Cla97C03G054300 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G054300
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Pectinesterase
Location	Cla97Chr03 : 3526500 .. 3527730 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCTTGATCCAACAACTTCTTCCATGCATGAACTTTATTGTACCTGTTTGTAGTATGATGTTTAATGCTGCTGTATCGTTAGATGGAAGTGGAGAGTTTATAAGTATTGGTGCTGCTGTAGCAGCTGCACCGAACAACAGCAAGTCCAGATTTTACATTAATGTGAAACCTGGAATATATAGTGAACACATTGAAATTGAAAGTCATAAAACTTTCATAGCATTAATCGGTGATAATAATGCAGCCACCACTGTGATTGTTGATAATAGAACCAATGGCACTGGTTTTGGAACCTCCCAATCTGCTACTGTTGGTAAGCTTGAACTACCCACCGTTTTTTTTTTTTTTTTTTTTTTTTGCGTTTCTATGCTTTAATTTGAATCTAGTTTCTATTTGGTATAATTTGAGTTTATCTTTTTTTTTTTGTTAAAGAAAGGATACTATATTGTGTATGTGACAAAGAATACTTAATTTTCTTTTAGTCGCTAGATTTCAAAGTGTTACATTTTTATTTTGAATTTTGAATTTTGTTCCATTTTGTCTATAAATTTCAAGATTCACACTTTTATCATTAATTTTTCACTAAATATTCATATTCAATTCTTGGTGTTAATGCGTATTGATTAATTTAAAAGTATTAAATTAATTGCAATTTTAAACTAGTTTTCACTCATGCTCAACGCTATATATTAATTCAAGTTAATAAATTTAAATTTAGTGCCAAATACCAAAAATGGTGTTTAGCAAAAACCCAAGGAAAGAAATATATATATATATATATATATATATATATATATTATTTATTTTTTTTTTATTTTTTTATTTTTTTTTTTTTTGCAGTCGTGAAGGGTAACAACTTTATGGCACAATTTATAACATTTCAAAATTCTGCTGGACCTGGAAACCACCAAGCAGTTGCTCTTCTTAATGACAATAACCAAACAACATATTTCAAGTGTGTTTTTGTGGGATACCAAGACACACTTTCTATAAATGTAAAATAATTGTTGTTCAAAGATTTGTGAAATTTATGGAACGGTAGATTTCATATTTGGAAATGGTCTTGCTGTATTTCAAGATTGCAAAATATATGCACGGTTCCCAAATAACAAGACAATTATTACCATCACCGCACAATCTAAAAATTCACAAGACCAATGTAGTGGCTTCTCTTTTCAAAATTGCAGCATCATGGCCTCTCTTGAACTTGAGTCAAGAAAGGTAA

mRNA sequence

ATGGCATCCTTGATCCAACAACTTCTTCCATGCATGAACTTTATTGTACCTGTTTGTAGTATGATGTTTAATGCTGCTGTATCGTTAGATGGAAGTGGAGAGTTTATAAGTATTGGTGCTGCTGTAGCAGCTGCACCGAACAACAGCAAGTCCAGATTTTACATTAATGTGAAACCTGGAATATATAGTGAACACATTGAAATTGAAAGTCATAAAACTTTCATAGCATTAATCGGTGATAATAATGCAGCCACCACTGTGATTGTTGATAATAGAACCAATGGCACTGGTTTTGGAACCTCCCAATCTGCTACTGTTGCATCATGGCCTCTCTTGAACTTGAGTCAAGAAAGGTAA

Coding sequence (CDS)

