Cla97C03G061580 (gene) Watermelon (97103) v2

Overview
NameCla97C03G061580
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCla97Chr03 : 19430820 .. 19431489 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTCCAAGTGCTATGACTTTCCTACTTCACGCCAAGTGTTCGACGAAATGGCTACAAAAAGTGTCATCTCTTGGAATTCTATGATTGTCGCTTATTCTATGATCATCTCGACTTTTGTAAGCTTATTGTCAGGTTTTGCTAACCCAACTCATGGATATCTCTTGCAGGGGCTTTTGGTACATGGTTGCATTACCAAATTTCAACTTCATGATGACACGCCGGTGGCAAATTCTCTTATGCAAATGTATGTAAACTTTCGTCAAATTGATTCTGCTTGCTCTATTTTTTATGCCACTAGTGACAAGACAGTAATTTCTTGGACAATAATGCTTGGTCGTTACTTGAGCTGTATTTGGTTTGTTATCTAAAAAAGCATTAATTTCAAAAATGGTTTTAATATTGTTTACAGCTTCAGAATTGGATATTGAGTTGGTTTATCAACTAATTATTTGGGAGGGTACTGTGGAAGCTCACTTGATTGGTTCAATTTGTATGAAATCTCAATTTTATCCAATTATTTGTTGGAACATTCCAGGTGACATTTATTTATTTATTTATTTTTAAATAGGATTGCAAATCAATCTGTATTTTATGGTTTCAAATGATTTTCATTACAGGGAGATTTATGGGTGGTCCAGTTACTTGTGGTATGATACGAGGACTTGA

mRNA sequence

ATGTACTCCAAGTGCTATGACTTTCCTACTTCACGCCAAGTGTTCGACGAAATGGCTACAAAAAGTGTCATCTCTTGGAATTCTATGATTGTCGCTTATTCTATGATCATCTCGACTTTTGTAAGCTTATTGTCAGGTTTTGCTAACCCAACTCATGGATATCTCTTGCAGGGGCTTTTGGTACATGGTTGCATTACCAAATTTCAACTTCATGATGACACGCCGGTGGCAAATTCTCTTATGCAAATGGAGATTTATGGGTGGTCCAGTTACTTGTGGTATGATACGAGGACTTGA

Coding sequence (CDS)

ATGTACTCCAAGTGCTATGACTTTCCTACTTCACGCCAAGTGTTCGACGAAATGGCTACAAAAAGTGTCATCTCTTGGAATTCTATGATTGTCGCTTATTCTATGATCATCTCGACTTTTGTAAGCTTATTGTCAGGTTTTGCTAACCCAACTCATGGATATCTCTTGCAGGGGCTTTTGGTACATGGTTGCATTACCAAATTTCAACTTCATGATGACACGCCGGTGGCAAATTCTCTTATGCAAATGGAGATTTATGGGTGGTCCAGTTACTTGTGGTATGATACGAGGACTTGA

Protein sequence

MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMIISTFVSLLSGFANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQMEIYGWSSYLWYDTRT
Homology
[Close]
BLAST of Cla97C03G061580 vs. NCBI nr
Match: XP_022137264.1 (pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia])

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23
Identity = 61/106 (57.55%), Postives = 71/106 (66.98%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMII---------------------ST 60
           MYSKC+D  +SRQVFDEM+ +SVISWNSMI AYS                        ST
Sbjct: 96  MYSKCFDLASSRQVFDEMSMRSVISWNSMIAAYSRAFRVNEGFKLFREMWGFGFEPNSST 155

Query: 61  FVSLLSGFANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQMEI 86
           FVSLLSGFANP HG L Q LL+ GC+TKF+L +DTPVANSLM+M +
Sbjct: 156 FVSLLSGFANPVHGSLFQCLLIQGCLTKFRLQNDTPVANSLMKMYV 201

[Close]
BLAST of Cla97C03G061580 vs. NCBI nr
Match: XP_004137641.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus] >KGN64229.1 hypothetical protein Csa_1G043310 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 7.6e-23
Identity = 62/106 (58.49%), Postives = 70/106 (66.04%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMII---------------------ST 60
           MYSK  +   SRQVFDE +T+SVISWNSMI AYS                        ST
Sbjct: 97  MYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSST 156

Query: 61  FVSLLSGFANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQMEI 86
           FVSLLSGFA+PTHG L QG L+HGC+TKFQLHDDTPV NSL+QM +
Sbjct: 157 FVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYV 202

[Close]
BLAST of Cla97C03G061580 vs. NCBI nr
Match: XP_008446053.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 9.3e-21
Identity = 60/106 (56.60%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMII---------------------ST 60
           MYSK  D   SRQVFDE +T+SVI WNSMI AYS                        ST
Sbjct: 97  MYSKISDLRASRQVFDETSTRSVIFWNSMIAAYSRGFRVNEALKLFREMLGGGFEPNSST 156

