Cla97C03G062250 (gene) Watermelon (97103) v2

NameCla97C03G062250
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr03 : 23163299 .. 23165528 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAGAGGATTGTTTACGCACAGCAGAGAAAGACTTATGCTAAAATACATAGGCAAAAGACAGATAGGCATAGTGCGATGTTCAGAACACGAGAAAAAAAGAGATATCTAAAGCAGTTCCTCTTCCTGCTGCGCTTTATCGCCGCTCCGGGCTGTACTTCAAGCTTTTCCTTCAAGCAGTCTCTCAGGGTCAGGGATAGTCTCAGTACCCTTTTTGAAAAGCCTCGTTCTCTCTATTTGAGCTAGTTGCCTTTTTACAGTGGAGGTTAGAATCGCTTTCCTTCCTAAGGCTCTAGCTCTAAGAAGCTAACAATCCCCAGGGCTATTCCTAAGGGTTTCTGGGGTGTCAAAAATGGATAAAAGGACTAAGGAGAGAGGGTATACCCGATAAAGGCTAGCTTGCTTCCACTGGTGGCGGGCGAAGGGTCCAAAGGACACGTAGCCGGGGGCGAGTCAAAAAATCCAATAGTTCTCTTTTCCTTCTTGTTCATCAATCGGAAATCAAGACAAACCGGGCACTACGGTGAGACGTGAAAACACCCGATCCCATTCCGACCTCGATATGTGGAATCGTCTTGCGCCATATGTACTGAGATTGTTCGGGAGACATGGTCCAAGCCCGGTGAAGAAATAAATGCAAATTCAAAAGAGCTCGTGAGCTAATGGTGCCTGAAAGTGCCGTAACGTAAGTAACTTAGTGCTCTCCCTTTAATTTAATTGGCCGTTCTGTCATTGTCTGATCAAAAAAAAAAATGAAATGAATGTAACCGGGCTTGATCTTTCTTTTTCGTCTATTTTGTTCGATCTTCAAATCAAAGTCAGAAAAGAGCTTTCCACTTCCTTCACTTATGAAAATCTATATACTCGATCATCGAGATCGTTGGCTTCTTCGCGTCGACTTAGTTTCCAGCTTGGGCTGGTGCCTTATCCTTTCGAATTTGGAGTGTATCCGGATCGGATGACAAATCCTCGGACACACTGAAAGCTCTCTTGACTTTCCCAAACAATGCTCAGGATCTCGCTGAGGTATCTTCTCAGGTCATGATGTATTCCTTATTGATAACAGAAGGACTGAAAGTGTGCAGTGAGTGATACATCGACTTTCAAGCATCTCGTAGTTGAGCGGTACTGCCATCAACAGAAAAAACATGGACAAGGACTGCTGAACATGGATAGAACGAGAGTCGAACTCGCATGTCTCTCTTTTCCGGAAAGAAAGACAGAAAGAAACCTATCTTCCTTGACCATAAAGAACATCTTTTTACACCAATTACTGGAACATGGATCCCCTTCGACACACGATGCAGCCTTCCATTCTTTGTTCGTTCTTTTGGGATGTTATTTGATCAGGAATGGGACTGAGAGAGCTAGCCCTGATTCCGTCTTTATTGACCGAGTAGCTGGACAAAGAACAAAGGAACGAGACCTATCTCACTAATCCGGACTCGTTCGATTAATGGTGTTGCTGTCAGCCCTGTTCCTAGAGATCTGGGATGGAGGGACGCAAGAAAAGTAGGAATAGGAATGAACAGCAAATCCAATAGTTAGAGTAGGGTTAAGCATATTGCATTCTTGAAAAGTTGCTATGAGCAAATTCTTACTTGAATATTCCTCCGCTATCTCGACTTTCATCAGTGAGGAAAGGAATCTACTAGCCATACGGTGACCGGCATCTCCGGTCCCATTTCGGGACACTATTGGAGAGCACTATTGGGCGCTAGCTTTCGATGCTCTTTCATCACTTTCTGAAAAGAAGAGATGTGAATTCATCTACGATATTCTTCAAAGAGTTCAAATCTCATTCCGGCGGTAAGATTGAACCGTGACTCCTTCGTCCCGGCACACTTTCTATACTTACACGAGAGAGAGGATTTGATGGAAAGGTTTGACTTTCCTTTACTTTCTTTATCCGACCCTGGAACTAGATCTGTTGAAGGTAAGGTTTCGTCTACTAGATCAACTAAGACAGCAACAGCTTCCGTTTATGAGTGCGAGACTAAAGAGGTAATCAATAAGACCAAATTGGATCGAGATTTGTTGACCTTCGCAATAGCTACGAAATAAAGGTATAGGTGCTTTTCTTCTCCTATTCGAAGACCCTTGGCTGAAAGAGAAATCGAGGATCAAGAAAGATATAAAGAAGAGGTCTCAACTCCACTACAAGAAGATTGGTTGCTCTCTACTTCCTCATTCTCATCCCAAACCAAAAGAACAATCTAATGATTGA