ATGGCATCCTTGATCCAACAACTTCTTCCATGCATGAACTTTATTGTACCTGTTTGTAGTATGATGTTTAATGCTGCTGTATCGTTAGATGGAAGTGGAGAGTTTATAAGTATTGGTGCTGCTGTAGCAGCTGCACCGAACAACAGCAAGTCCAGATTTTACATTAATGTGAAACCTGGAATATATAGTGAACACATTGAAATTGAAAGTCATAAAACTTTCATAGCATTAATCGGTGATAATAATGCAGCCACCACTGTGATTGTTGATAATAGAACCAATGGCACTGGTTTTGGAACCTCCCAATCTGCTACTGTTGCATCATGGCCTCTCTTGAACTTGAGTCAAGAAAGGTAA

Protein sequence

MASLIQQLLPCMNFIVPVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDNNAATTVIVDNRTNGTGFGTSQSATVASWPLLNLSQER

Homology

[Close]

BLAST of Cla97C03G054300 vs. NCBI nr
Match: XP_022143502.1 (pectinesterase-like [Momordica charantia])

HSP 1 Score: 130.2 bits (326), Expect = 4.7e-27
Identity = 67/87 (77.01%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 21  MMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGD 80
           ++FNA VSLDGSG+F SIGAA++AAP+NS SRFYI +K G Y+EHIE+ES KTFI LIGD
Sbjct: 3   IVFNATVSLDGSGDFKSIGAAISAAPDNSNSRFYIRIKSGTYNEHIEVESQKTFITLIGD 62

Query: 81  NNAATTVIVDNRTNGTGFGTSQSATVA 108
            NAATTVIVDNR+NGTGFGTSQSAT A
Sbjct: 63  -NAATTVIVDNRSNGTGFGTSQSATFA 88

[Close]

BLAST of Cla97C03G054300 vs. NCBI nr
Match: XP_022952993.1 (probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita moschata])

HSP 1 Score: 112.5 bits (280), Expect = 1.0e-21
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 7   QLLPCM-----NFIVPVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGI 66
           QL  C+     N +  V S+ FNA VSLDGSG+F SI  A+AAAPNNS +RFYI V PGI
Sbjct: 5   QLAACLFFFFANVLALVDSIRFNAVVSLDGSGDFKSISEAIAAAPNNSNTRFYIRVTPGI 64

Query: 67  YSEHIEIESHKTFIALIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
           Y  H+EI   K FIALIGD +A TT+IVDNR++GTGF TS+SAT+
Sbjct: 65  YRGHLEIPPAKKFIALIGD-SALTTIIVDNRSHGTGFKTSESATL 108

[Close]

BLAST of Cla97C03G054300 vs. NCBI nr
Match: XP_022968878.1 (probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita maxima])

HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 7   QLLPCM-----NFIVPVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGI 66
           QL  C+     N +  V  + FNA VSLDGSG+F SI  A+AAAP+NS +RFYI+V PGI
Sbjct: 5   QLAACLFFFFVNVLALVDPIRFNAVVSLDGSGDFKSISEAIAAAPDNSNARFYIHVTPGI 64

Query: 67  YSEHIEIESHKTFIALIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
           Y  H+EI   K FIALIGD NA TT+IVDNR++GTGF TS+SATV
Sbjct: 65  YRGHLEIPPAKKFIALIGD-NALTTIIVDNRSHGTGFKTSESATV 108

[Close]

BLAST of Cla97C03G054300 vs. NCBI nr
Match: XP_023511664.1 (probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-21
Identity = 63/105 (60.00%), Postives = 76/105 (72.38%), Query Frame = 0


Query: 7   QLLPCM-----NFIVPVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGI 66
           QL+ C+     N +  V  + FNA VSLDGSG+F SI  A+AAAPNNS +RFYI V PGI
Sbjct: 5   QLVACLFFFFANVLALVDPIRFNATVSLDGSGDFKSISEAIAAAPNNSNTRFYIRVTPGI 64

Query: 67  YSEHIEIESHKTFIALIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
           Y  H+EI   K FIALIGD NA TT+IVDNR++GTGF TS+S T+
Sbjct: 65  YRGHLEIPPAKKFIALIGD-NALTTIIVDNRSHGTGFKTSESTTL 108