Query: 61  FVSLLSGFANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQMEI 86
           FVSLLSGFA+PTHG L QG L+HG +TKFQ HDDTPV NSL+QM +
Sbjct: 157 FVSLLSGFADPTHGSLFQGRLLHGFMTKFQFHDDTPVQNSLVQMYV 202

[Close]
BLAST of Cla97C03G061580 vs. NCBI nr
Match: XP_014495233.1 (pentatricopeptide repeat-containing protein At3g12770 [Vigna radiata var. radiata])

HSP 1 Score: 70.1 bits (170), Expect = 4.8e-09
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMI---------------------IST 60
           MYSK     ++R VFDEM  +SV+SWN+M+ AYS +                      ST
Sbjct: 94  MYSKSSHVESARLVFDEMPHRSVVSWNTMVSAYSRVSSMDQALSLLKEMWVLGFKPTAST 153

Query: 61  FVSLLSGFAN-PTHGYLLQGLLVHGCITKFQL-HDDTPVANSLMQM 84
           FVS+LSG++N  T  + LQG+ +HGC+ K  + + +  +ANSLM M
Sbjct: 154 FVSILSGYSNVDTFKFRLQGVSIHGCLIKLGIVNTEVSLANSLMAM 199

[Close]
BLAST of Cla97C03G061580 vs. NCBI nr
Match: XP_017438900.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial-like [Vigna angularis] >KOM54631.1 hypothetical protein LR48_Vigan10g052300 [Vigna angularis] >BAU02540.1 hypothetical protein VIGAN_11208900 [Vigna angularis var. angularis])

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMI---------------------IST 60
           MYSK     ++R VFDEM  ++V+SWN+M+ AYS +                      ST
Sbjct: 94  MYSKSSHVESARLVFDEMPHRTVVSWNTMVSAYSRVSSMDQALSLLKEMGVLGFKPTAST 153

Query: 61  FVSLLSGFAN-PTHGYLLQGLLVHGCITKFQL-HDDTPVANSLMQM 84
           FVS+LSG++N  T  + LQG+ +H C+ K  + H +  +ANSLM M
Sbjct: 154 FVSILSGYSNLDTFKFRLQGVSIHSCLIKLGIVHREVSLANSLMAM 199

[Close]
BLAST of Cla97C03G061580 vs. TrEMBL
Match: tr|A0A0A0LT91|A0A0A0LT91_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043310 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.0e-23
Identity = 62/106 (58.49%), Postives = 70/106 (66.04%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMII---------------------ST 60
           MYSK  +   SRQVFDE +T+SVISWNSMI AYS                        ST
Sbjct: 97  MYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSST 156

Query: 61  FVSLLSGFANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQMEI 86
           FVSLLSGFA+PTHG L QG L+HGC+TKFQLHDDTPV NSL+QM +
Sbjct: 157 FVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYV 202

[Close]
BLAST of Cla97C03G061580 vs. TrEMBL
Match: tr|A0A1S3BDP0|A0A1S3BDP0_CUCME (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488899 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.1e-21
Identity = 60/106 (56.60%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMII---------------------ST 60
           MYSK  D   SRQVFDE +T+SVI WNSMI AYS                        ST
Sbjct: 97  MYSKISDLRASRQVFDETSTRSVIFWNSMIAAYSRGFRVNEALKLFREMLGGGFEPNSST 156

Query: 61  FVSLLSGFANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQMEI 86
           FVSLLSGFA+PTHG L QG L+HG +TKFQ HDDTPV NSL+QM +
Sbjct: 157 FVSLLSGFADPTHGSLFQGRLLHGFMTKFQFHDDTPVQNSLVQMYV 202

[Close]
BLAST of Cla97C03G061580 vs. TrEMBL
Match: tr|A0A1S3TN93|A0A1S3TN93_VIGRR (pentatricopeptide repeat-containing protein At3g12770-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106757146 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-09
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMI---------------------IST 60
           MYSK     ++R VFDEM  +SV+SWN+M+ AYS +                      ST
Sbjct: 94  MYSKSSHVESARLVFDEMPHRSVVSWNTMVSAYSRVSSMDQALSLLKEMWVLGFKPTAST 153

Query: 61  FVSLLSGFAN-PTHGYLLQGLLVHGCITKFQL-HDDTPVANSLMQM 84
           FVS+LSG++N  T  + LQG+ +HGC+ K  + + +  +ANSLM M
Sbjct: 154 FVSILSGYSNVDTFKFRLQGVSIHGCLIKLGIVNTEVSLANSLMAM 199

