Cla97C03G062300 (gene) Watermelon (97103) v2

Overview
NameCla97C03G062300
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Description30S ribosomal protein S7, putative
LocationCla97Chr03 : 23179159 .. 23180272 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCTTGTGAGCGCTAAAGGTGAGGCTTTCCACATTAATGCCTCATCCTCAAATCAACTTATCCTGGTTGAACATACCATATTAATAGCCTGAGATGCATTACGCTCCAGCACATCTCTCACTTTGAGGTGTAGGTCTATGTTCATCTCCGTACCTAGCTTGACCTCTTTGTGATTGCCTAGCCTAACCTTGTTCAGGTCCCCCACAGGCTCTGCTTTCTTTTCTGTGTCCACTTTATGGACCTCCGCCCTCCTCATGCCCCTTTCGGGCAAGAGAAAAGTGTTCCGGTGGGGGCATCAATCAAGAGATCGAGGCGGATGCAAGCGATTATGCCATGTTCACTGTCTTGATGCAAAATCGAAGGTCTGTATGCGTTCATTCGAGGCTATGAAATAGGTGAAGAATTATCCTACTCCTGACAAGGAGTTGTATGCGTTGGTGCAGAGCGCGAAGAAATGGAAGCATTACGTCGATCGGAGGGGAGATCAAAAGCCTTTAGTCATCCGCTCCGTCTTGAGATATGCGGATGAAAATCAAGGGGGGCTAAACCGCCGTAAAAAAAAGGCTAGAATATAATATATGTTGAAGAGGATTGTTTACGCACAGCAGAGAAAGACTTATTCCGAAATACATAGGCAAAAGACAGATAGGCATACGGTGGGCCTCTGCTAGGCAATCGGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTTATGGTTGACGCCGTAGAGAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCGGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

mRNA sequence

ATGCCGCTTGTGAGCGCTAAAGGTCCCCCACAGGCTCTGCTTTCTTTTCTGTGTCCACTTTATGGACCTCCGCCCTCCTCATGCCCCTTTCGGGCAAGAGAAAAGTGTTCCGGTGGGGGCATCAATCAAGAGATCGAGGCGGATGCAAGCGATTATGCCATGTTCACTGTCTTGATGCAAAATCGAAGGTCTAGCGCGAAGAAATGGAAGCATTACGTCGATCGGAGGGGAGATCAAAAGCCTTTAGTCATCCGCTCCGTCTTGAGATATGCGGATGAAAATCAAGGGGGGCTAAACCGCCGCAAAAGACAGATAGGCATACGGTGGGCCTCTGCTAGGCAATCGGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTTATGGTTGACGCCGTAGAGAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCGGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

Coding sequence (CDS)

ATGCCGCTTGTGAGCGCTAAAGGTCCCCCACAGGCTCTGCTTTCTTTTCTGTGTCCACTTTATGGACCTCCGCCCTCCTCATGCCCCTTTCGGGCAAGAGAAAAGTGTTCCGGTGGGGGCATCAATCAAGAGATCGAGGCGGATGCAAGCGATTATGCCATGTTCACTGTCTTGATGCAAAATCGAAGGTCTAGCGCGAAGAAATGGAAGCATTACGTCGATCGGAGGGGAGATCAAAAGCCTTTAGTCATCCGCTCCGTCTTGAGATATGCGGATGAAAATCAAGGGGGGCTAAACCGCCGCAAAAGACAGATAGGCATACGGTGGGCCTCTGCTAGGCAATCGGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTTATGGTTGACGCCGTAGAGAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCGGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCAGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTGGATGCTTACCGAAAGAGGGGAATTGCACGTAAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

Protein sequence

MPLVSAKGPPQALLSFLCPLYGPPPSSCPFRAREKCSGGGINQEIEADASDYAMFTVLMQNRRSSAKKWKHYVDRRGDQKPLVIRSVLRYADENQGGLNRRKRQIGIRWASARQSGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKRENLHRLASTNRSFAHFRWW
Homology
[Close]
BLAST of Cla97C03G062300 vs. NCBI nr
Match: YP_009241662.1 (ribosomal protein S7 (mitochondrion) [Ziziphus jujuba] >AMP43645.1 ribosomal protein S7 (mitochondrion) [Ziziphus jujuba])