[Close]

BLAST of Cla97C03G054300 vs. NCBI nr
Match: XP_022952377.1 (probable pectinesterase/pectinesterase inhibitor 7 isoform X1 [Cucurbita moschata])

HSP 1 Score: 110.9 bits (276), Expect = 2.9e-21
Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 12  MNFIVPVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESH 71
           +NF+  V S  FNA V+LDG+G F SI  A+AAAPNNS +RFYI V PGIY EH+EI S 
Sbjct: 15  LNFLAVVDSTHFNATVALDGTGNFKSITDAIAAAPNNSNTRFYIRVSPGIYHEHLEIASA 74

Query: 72  KTFIALIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
           K FIALIG+N   TT+IVDNR+N  GF TS+SAT+
Sbjct: 75  KKFIALIGENE-FTTIIVDNRSNAGGFRTSESATM 108

[Close]

BLAST of Cla97C03G054300 vs. TrEMBL
Match: tr|A0A0A0LR14|A0A0A0LR14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G049450 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.4e-18
Identity = 55/103 (53.40%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 9   LPC-----MNFIVPVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYS 68
           +PC      N ++ + S+ FN  VSLDGSG F  I  A+AAAPNNS +RFYI+V PG Y 
Sbjct: 7   VPCSLFCFFNLMLLIHSLSFNLTVSLDGSGNFKRISDAIAAAPNNSNTRFYIHVAPGTYH 66

Query: 69  EHIEIESHKTFIALIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
           E ++I   K FIAL+GD +  TT+I+DNR+NGTGF T+ SAT+
Sbjct: 67  ETLQIPRLKKFIALVGD-DPFTTIIIDNRSNGTGFKTNNSATL 108

[Close]

BLAST of Cla97C03G054300 vs. TrEMBL
Match: tr|A0A0A0KNI2|A0A0A0KNI2_CUCSA (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G488760 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-18
Identity = 53/90 (58.89%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 22  MFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDN 81
           +FN  VSLDG+G F+ I  A+AAAPN S +RFYI+VKPG Y E IE+   KT IALIGD 
Sbjct: 27  IFNFTVSLDGTGNFVKINDAIAAAPNFSTTRFYIHVKPGTYKEIIEVPYEKTCIALIGD- 86

Query: 82  NAATTVIVDNRTNGTGFGTSQSATVASWPL 112
           +A+TT+IV+NR+NGTG  T+ SAT++   L
Sbjct: 87  DASTTIIVNNRSNGTGSSTASSATLSKLQL 115

[Close]

BLAST of Cla97C03G054300 vs. TrEMBL
Match: tr|A0A1U7V715|A0A1U7V715_NICSY (Pectinesterase OS=Nicotiana sylvestris OX=4096 GN=LOC104213058 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-13
Identity = 43/87 (49.43%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 20  SMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIG 79
           S  F+A V+ DGSG+F SI  A+ AAPNNS++R+ I +K GIY+E++ ++ HKT I  IG
Sbjct: 26  SSHFDAIVAADGSGDFKSITEALQAAPNNSETRYNIKIKQGIYNEYVFVDKHKTNITFIG 85

Query: 80  DNNAATTVIVDNRTNGTGFGTSQSATV 107
           D     T+I  +++NGTGF T+++ATV
Sbjct: 86  D-GVDLTIITGSKSNGTGFRTNETATV 111

[Close]

BLAST of Cla97C03G054300 vs. TrEMBL
Match: tr|W9QFB9|W9QFB9_9ROSA (Pectinesterase OS=Morus notabilis OX=981085 GN=L484_012492 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-13
Identity = 42/84 (50.00%), Postives = 59/84 (70.24%), Query Frame = 0


Query: 23  FNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDNN 82
           FN  V  D SG F ++  AV AAP NSK+R+ I +KPG Y E +EIES  T+I+LIGD +
Sbjct: 35  FNVIVQKDNSGNFTTVSDAVKAAPKNSKTRYMIRIKPGRYKERVEIESDLTYISLIGD-D 94