[Close]
BLAST of Cla97C03G061580 vs. TrEMBL
Match: tr|A0A0L9VHU5|A0A0L9VHU5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g052300 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.0e-09
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMI---------------------IST 60
           MYSK     ++R VFDEM  ++V+SWN+M+ AYS +                      ST
Sbjct: 94  MYSKSSHVESARLVFDEMPHRTVVSWNTMVSAYSRVSSMDQALSLLKEMGVLGFKPTAST 153

Query: 61  FVSLLSGFAN-PTHGYLLQGLLVHGCITKFQL-HDDTPVANSLMQM 84
           FVS+LSG++N  T  + LQG+ +H C+ K  + H +  +ANSLM M
Sbjct: 154 FVSILSGYSNLDTFKFRLQGVSIHSCLIKLGIVHREVSLANSLMAM 199

[Close]
BLAST of Cla97C03G061580 vs. TrEMBL
Match: tr|A0A0S3TBU1|A0A0S3TBU1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G208900 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.0e-09
Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMI---------------------IST 60
           MYSK     ++R VFDEM  ++V+SWN+M+ AYS +                      ST
Sbjct: 94  MYSKSSHVESARLVFDEMPHRTVVSWNTMVSAYSRVSSMDQALSLLKEMGVLGFKPTAST 153

Query: 61  FVSLLSGFAN-PTHGYLLQGLLVHGCITKFQL-HDDTPVANSLMQM 84
           FVS+LSG++N  T  + LQG+ +H C+ K  + H +  +ANSLM M
Sbjct: 154 FVSILSGYSNLDTFKFRLQGVSIHSCLIKLGIVHREVSLANSLMAM 199

[Close]
BLAST of Cla97C03G061580 vs. Swiss-Prot
Match: sp|O49619|PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H27 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04
Identity = 32/104 (30.77%), Postives = 49/104 (47.12%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAY------------------SMII---ST 60
           MY +C    ++  +FD MA K+VISWNS+I AY                  S ++   +T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433

Query: 61  FVSLLSGFANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQM 84
             S+L  +A      L +G  +H  I K +   +T + NSL+ M
Sbjct: 434 IASILPAYAESLS--LSEGREIHAYIVKSRYWSNTIILNSLVHM 475

[Close]
BLAST of Cla97C03G061580 vs. Swiss-Prot
Match: sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.0e-04
Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAY 34
           MY+KC    T+RQ+FD M  ++V+SWNSMI AY
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312

[Close]
BLAST of Cla97C03G061580 vs. Swiss-Prot
Match: sp|B8YEK4|OGR1_ORYSJ (Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=OGR1 PE=2 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 9.2e-04
Identity = 30/107 (28.04%), Postives = 47/107 (43.93%), Query Frame = 0 

Query: 2   YSKCYDFPTSRQVFDEMATKSVISWNSMIVAY------SMIISTFVSLLSGF-------- 61
           Y+KC D  ++R+VFDEM  + V +WNS++         ++ ++ F  L + F        
Sbjct: 156 YAKCGDLASARKVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFHRLANSFQELPSREE 215

Query: 62  -----------ANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQM 84
                      A    G L  G+ VH    +F L  +  V NSL+ M
Sbjct: 216 PNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDRNVRVCNSLIDM 262

[Close]
BLAST of Cla97C03G061580 vs. Swiss-Prot
Match: sp|Q9C9H9|PP114_ARATH (Pentatricopeptide repeat-containing protein At1g71420 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H70 PE=2 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 9.2e-04
Identity = 30/97 (30.93%), Postives = 45/97 (46.39%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAY--------------SMIISTFVSLLSG 60
           MY+KC +   +RQVFD M  ++V+SW ++I  Y              SM+   F +  + 
Sbjct: 105 MYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTL 164

Query: 61  FANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQM 84
            +  T      G  VHG   K  LH    VAN+++ M
Sbjct: 165 SSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISM 201

[Close]
BLAST of Cla97C03G061580 vs. TAIR10
Match: AT4G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 6.0e-06
Identity = 32/104 (30.77%), Postives = 49/104 (47.12%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAY------------------SMII---ST 60
           MY +C    ++  +FD MA K+VISWNS+I AY                  S ++   +T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433

Query: 61  FVSLLSGFANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQM 84
             S+L  +A      L +G  +H  I K +   +T + NSL+ M
Sbjct: 434 IASILPAYAESLS--LSEGREIHAYIVKSRYWSNTIILNSLVHM 475

[Close]
BLAST of Cla97C03G061580 vs. TAIR10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 3.9e-05
Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAY 34
           MY+KC    T+RQ+FD M  ++V+SWNSMI AY
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312