HSP 1 Score: 281.2 bits (718), Expect = 3.6e-72
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLHRLASTNRSFAHFRWW
Sbjct: 126 RKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. NCBI nr
Match: YP_009243658.1 (ribosomal protein S7 (mitochondrion) [Cannabis sativa] >ALF04068.1 ribosomal protein S7 (mitochondrion) [Cannabis sativa] >AMR97555.1 ribosomal protein S7 (mitochondrion) [Cannabis sativa] >ANC49137.1 ribosomal protein S7 (mitochondrion) [Cannabis sativa])

HSP 1 Score: 279.3 bits (713), Expect = 1.4e-71
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLHRLASTNR FAHFRWW
Sbjct: 126 RKKRENLHRLASTNRRFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. NCBI nr
Match: XP_023521058.1 (uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 4.0e-71
Identity = 140/143 (97.90%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPICEVEK
Sbjct: 43  GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEK 102

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGT+YDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 103 VGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 162

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           R+KRENLHRLASTNRSFAHFRWW
Sbjct: 163 RQKRENLHRLASTNRSFAHFRWW 185

[Close]
BLAST of Cla97C03G062300 vs. NCBI nr
Match: YP_009173837.1 (ribosomal protein S7 (mitochondrion) [Populus tremula] >YP_009178735.1 ribosomal protein S7 (mitochondrion) [Populus tremula x Populus alba] >YP_009230376.1 ribosomal protein S7 (mitochondrion) [Salix suchowensis] >YP_009230381.1 ribosomal protein S7 (mitochondrion) [Salix suchowensis] >YP_009239010.1 ribosomal protein S7 (mitochondrion) [Salix purpurea] >YP_009389177.1 ribosomal protein S7 (mitochondrion) [Populus davidiana] >XP_011043352.1 PREDICTED: ribosomal protein S7, mitochondrial [Populus euphratica] >AIW56818.1 ribosomal protein S7 (mitochondrion) [Populus trichocarpa] >ALH07316.1 ribosomal protein S7 (mitochondrion) [Populus tremula] >ALJ49772.1 ribosomal protein S7 (mitochondrion) [Populus tremula x Populus alba] >AMF83897.1 ribosomal protein S7 (mitochondrion) [Salix suchowensis] >AMF83903.1 ribosomal protein S7 (mitochondrion) [Salix suchowensis] >AMO27193.1 ribosomal protein S7 (mitochondrion) [Salix purpurea] >ARX79184.1 ribosomal protein S7 (mitochondrion) [Populus davidiana])

HSP 1 Score: 276.6 bits (706), Expect = 8.8e-71
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDA+ENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAIENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLH LASTNRSFAHFRWW
Sbjct: 126 RKKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. NCBI nr
Match: YP_003587257.1 (ribosomal protein S7 [Citrullus lanatus] >ACV96654.1 ribosomal protein S7 (mitochondrion) [Citrullus lanatus])