Query: 83  AATTVIVDNRTNGTGFGTSQSATV 107
             TT+I  +R+NG+GF T+++ T+
Sbjct: 95  VTTTIITFDRSNGSGFKTNETGTL 117

[Close]

BLAST of Cla97C03G054300 vs. TrEMBL
Match: tr|A0A1S4C9D1|A0A1S4C9D1_TOBAC (Pectinesterase OS=Nicotiana tabacum OX=4097 GN=LOC107816534 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-13
Identity = 42/87 (48.28%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 20  SMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIG 79
           S  F+A V++DGSG+F SI  A+ AAPNNSK+R+ I ++ GIY+E++ ++ HKT I  IG
Sbjct: 26  SSHFDAIVAIDGSGDFKSITEALQAAPNNSKTRYNIKIRQGIYNEYVFVDKHKTNITFIG 85

Query: 80  DNNAATTVIVDNRTNGTGFGTSQSATV 107
           D     ++I  +++NGTGF T+++ATV
Sbjct: 86  D-GVDLSIITGSKSNGTGFKTNETATV 111

[Close]

BLAST of Cla97C03G054300 vs. Swiss-Prot
Match: sp|Q42534|PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana OX=3702 GN=PME2 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 7.1e-11
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 24  NAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDNNA 83
           +A V+ DGSG+F ++ AAVAAAP  S  RF I++K G+Y E++E+   KT I  +GD   
Sbjct: 276 DATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDGR- 335

Query: 84  ATTVIVDNRTNGTGFGTSQSATVAS 109
             T+I  +R    G  T  SATVA+
Sbjct: 336 GKTIITGSRNVVDGSTTFHSATVAA 359

[Close]

BLAST of Cla97C03G054300 vs. Swiss-Prot
Match: sp|O81415|PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana OX=3702 GN=PME39 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.3e-11
Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 17  PVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIA 76
           PV    +N +V++DG+G F +I  AV AAPN S++RF I +K G Y E++E+   KT I 
Sbjct: 214 PVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIM 273

Query: 77  LIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
            IGD     TVI  NR+   G+ T Q+ TV
Sbjct: 274 FIGD-GIGKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of Cla97C03G054300 vs. Swiss-Prot
Match: sp|O81301|PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3702 GN=PME40 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-10
Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 17  PVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIA 76
           PV     N  V+ +G+G + +IG A++AAPN+S++RF I +K G Y E+IEI   KT I 
Sbjct: 200 PVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIM 259

Query: 77  LIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
            IGD     TVI  NR+   G+    SATV
Sbjct: 260 FIGD-GIGRTVIKANRSYADGWTAFHSATV 288

[Close]

BLAST of Cla97C03G054300 vs. Swiss-Prot
Match: sp|O49006|PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PME3 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-10
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 24  NAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDNNA 83
           +A V+ DGSG F ++ AAVAAAP NS  R+ I++K G+Y E++E+   K  I  +GD   
Sbjct: 281 DATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGR- 340

Query: 84  ATTVIVDNRTNGTGFGTSQSATVAS 109
             T+I  +R    G  T  SATVA+
Sbjct: 341 TRTIITGSRNVVDGSTTFHSATVAA 364

[Close]

BLAST of Cla97C03G054300 vs. Swiss-Prot
Match: sp|O48711|PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana OX=3702 GN=PME12 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.6e-10
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 27  VSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDNNAATT 86
           V+ DG+G F +I  A++ APN S  R  I VK G+Y E+I+I  +KT I LIGD  +  T
Sbjct: 240 VAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGD-GSDVT 299

Query: 87  VIVDNRTNGTGFGTSQSATVA 108
            I  NR+ G G+ T +SAT+A
Sbjct: 300 FITGNRSVGDGWTTFRSATLA 319

[Close]