mRNA sequence

ATGTTGAAGAGGATTGTTTACGCACAGCAGAGAAAGACTTATGCTAAAATACATAGGCAAAAGACAGATAGGCATAGTGCGATGTTCAGAACACGAGAAAAAAAGAGATATCTAAAGCAGTTCCTCTTCCTGCTGCGCTTTATCGCCGCTCCGGGCTACAAACCGGGCACTACGGTGAGACGTGAAAACACCCGATCCCATTCCGACCTCGATATGTGGAATCGTCTTGCGCCATATGTACTGAGATTGTTCGGGAGACATGGTCCAAGCCCGTTTCCAGCTTGGGCTGGTGCCTTATCCTTTCGAATTTGGAGTGTATCCGGATCGGATGACAAATCCTCGGACACACTGAAAGCTCTCTTGACTTTCCCAAACAATGCTCAGGATCTCGCTGAGAGTTCAAATCTCATTCCGGCGGTAAGATTGAACCGTGACTCCTTCGTCCCGGCACACTTTCTATACTTACACGAGAGAGAGGATTTGATGGAAAGGTTTGACTTTCCTTTACTTTCTTTATCCGACCCTGGAACTAGATCTGTTGAAGGTAAGGTTTCGTCTACTAGATCAACTAAGACAGCAACAGCTTCCGTTTATGAGTGCGAGACTAAAGAGCTACGAAATAAAGGTATAGGTGCTTTTCTTCTCCTATTCGAAGACCCTTGGCTGAAAGAGAAATCGAGGATCAAGAAAGATATAAAGAAGAGGTCTCAACTCCACTACAAGAAGATTGGTTGCTCTCTACTTCCTCATTCTCATCCCAAACCAAAAGAACAATCTAATGATTGA

Coding sequence (CDS)

ATGTTGAAGAGGATTGTTTACGCACAGCAGAGAAAGACTTATGCTAAAATACATAGGCAAAAGACAGATAGGCATAGTGCGATGTTCAGAACACGAGAAAAAAAGAGATATCTAAAGCAGTTCCTCTTCCTGCTGCGCTTTATCGCCGCTCCGGGCTACAAACCGGGCACTACGGTGAGACGTGAAAACACCCGATCCCATTCCGACCTCGATATGTGGAATCGTCTTGCGCCATATGTACTGAGATTGTTCGGGAGACATGGTCCAAGCCCGTTTCCAGCTTGGGCTGGTGCCTTATCCTTTCGAATTTGGAGTGTATCCGGATCGGATGACAAATCCTCGGACACACTGAAAGCTCTCTTGACTTTCCCAAACAATGCTCAGGATCTCGCTGAGAGTTCAAATCTCATTCCGGCGGTAAGATTGAACCGTGACTCCTTCGTCCCGGCACACTTTCTATACTTACACGAGAGAGAGGATTTGATGGAAAGGTTTGACTTTCCTTTACTTTCTTTATCCGACCCTGGAACTAGATCTGTTGAAGGTAAGGTTTCGTCTACTAGATCAACTAAGACAGCAACAGCTTCCGTTTATGAGTGCGAGACTAAAGAGCTACGAAATAAAGGTATAGGTGCTTTTCTTCTCCTATTCGAAGACCCTTGGCTGAAAGAGAAATCGAGGATCAAGAAAGATATAAAGAAGAGGTCTCAACTCCACTACAAGAAGATTGGTTGCTCTCTACTTCCTCATTCTCATCCCAAACCAAAAGAACAATCTAATGATTGA

Protein sequence

MLKRIVYAQQRKTYAKIHRQKTDRHSAMFRTREKKRYLKQFLFLLRFIAAPGYKPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHGPSPFPAWAGALSFRIWSVSGSDDKSSDTLKALLTFPNNAQDLAESSNLIPAVRLNRDSFVPAHFLYLHEREDLMERFDFPLLSLSDPGTRSVEGKVSSTRSTKTATASVYECETKELRNKGIGAFLLLFEDPWLKEKSRIKKDIKKRSQLHYKKIGCSLLPHSHPKPKEQSND
BLAST of Cla97C03G062250 vs. NCBI nr
Match: PPR89028.1 (hypothetical protein GOBAR_AA31648 [Gossypium barbadense])

HSP 1 Score: 78.6 bits (192), Expect = 3.6e-11
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0

Query: 54  KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRH 88
           KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRH
Sbjct: 119 KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRH 152

BLAST of Cla97C03G062250 vs. TrEMBL
Match: tr|A0A0V0HET1|A0A0V0HET1_SOLCH (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.8e-12
Identity = 36/39 (92.31%), Postives = 36/39 (92.31%), Query Frame = 0

Query: 54 KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHGPSPF 93
          KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHG   F
Sbjct: 41 KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHGARRF 79

BLAST of Cla97C03G062250 vs. TrEMBL
Match: tr|A0A2N9GHW4|A0A2N9GHW4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26892 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.8e-12
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0

Query: 54  KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHG 89
           KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHG
Sbjct: 291 KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHG 325

BLAST of Cla97C03G062250 vs. TrEMBL
Match: tr|A0A2P5WD68|A0A2P5WD68_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA31648 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-11
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0

Query: 54  KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRH 88
           KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRH
Sbjct: 119 KPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRH 152

BLAST of Cla97C03G062250 vs. TrEMBL
Match: tr|M1C468|M1C468_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.0e-11
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0

Query: 52 GYKPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHGPSP 92
          G +P  +VRRENTRSHSDLDMWNRLAPYVLRLFGRHGPSP
Sbjct: 9  GVRP--SVRRENTRSHSDLDMWNRLAPYVLRLFGRHGPSP 46

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR89028.13.6e-11100.00hypothetical protein GOBAR_AA31648 [Gossypium barbadense][more]
Match NameE-valueIdentityDescription
tr|A0A0V0HET1|A0A0V0HET1_SOLCH2.8e-1292.31Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1[more]
tr|A0A2N9GHW4|A0A2N9GHW4_FAGSY4.8e-12100.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26892 PE=4 SV=1[more]
tr|A0A2P5WD68|A0A2P5WD68_GOSBA2.4e-11100.00Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA31648 PE=4 SV... [more]
tr|M1C468|M1C468_SOLTU4.0e-1187.50Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G062250.1Cla97C03G062250.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None