HSP 1 Score: 275.0 bits (702), Expect = 2.6e-70
Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAVENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLHRLASTNRSFAHFRWW
Sbjct: 126 RKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. TrEMBL
Match: tr|A0A142BZ01|A0A142BZ01_ZIZJJ (Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-72
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLHRLASTNRSFAHFRWW
Sbjct: 126 RKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. TrEMBL
Match: tr|A0A0M4R6T5|A0A0M4R6T5_CANSA (Ribosomal protein S7 OS=Cannabis sativa OX=3483 GN=rps7 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.0e-72
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLHRLASTNR FAHFRWW
Sbjct: 126 RKKRENLHRLASTNRRFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. TrEMBL
Match: tr|A0A109WWD3|A0A109WWD3_9ROSI (Ribosomal protein S7 OS=Salix suchowensis OX=1278906 GN=rps7 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.8e-71
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDA+ENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAIENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLH LASTNRSFAHFRWW
Sbjct: 126 RKKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. TrEMBL
Match: tr|A0A0N9PZZ8|A0A0N9PZZ8_POPTN (Ribosomal protein S7 OS=Populus tremula OX=113636 GN=rps7 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.8e-71
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDA+ENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAIENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLH LASTNRSFAHFRWW
Sbjct: 126 RKKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. TrEMBL
Match: tr|A0A0P0FPX8|A0A0P0FPX8_POPCN (Ribosomal protein S7 OS=Populus canescens OX=80863 GN=rps7 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.8e-71
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDA+ENIKPICEVEK
Sbjct: 6   GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAIENIKPICEVEK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RKKRENLH LASTNRSFAHFRWW
Sbjct: 126 RKKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. Swiss-Prot
Match: sp|P92557|RT07_ARATH (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.3e-70
Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAVENIKPICEV K
Sbjct: 6   GEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVAK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+KRG A
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQKRGSA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           R+KRENLH LASTNRSFAHFRWW
Sbjct: 126 RRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. Swiss-Prot
Match: sp|Q01902|RT07_WHEAT (Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.8e-67
Identity = 131/143 (91.61%), Postives = 138/143 (96.50%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQK+LIKKLVNFRM +GKRTRVRAIVY+TFHR A+TERDVIKLMVDAV+NIKPICEV K
Sbjct: 6   GEQKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPICEVVK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWIL AAFKRRISYRISLEKCSFAEILDAYRKRGI+
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYRKRGIS 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           RK+RENLH LASTNRSFAHFRWW
Sbjct: 126 RKRRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. Swiss-Prot
Match: sp|Q9MF82|RT07_BETVU (Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2)

HSP 1 Score: 252.3 bits (643), Expect = 5.8e-66
Identity = 129/142 (90.85%), Postives = 134/142 (94.37%), Query Frame = 0 

Query: 117 EQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEKV 176
           EQKQLIKKLVNF MKEGKRT+VRAIVYQTFHR A+TE DVIKLM+DAVENIKPIC+VEKV
Sbjct: 7   EQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPICKVEKV 66

Query: 177 GVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIAR 236
            VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC F EILDAYRKRGI+R
Sbjct: 67  RVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYRKRGISR 126

Query: 237 KKRENLHRLASTNRSFAHFRWW 259
           KKRENLH LAS NRSFAHFRWW
Sbjct: 127 KKRENLHGLASANRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. Swiss-Prot
Match: sp|P26867|RT07_MARPO (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=3 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 4.1e-43
Identity = 91/145 (62.76%), Postives = 121/145 (83.45%), Query Frame = 0 

Query: 115 SGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVE 174
           +G+QKQLIKKLV+  M +GK+TR RAIVY+TFHR A    DVIKL+V+A+EN+KPICEV+
Sbjct: 87  NGKQKQLIKKLVHICMIDGKKTRSRAIVYKTFHRLA-PHGDVIKLLVNAIENVKPICEVK 146

Query: 175 KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYR-ISLEKCSFAEILDAYRKRG 234
           KV ++GT   VP I+A +RQ+TLAIRW+LE+A KRR+  + ISL++C +AEIL+A +K G
Sbjct: 147 KVRISGTTRLVPSIIATNRQETLAIRWMLESAAKRRMGKKSISLDQCLYAEILEASQKMG 206

Query: 235 IARKKRENLHRLASTNRSFAHFRWW 259
           IARKKR++LH+LA  NRSF+H+RWW
Sbjct: 207 IARKKRDDLHKLAEANRSFSHYRWW 230

[Close]
BLAST of Cla97C03G062300 vs. Swiss-Prot
Match: sp|Q4FLL5|RS7_PELUB (30S ribosomal protein S7 OS=Pelagibacter ubique (strain HTCC1062) OX=335992 GN=rpsG PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.5e-21
Identity = 56/138 (40.58%), Postives = 85/138 (61.59%), Query Frame = 0 