BLAST of Cla97C03G054300 vs. TAIR10
Match: AT1G53830.1 (pectin methylesterase 2)

HSP 1 Score: 68.2 bits (165), Expect = 4.0e-12
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 24  NAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDNNA 83
           +A V+ DGSG+F ++ AAVAAAP  S  RF I++K G+Y E++E+   KT I  +GD   
Sbjct: 276 DATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRENVEVTKKKTNIMFLGDGR- 335

Query: 84  ATTVIVDNRTNGTGFGTSQSATVAS 109
             T+I  +R    G  T  SATVA+
Sbjct: 336 GKTIITGSRNVVDGSTTFHSATVAA 359

[Close]

BLAST of Cla97C03G054300 vs. TAIR10
Match: AT4G02300.1 (Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 67.8 bits (164), Expect = 5.2e-12
Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 17  PVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIA 76
           PV    +N +V++DG+G F +I  AV AAPN S++RF I +K G Y E++E+   KT I 
Sbjct: 214 PVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIM 273

Query: 77  LIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
            IGD     TVI  NR+   G+ T Q+ TV
Sbjct: 274 FIGD-GIGKTVIKANRSRIDGWSTFQTPTV 302

[Close]

BLAST of Cla97C03G054300 vs. TAIR10
Match: AT4G02320.1 (Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 17  PVCSMMFNAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIA 76
           PV     N  V+ +G+G + +IG A++AAPN+S++RF I +K G Y E+IEI   KT I 
Sbjct: 200 PVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIM 259

Query: 77  LIGDNNAATTVIVDNRTNGTGFGTSQSATV 107
            IGD     TVI  NR+   G+    SATV
Sbjct: 260 FIGD-GIGRTVIKANRSYADGWTAFHSATV 288

[Close]

BLAST of Cla97C03G054300 vs. TAIR10
Match: AT3G14310.1 (pectin methylesterase 3)

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-11
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 24  NAAVSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDNNA 83
           +A V+ DGSG F ++ AAVAAAP NS  R+ I++K G+Y E++E+   K  I  +GD   
Sbjct: 281 DATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGR- 340

Query: 84  ATTVIVDNRTNGTGFGTSQSATVAS 109
             T+I  +R    G  T  SATVA+
Sbjct: 341 TRTIITGSRNVVDGSTTFHSATVAA 364

[Close]

BLAST of Cla97C03G054300 vs. TAIR10
Match: AT2G26440.1 (Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 65.5 bits (158), Expect = 2.6e-11
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 27  VSLDGSGEFISIGAAVAAAPNNSKSRFYINVKPGIYSEHIEIESHKTFIALIGDNNAATT 86
           V+ DG+G F +I  A++ APN S  R  I VK G+Y E+I+I  +KT I LIGD  +  T
Sbjct: 240 VAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGD-GSDVT 299

Query: 87  VIVDNRTNGTGFGTSQSATVA 108
            I  NR+ G G+ T +SAT+A
Sbjct: 300 FITGNRSVGDGWTTFRSATLA 319

The following BLAST results are available for this feature:

BLAST of Cla97C03G054300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143502.1	4.7e-27	77.01	pectinesterase-like [Momordica charantia]	[more]
XP_022952993.1	1.0e-21	60.95	probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita moschata]	[more]
XP_022968878.1	1.3e-21	60.95	probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita maxima]	[more]
XP_023511664.1	1.7e-21	60.00	probable pectinesterase/pectinesterase inhibitor 7 [Cucurbita pepo subsp. pepo]	[more]
XP_022952377.1	2.9e-21	63.16	probable pectinesterase/pectinesterase inhibitor 7 isoform X1 [Cucurbita moschat...	[more]

