Cla97C02G049200 (gene) Watermelon (97103) v2

NameCla97C02G049200
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionNADH-ubiquinone/plastoquinone (Complex I) protein
LocationCla97Chr02 : 36671978 .. 36672867 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCAAGCAGTTCAAAAATTGACCCATCAGGTTTGTTTTATTTTTTCTTTGGAGTATCATCGTGGCTTATTTGGTAGGGAATTCGAAAACAAAGATTTCAATAAAAATATAATTGTGTTTCGTGTTTTCAAATATGTGTTAAGTAGCAAATTCAGAATTTAGATTCTAATTTAGACAATTGTCTTAAATGTGTTTGATACTATATTTATAAACCATAAAACTAATTGTAGTTACCAAATAAATATTAGATTGACTATAAATTATTTTTAATTAATTTATGAACATGCTTTATGTTATTTTCTTTTTTTATAATATTATATAATTGATAATACATTACAAAATACATATTTTATTAATAATTGAGTTTATAACTTGAGATAATGTAATTTAGTGGTTTTTTTTAATCTCCATTTAATATAATTGTGCAATTTAAAATTTAAAAATCAAAATCTAAACACGCTCAAAACATAAAAATATCGTTTTCAAAATTTGCATTGTTTATGTCACAGAATCTAAGAAACGTTTTCAGAAACAAAATCCAAATGGTATGTCAAACACATATTTGTTGAACTCATTAAATTTGAAAACATAAAACATGATTCGAATTTTCAACCAAACAGACACTAAGCTTTACAAATTTGTTTATATAGAGTTCGAGCCTACGATTTCAGAGTTGAAAGCTCTGCAAAGCGAGCTCGAGGAAAAGAGGAAAAAGATGGAGGAGATGAAGGAAGAGATTGAAATTACAAAAGTTTGTCTGGAGAAGAAGAAGGAGAAGAAAATTTCAAAGAAAGAAATGGAAGATTTTAAAGGGTTGTGTGAACAATACAACAGCTGGAGAAAGGAATACAATGAAACATTGGAGAAACAGACAAGGGAATCCTAG

mRNA sequence

ATGGATCCAAGCAGTTCAAAAATTGACCCATCAGAATCTAAGAAACGTTTTCAGAAACAAAATCCAAATGAGTTCGAGCCTACGATTTCAGAGTTGAAAGCTCTGCAAAGCGAGCTCGAGGAAAAGAGGAAAAAGATGGAGGAGATGAAGGAAGAGATTGAAATTACAAAAGTTTGTCTGGAGAAGAAGAAGGAGAAGAAAATTTCAAAGAAAGAAATGGAAGATTTTAAAGGGTTGTGTGAACAATACAACAGCTGGAGAAAGGAATACAATGAAACATTGGAGAAACAGACAAGGGAATCCTAG

Coding sequence (CDS)

ATGGATCCAAGCAGTTCAAAAATTGACCCATCAGAATCTAAGAAACGTTTTCAGAAACAAAATCCAAATGAGTTCGAGCCTACGATTTCAGAGTTGAAAGCTCTGCAAAGCGAGCTCGAGGAAAAGAGGAAAAAGATGGAGGAGATGAAGGAAGAGATTGAAATTACAAAAGTTTGTCTGGAGAAGAAGAAGGAGAAGAAAATTTCAAAGAAAGAAATGGAAGATTTTAAAGGGTTGTGTGAACAATACAACAGCTGGAGAAAGGAATACAATGAAACATTGGAGAAACAGACAAGGGAATCCTAG

Protein sequence

MDPSSSKIDPSESKKRFQKQNPNEFEPTISELKALQSELEEKRKKMEEMKEEIEITKVCLEKKKEKKISKKEMEDFKGLCEQYNSWRKEYNETLEKQTRES
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042773 ATP synthesis coupled electron transport
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G049200.1Cla97C02G049200.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G049200ClCG02G023100Watermelon (Charleston Gray)wcgwmbB138
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G049200Wax gourdwgowmbB353
Cla97C02G049200Wax gourdwgowmbB629
Cla97C02G049200Watermelon (97103) v2wmbwmbB093
Cla97C02G049200Silver-seed gourdcarwmbB0489
Cla97C02G049200Silver-seed gourdcarwmbB0543
Cla97C02G049200Silver-seed gourdcarwmbB0966
Cla97C02G049200Cucumber (Gy14) v2cgybwmbB029
Cla97C02G049200Cucumber (Gy14) v2cgybwmbB408
Cla97C02G049200Bottle gourd (USVL1VR-Ls)lsiwmbB361
Cla97C02G049200Cucumber (Gy14) v1cgywmbB193
Cla97C02G049200Cucurbita maxima (Rimu)cmawmbB059
Cla97C02G049200Cucurbita maxima (Rimu)cmawmbB108
Cla97C02G049200Cucurbita maxima (Rimu)cmawmbB577
Cla97C02G049200Cucurbita maxima (Rimu)cmawmbB629
Cla97C02G049200Cucurbita moschata (Rifu)cmowmbB045
Cla97C02G049200Cucurbita moschata (Rifu)cmowmbB095
Cla97C02G049200Cucurbita moschata (Rifu)cmowmbB557
Cla97C02G049200Cucurbita moschata (Rifu)cmowmbB602
Cla97C02G049200Wild cucumber (PI 183967)cpiwmbB028
Cla97C02G049200Wild cucumber (PI 183967)cpiwmbB452
Cla97C02G049200Cucumber (Chinese Long) v3cucwmbB027
Cla97C02G049200Cucumber (Chinese Long) v3cucwmbB446
Cla97C02G049200Cucumber (Chinese Long) v2cuwmbB030
Cla97C02G049200Cucumber (Chinese Long) v2cuwmbB428
Cla97C02G049200Bottle gourd (USVL1VR-Ls)lsiwmbB052
Cla97C02G049200Melon (DHL92) v3.6.1medwmbB368
Cla97C02G049200Melon (DHL92) v3.5.1mewmbB243
Cla97C02G049200Melon (DHL92) v3.5.1mewmbB377
Cla97C02G049200Watermelon (Charleston Gray)wcgwmbB181
Cla97C02G049200Watermelon (97103) v1wmwmbB119
Cla97C02G049200Watermelon (97103) v1wmwmbB316