Query: 121 LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PAQTERDVIKLMVDAVENIKPICEVEKVGVA 180
           +I KL+N  M +GK+     IVY+   +  ++T+ + I +  +A+ NIKP  EV    V 
Sbjct: 22  IIPKLINSIMYDGKKVVAEKIVYEAIEKIKSKTKEEPINVFNEAINNIKPTVEVRSRRVG 81

Query: 181 GTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARKKR 240
           G  Y VP  V   R Q LAIRW+++A+ KR+  +   +    F E+ DAY K+G A KKR
Sbjct: 82  GATYQVPVEVKTKRAQALAIRWLVDASRKRKDKH---MSDKIFNELYDAYEKKGSAVKKR 141

Query: 241 ENLHRLASTNRSFAHFRW 258
           E++H++A +N++FAHFRW
Sbjct: 142 EDVHKMAESNKAFAHFRW 156

[Close]
BLAST of Cla97C03G062300 vs. TAIR10
Match: AT2G07696.1 (Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-71
Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAVENIKPICEV K
Sbjct: 6   GEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVAK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+KRG A
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQKRGSA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           R+KRENLH LASTNRSFAHFRWW
Sbjct: 126 RRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. TAIR10
Match: ATMG01270.1 (mitochondrial ribosomal protein S7)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-71
Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0 

Query: 116 GEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPICEVEK 175
           GEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAVENIKPICEV K
Sbjct: 6   GEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPICEVAK 65

Query: 176 VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIA 235
           VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+KRG A
Sbjct: 66  VGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQKRGSA 125

Query: 236 RKKRENLHRLASTNRSFAHFRWW 259
           R+KRENLH LASTNRSFAHFRWW
Sbjct: 126 RRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of Cla97C03G062300 vs. TAIR10
Match: ATCG01240.1 (ribosomal protein S7)

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-13
Identity = 46/143 (32.17%), Postives = 82/143 (57.34%), Query Frame = 0 

Query: 118 QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVENIKPICEVEKV 177
           + +L+  LVN  +K GK++    I+Y+   +  Q TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 178 GVAGTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYRKRG 237
            V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

Query: 238 IARKKRENLHRLASTNRSFAHFR 257
            A +K+E  HR+A  NR+FAHFR
Sbjct: 139 DAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of Cla97C03G062300 vs. TAIR10
Match: ATCG00900.1 (Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-13
Identity = 46/143 (32.17%), Postives = 82/143 (57.34%), Query Frame = 0 

Query: 118 QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVENIKPICEVEKV 177
           + +L+  LVN  +K GK++    I+Y+   +  Q TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 178 GVAGTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYRKRG 237
            V G+ + VP  +   + + LAIRW+L A+ K   R +++++S      +E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

