132
           CT L  GGW PILD+PIF+ IPGSIWFSIKV+ FLF+YIWVRAAFPRYRYDQLM LG KV
Sbjct: 246 CTLLFLGGWLPILDIPIFQVIPGSIWFSIKVLFFLFVYIWVRAAFPRYRYDQLMRLGWKV 305

Query: 133 FLPLSLARVVAVSGVSVTFQWLP 156
           FLPLSLA VV VSGV V F+WLP
Sbjct: 306 FLPLSLAWVVFVSGVLVAFEWLP 328

[Close]
BLAST of Cla97C03G062330 vs. TAIR10
Match: ATMG01120.1 (NADH dehydrogenase 1B)

HSP 1 Score: 164.9 bits (416), Expect = 4.1e-41
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 301 KVFLPLSLARVVPVSGLLVTFQWLP 325

[Close]
BLAST of Cla97C03G062330 vs. TAIR10
Match: ATMG00516.1 (NADH dehydrogenase 1C)

HSP 1 Score: 164.9 bits (416), Expect = 4.1e-41
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 301 KVFLPLSLARVVPVSGLLVTFQWLP 325

[Close]
BLAST of Cla97C03G062330 vs. TAIR10
Match: ATMG01275.1 (NADH dehydrogenase 1A)

HSP 1 Score: 164.9 bits (416), Expect = 4.1e-41
Identity = 78/85 (91.76%), Postives = 80/85 (94.12%), Query Frame = 0 

Query: 71  GPCTSLSPGGWPPILDLPIFKKIPGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGR 130
           GPCT   PGGWPPILDLPIFKKIPGSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGR
Sbjct: 241 GPCTLFFPGGWPPILDLPIFKKIPGSIWFSIKVLLFLFLYIWVRAAFPRYRYDQLMGLGR 300

Query: 131 KVFLPLSLARVVAVSGVSVTFQWLP 156
           KVFLPLSLARVV VSG+ VTFQWLP
Sbjct: 301 KVFLPLSLARVVPVSGLLVTFQWLP 325

The following BLAST results are available for this feature:
BLAST of Cla97C03G062330 vs. NCBI nr
Match NameE-valueIdentityDescription
CDY45523.12.0e-4692.93BnaCnng12820D [Brassica napus][more]
YP_009306081.12.0e-4685.32NADH dehydrogenase subunit 1 (mitochondrion) [Corchorus capsularis] >AOO95919.1 ... [more]
AFY03534.14.4e-41100.00NADH dehydrogenase subunit I, partial (mitochondrion) [Lagenaria siceraria][more]
YP_009477451.12.8e-4094.38NADH dehydrogenase subunit 1 (mitochondrion) [Citrus sinensis] >AVW89066.1 NADH ... [more]
YP_004849322.13.7e-4097.65NADH dehydrogenase subunit 1 (mitochondrion) [Cucumis sativus] >ADZ10749.1 NADH ... [more]
BLAST of Cla97C03G062330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1C9I9N2|A0A1C9I9N2_COCAP1.3e-4685.32NADH-ubiquinone oxidoreductase chain 1 OS=Corchorus capsularis OX=210143 GN=nad1... [more]
tr|A0A078I8S9|A0A078I8S9_BRANA1.3e-4692.93BnaCnng12820D protein OS=Brassica napus OX=3708 GN=BnaCnng12820D PE=3 SV=1[more]
tr|K7ZCV5|K7ZCV5_LAGSI2.9e-41100.00NADH-ubiquinone oxidoreductase chain 1 (Fragment) OS=Lagenaria siceraria OX=3668... [more]
tr|A0A2R4LW59|A0A2R4LW59_CITSI1.9e-4094.38NADH-ubiquinone oxidoreductase chain 1 OS=Citrus sinensis OX=2711 GN=nad1 PE=3 S... [more]
tr|G3EU12|G3EU12_CUCME2.5e-4097.65NADH-ubiquinone oxidoreductase chain 1 OS=Cucumis melo subsp. melo OX=412675 GN=... [more]
BLAST of Cla97C03G062330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q01300|NU1M_PETHY3.3e-4095.29NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV... [more]
sp|Q01148|NU1M_WHEAT1.9e-3588.24NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 ... [more]
sp|P31839|NU1M_OENBE2.4e-3588.24NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE... [more]
sp|P92558|NU1M_ARATH2.7e-3484.71NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE... [more]
sp|P26845|NU1M_MARPO8.2e-3179.52NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 P... [more]
BLAST of Cla97C03G062330 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG01120.14.1e-4191.76NADH dehydrogenase 1B[more]
ATMG00516.14.1e-4191.76NADH dehydrogenase 1C[more]
ATMG01275.14.1e-4191.76NADH dehydrogenase 1A[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001694NADH_UbQ_OxRdtase_su1/FPO
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G062330.1Cla97C03G062330.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPFAMPF00146NADHdhcoord: 79..144
e-value: 1.0E-16
score: 61.1
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HPANTHERPTHR11432NADH DEHYDROGENASE SUBUNIT 1coord: 74..151
NoneNo IPR availablePANTHERPTHR11432:SF3NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 1coord: 74..151

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G062330Silver-seed gourdcarwmbB0561
Cla97C03G062330Silver-seed gourdcarwmbB1022
Cla97C03G062330Cucumber (Gy14) v2cgybwmbB039
Cla97C03G062330Cucumber (Gy14) v1cgywmbB609
Cla97C03G062330Cucurbita moschata (Rifu)cmowmbB057
Cla97C03G062330Cucurbita moschata (Rifu)cmowmbB099
Cla97C03G062330Wild cucumber (PI 183967)cpiwmbB040
Cla97C03G062330Cucumber (Chinese Long) v3cucwmbB038
Cla97C03G062330Cucumber (Chinese Long) v2cuwmbB040
Cla97C03G062330Bottle gourd (USVL1VR-Ls)lsiwmbB365
Cla97C03G062330Melon (DHL92) v3.6.1medwmbB231
Cla97C03G062330Melon (DHL92) v3.5.1mewmbB246
Cla97C03G062330Watermelon (Charleston Gray)wcgwmbB186
Cla97C03G062330Wax gourdwgowmbB630
Cla97C03G062330Wax gourdwgowmbB641