BLAST of Cla97C03G054300 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LR14\|A0A0A0LR14_CUCSA	3.4e-18	53.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G049450 PE=4 SV=1	[more]
tr\|A0A0A0KNI2\|A0A0A0KNI2_CUCSA	4.5e-18	58.89	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G488760 PE=4 SV=1	[more]
tr\|A0A1U7V715\|A0A1U7V715_NICSY	3.3e-13	49.43	Pectinesterase OS=Nicotiana sylvestris OX=4096 GN=LOC104213058 PE=4 SV=1	[more]
tr\|W9QFB9\|W9QFB9_9ROSA	3.3e-13	50.00	Pectinesterase OS=Morus notabilis OX=981085 GN=L484_012492 PE=4 SV=1	[more]
tr\|A0A1S4C9D1\|A0A1S4C9D1_TOBAC	3.3e-13	48.28	Pectinesterase OS=Nicotiana tabacum OX=4097 GN=LOC107816534 PE=4 SV=1	[more]

BLAST of Cla97C03G054300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q42534\|PME2_ARATH	7.1e-11	44.71	Pectinesterase 2 OS=Arabidopsis thaliana OX=3702 GN=PME2 PE=2 SV=2	[more]
sp\|O81415\|PME39_ARATH	9.3e-11	44.44	Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana OX=3...	[more]
sp\|O81301\|PME40_ARATH	2.7e-10	44.44	Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3...	[more]
sp\|O49006\|PME3_ARATH	3.5e-10	43.53	Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PME...	[more]
sp\|O48711\|PME12_ARATH	4.6e-10	46.91	Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Cla97C03G054300 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53830.1	4.0e-12	44.71	pectin methylesterase 2	[more]
AT4G02300.1	5.2e-12	44.44	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT4G02320.1	1.5e-11	44.44	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G14310.1	2.0e-11	43.53	pectin methylesterase 3	[more]
AT2G26440.1	2.6e-11	46.91	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR000070	Pectinesterase_cat
IPR012334	Pectin_lyas_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0071555	cell wall organization
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G054300.1	Cla97C03G054300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 19..110 e-value: 5.8E-22 score: 80.3
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 25..108 e-value: 5.9E-17 score: 61.2
None	No IPR available	PANTHER	PTHR31707:SF25	PECTINESTERASE/PECTINESTERASE INHIBITOR 39-RELATED	coord: 18..107
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 18..107
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 25..109

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C03G054300	Lsi02G004450	Bottle gourd (USVL1VR-Ls)	lsiwmbB176

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C03G054300	Cucumber (Gy14) v1	cgywmbB671
Cla97C03G054300	Cucurbita maxima (Rimu)	cmawmbB068
Cla97C03G054300	Cucurbita maxima (Rimu)	cmawmbB227
Cla97C03G054300	Cucurbita moschata (Rifu)	cmowmbB055
Cla97C03G054300	Cucurbita moschata (Rifu)	cmowmbB211
Cla97C03G054300	Cucurbita moschata (Rifu)	cmowmbB394
Cla97C03G054300	Wild cucumber (PI 183967)	cpiwmbB032
Cla97C03G054300	Cucumber (Chinese Long) v3	cucwmbB030
Cla97C03G054300	Cucumber (Chinese Long) v2	cuwmbB032
Cla97C03G054300	Melon (DHL92) v3.6.1	medwmbB145
Cla97C03G054300	Melon (DHL92) v3.5.1	mewmbB156
Cla97C03G054300	Watermelon (Charleston Gray)	wcgwmbB186
Cla97C03G054300	Watermelon (Charleston Gray)	wcgwmbB262
Cla97C03G054300	Watermelon (97103) v1	wmwmbB124
Cla97C03G054300	Wax gourd	wgowmbB475
Cla97C03G054300	Watermelon (97103) v2	wmbwmbB118
Cla97C03G054300	Silver-seed gourd	carwmbB0517
Cla97C03G054300	Silver-seed gourd	carwmbB1060
Cla97C03G054300	Cucumber (Gy14) v2	cgybwmbB032
Cla97C03G054300	Cucurbita maxima (Rimu)	cmawmbB414