Query: 238 IARKKRENLHRLASTNRSFAHFR 257
            A +K+E  HR+A  NR+FAHFR
Sbjct: 139 DAIRKKEETHRMAEANRAFAHFR 155

The following BLAST results are available for this feature:
BLAST of Cla97C03G062300 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009241662.13.6e-72100.00ribosomal protein S7 (mitochondrion) [Ziziphus jujuba] >AMP43645.1 ribosomal pro... [more]
YP_009243658.11.4e-7199.30ribosomal protein S7 (mitochondrion) [Cannabis sativa] >ALF04068.1 ribosomal pro... [more]
XP_023521058.14.0e-7197.90uncharacterized protein LOC111784655 [Cucurbita pepo subsp. pepo][more]
YP_009173837.18.8e-7197.90ribosomal protein S7 (mitochondrion) [Populus tremula] >YP_009178735.1 ribosomal... [more]
YP_003587257.12.6e-7098.60ribosomal protein S7 [Citrullus lanatus] >ACV96654.1 ribosomal protein S7 (mitoc... [more]
BLAST of Cla97C03G062300 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A142BZ01|A0A142BZ01_ZIZJJ2.4e-72100.00Ribosomal protein S7 OS=Ziziphus jujuba OX=326968 GN=rps7 PE=4 SV=1[more]
tr|A0A0M4R6T5|A0A0M4R6T5_CANSA9.0e-7299.30Ribosomal protein S7 OS=Cannabis sativa OX=3483 GN=rps7 PE=4 SV=1[more]
tr|A0A109WWD3|A0A109WWD3_9ROSI5.8e-7197.90Ribosomal protein S7 OS=Salix suchowensis OX=1278906 GN=rps7 PE=4 SV=1[more]
tr|A0A0N9PZZ8|A0A0N9PZZ8_POPTN5.8e-7197.90Ribosomal protein S7 OS=Populus tremula OX=113636 GN=rps7 PE=4 SV=1[more]
tr|A0A0P0FPX8|A0A0P0FPX8_POPCN5.8e-7197.90Ribosomal protein S7 OS=Populus canescens OX=80863 GN=rps7 PE=4 SV=1[more]
BLAST of Cla97C03G062300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P92557|RT07_ARATH2.3e-7095.10Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS7 PE=2... [more]
sp|Q01902|RT07_WHEAT1.8e-6791.61Ribosomal protein S7, mitochondrial OS=Triticum aestivum OX=4565 GN=RPS7 PE=3 SV... [more]
sp|Q9MF82|RT07_BETVU5.8e-6690.85Ribosomal protein S7, mitochondrial OS=Beta vulgaris OX=161934 GN=RPS7 PE=2 SV=2[more]
sp|P26867|RT07_MARPO4.1e-4362.76Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS7 PE=... [more]
sp|Q4FLL5|RS7_PELUB7.5e-2140.5830S ribosomal protein S7 OS=Pelagibacter ubique (strain HTCC1062) OX=335992 GN=r... [more]
BLAST of Cla97C03G062300 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07696.11.3e-7195.10Ribosomal protein S7p/S5e family protein[more]
ATMG01270.11.3e-7195.10mitochondrial ribosomal protein S7[more]
ATCG01240.12.7e-1332.17ribosomal protein S7[more]
ATCG00900.12.7e-1332.17Ribosomal protein S7p/S5e family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005763mitochondrial small ribosomal subunit
GO:0015935small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR034643RPS7_plant
IPR000235Ribosomal_S5/S7
IPR036823Ribosomal_S7_dom_sf
IPR005717Ribosomal_S7_bac/org-type
IPR023798Ribosomal_S7_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005763 mitochondrial small ribosomal subunit
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G062300.1Cla97C03G062300.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 116..250
e-value: 9.6E-31
score: 106.3
IPR005717Ribosomal protein S7, bacterial/organellar-typeTIGRFAMTIGR01029TIGR01029coord: 113..257
e-value: 5.9E-43
score: 144.4
IPR036823Ribosomal protein S7 domain superfamilyGENE3DG3DSA:1.10.455.10coord: 99..257
e-value: 2.0E-39
score: 136.7
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILYSSF47973Ribosomal protein S7coord: 118..257
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 115..257
NoneNo IPR availablePANTHERPTHR11205:SF23RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 115..257
IPR034643Mitochondrial ribosomal protein S7, plantsCDDcd15484uS7_plantcoord: 119..258
e-value: 1.75958E-66
score: 204.537

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G062300Silver-seed gourdcarwmbB0561
Cla97C03G062300Silver-seed gourdcarwmbB1022
Cla97C03G062300Cucumber (Gy14) v2cgybwmbB039
Cla97C03G062300Cucumber (Gy14) v1cgywmbB609
Cla97C03G062300Cucurbita moschata (Rifu)cmowmbB057
Cla97C03G062300Cucurbita moschata (Rifu)cmowmbB099
Cla97C03G062300Wild cucumber (PI 183967)cpiwmbB040
Cla97C03G062300Cucumber (Chinese Long) v3cucwmbB038
Cla97C03G062300Cucumber (Chinese Long) v2cuwmbB040
Cla97C03G062300Bottle gourd (USVL1VR-Ls)lsiwmbB365
Cla97C03G062300Melon (DHL92) v3.6.1medwmbB231
Cla97C03G062300Melon (DHL92) v3.5.1mewmbB246
Cla97C03G062300Watermelon (Charleston Gray)wcgwmbB186
Cla97C03G062300Wax gourdwgowmbB630
Cla97C03G062300Wax gourdwgowmbB641