[Close]
BLAST of Cla97C03G061580 vs. TAIR10
Match: AT1G71420.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 44.3 bits (103), Expect = 5.1e-05
Identity = 30/97 (30.93%), Postives = 45/97 (46.39%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAY--------------SMIISTFVSLLSG 60
           MY+KC +   +RQVFD M  ++V+SW ++I  Y              SM+   F +  + 
Sbjct: 105 MYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTL 164

Query: 61  FANPTHGYLLQGLLVHGCITKFQLHDDTPVANSLMQM 84
            +  T      G  VHG   K  LH    VAN+++ M
Sbjct: 165 SSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISM 201

[Close]
BLAST of Cla97C03G061580 vs. TAIR10
Match: AT3G47840.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 43.9 bits (102), Expect = 6.6e-05
Identity = 27/102 (26.47%), Postives = 47/102 (46.08%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSMI------ISTFVSLLSGFANPTH-- 60
           MY++C +      +F+ M+ + V+SW S+IVAY  I      + TF+ + +    P    
Sbjct: 253 MYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQT 312

Query: 61  -----------GYLLQGLLVHGCITKFQLHDDTPVANSLMQM 84
                        L+ G  +H  +    L+D   V+NS+M+M
Sbjct: 313 FASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354

[Close]
BLAST of Cla97C03G061580 vs. TAIR10
Match: AT2G44880.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 42.4 bits (98), Expect = 1.9e-04
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 1   MYSKCYDFPTSRQVFDEMATKSVISWNSMIVAYSM 36
           MYSKC +   ++++FDEM  K V SWN+MI  Y++
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352

The following BLAST results are available for this feature:
BLAST of Cla97C03G061580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022137264.13.4e-2357.55pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia][more]
XP_004137641.17.6e-2358.49PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativu... [more]
XP_008446053.19.3e-2156.60PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-... [more]
XP_014495233.14.8e-0939.62pentatricopeptide repeat-containing protein At3g12770 [Vigna radiata var. radiat... [more]
XP_017438900.11.1e-0838.68PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial-... [more]
BLAST of Cla97C03G061580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LT91|A0A0A0LT91_CUCSA5.0e-2358.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043310 PE=4 SV=1[more]
tr|A0A1S3BDP0|A0A1S3BDP0_CUCME6.1e-2156.60pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cuc... [more]
tr|A0A1S3TN93|A0A1S3TN93_VIGRR3.2e-0939.62pentatricopeptide repeat-containing protein At3g12770-like OS=Vigna radiata var.... [more]
tr|A0A0L9VHU5|A0A0L9VHU5_PHAAN7.0e-0938.68Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g052300 PE... [more]
tr|A0A0S3TBU1|A0A0S3TBU1_PHAAN7.0e-0938.68Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G... [more]
BLAST of Cla97C03G061580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O49619|PP350_ARATH1.1e-0430.77Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidop... [more]
sp|Q3E6Q1|PPR32_ARATH7.0e-0457.58Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
sp|B8YEK4|OGR1_ORYSJ9.2e-0428.04Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa ... [more]
sp|Q9C9H9|PP114_ARATH9.2e-0430.93Pentatricopeptide repeat-containing protein At1g71420 OS=Arabidopsis thaliana OX... [more]
BLAST of Cla97C03G061580 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35130.16.0e-0630.77Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G11290.13.9e-0557.58Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G71420.15.1e-0530.93Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G47840.16.6e-0526.47Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G44880.11.9e-0448.57Pentatricopeptide repeat (PPR-like) superfamily protein[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G061580.1Cla97C03G061580.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C03G061580ClCG03G011120Watermelon (Charleston Gray)wcgwmbB186
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G061580Wax gourdwgowmbB635
Cla97C03G061580Silver-seed gourdcarwmbB0956
Cla97C03G061580Cucumber (Gy14) v2cgybwmbB035
Cla97C03G061580Cucumber (Gy14) v1cgywmbB608
Cla97C03G061580Cucurbita maxima (Rimu)cmawmbB065
Cla97C03G061580Cucurbita maxima (Rimu)cmawmbB111
Cla97C03G061580Cucurbita moschata (Rifu)cmowmbB052
Cla97C03G061580Cucurbita moschata (Rifu)cmowmbB097
Cla97C03G061580Wild cucumber (PI 183967)cpiwmbB035
Cla97C03G061580Cucumber (Chinese Long) v3cucwmbB033
Cla97C03G061580Cucumber (Chinese Long) v2cuwmbB035
Cla97C03G061580Bottle gourd (USVL1VR-Ls)lsiwmbB362
Cla97C03G061580Bottle gourd (USVL1VR-Ls)lsiwmbB366
Cla97C03G061580Melon (DHL92) v3.6.1medwmbB229
Cla97C03G061580Melon (DHL92) v3.5.1mewmbB244
Cla97C03G061580Watermelon (97103) v1wmwmbB126
Cla97C03G061580Watermelon (97103) v1wmwmbB129