Cla97C02G049020 (gene) Watermelon (97103) v2

Overview
NameCla97C02G049020
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionSubtilisin-like protease SBT4.4
LocationCla97Chr02 : 36539906 .. 36540193 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCTTCCATACATGTCAAAAGAGCAATCAAACTCATTTCAAGAGACAAGACCACTCGCTCAACAAATGTGACAAAGTTTACTTCCAAAGACCTCAATTACCATGCAATGGTGGCTCAAGTTTTGCTGATGCAGCAATCTGTGGTTAAGTTTCAAACAACAGTTACCAATGTAAGGGCTGCAAACTTTGCCTACAACTACAAGTTAGACTTCTTGCCATTTTCTCAAGTCACCAGAAGCTCAATACAAGAGTTGATCCTCAAGGGCTGTTGTTTTAGACATTGA

mRNA sequence

ATGTCTGCTTCCATACATGTCAAAAGAGCAATCAAACTCATTTCAAGAGACAAGACCACTCGCTCAACAAATGTGACAAAGTTTACTTCCAAAGACCTCAATTACCATGCAATGGTGGCTCAAGTTTTGCTGATGCAGCAATCTGTGGTTAAGTTTCAAACAACAGTTACCAATGTAAGGGCTGCAAACTTTGCCTACAACTACAAGTTAGACTTCTTGCCATTTTCTCAAGTCACCAGAAGCTCAATACAAGAGTTGATCCTCAAGGGCTGTTGTTTTAGACATTGA

Coding sequence (CDS)

ATGTCTGCTTCCATACATGTCAAAAGAGCAATCAAACTCATTTCAAGAGACAAGACCACTCGCTCAACAAATGTGACAAAGTTTACTTCCAAAGACCTCAATTACCATGCAATGGTGGCTCAAGTTTTGCTGATGCAGCAATCTGTGGTTAAGTTTCAAACAACAGTTACCAATGTAAGGGCTGCAAACTTTGCCTACAACTACAAGTTAGACTTCTTGCCATTTTCTCAAGTCACCAGAAGCTCAATACAAGAGTTGATCCTCAAGGGCTGTTGTTTTAGACATTGA

Protein sequence

MSASIHVKRAIKLISRDKTTRSTNVTKFTSKDLNYHAMVAQVLLMQQSVVKFQTTVTNVRAANFAYNYKLDFLPFSQVTRSSIQELILKGCCFRH
Homology
[Close]
BLAST of Cla97C02G049020 vs. NCBI nr
Match: XP_022958362.1 (subtilisin-like protease SBT4.3 [Cucurbita moschata])

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-04
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 0 

Query: 9   RAIKLISRDKTTRSTNVTKFTSKDLNYHAMVAQVLLMQQSVVKFQTTVTNVRAANFAYNY 68
           ++++ IS +K+  S   TKF+ +DLNY AMV +V  M+  VVKFQ TVTNV  AN    Y
Sbjct: 598 KSVRGISGNKSDCSRFSTKFSPQDLNYPAMVFEVPPMKPFVVKFQRTVTNVGTAN--STY 657

Query: 69  KLDFLPFSQV 79
           K +F PFS V
Sbjct: 658 KSEFSPFSIV 665

The following BLAST results are available for this feature:
BLAST of Cla97C02G049020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022958362.13.4e-0450.00subtilisin-like protease SBT4.3 [Cucurbita moschata][more]
BLAST of Cla97C02G049020 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Cla97C02G049020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G049020 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005576 extracellular region
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008236 serine-type peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G049020.1Cla97C02G049020.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.60.40.2310coord: 3..83
e-value: 7.9E-7
score: 30.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G049020Watermelon (97103) v2wmbwmbB093
Cla97C02G049020Silver-seed gourdcarwmbB0543
Cla97C02G049020Silver-seed gourdcarwmbB0966
Cla97C02G049020Cucumber (Gy14) v2cgybwmbB029
Cla97C02G049020Cucumber (Gy14) v2cgybwmbB408
Cla97C02G049020Bottle gourd (USVL1VR-Ls)lsiwmbB361
Cla97C02G049020Cucumber (Gy14) v1cgywmbB193
Cla97C02G049020Cucurbita maxima (Rimu)cmawmbB059
Cla97C02G049020Cucurbita maxima (Rimu)cmawmbB108
Cla97C02G049020Cucurbita maxima (Rimu)cmawmbB577
Cla97C02G049020Cucurbita maxima (Rimu)cmawmbB629
Cla97C02G049020Cucurbita moschata (Rifu)cmowmbB045
Cla97C02G049020Cucurbita moschata (Rifu)cmowmbB095
Cla97C02G049020Cucurbita moschata (Rifu)cmowmbB557
Cla97C02G049020Cucurbita moschata (Rifu)cmowmbB602
Cla97C02G049020Wild cucumber (PI 183967)cpiwmbB028
Cla97C02G049020Wild cucumber (PI 183967)cpiwmbB452
Cla97C02G049020Cucumber (Chinese Long) v3cucwmbB027
Cla97C02G049020Cucumber (Chinese Long) v3cucwmbB446
Cla97C02G049020Cucumber (Chinese Long) v2cuwmbB030
Cla97C02G049020Cucumber (Chinese Long) v2cuwmbB428
Cla97C02G049020Bottle gourd (USVL1VR-Ls)lsiwmbB052
Cla97C02G049020Melon (DHL92) v3.6.1medwmbB368
Cla97C02G049020Melon (DHL92) v3.5.1mewmbB243
Cla97C02G049020Melon (DHL92) v3.5.1mewmbB377
Cla97C02G049020Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G049020Watermelon (Charleston Gray)wcgwmbB181
Cla97C02G049020Watermelon (97103) v1wmwmbB316
Cla97C02G049020Wax gourdwgowmbB353
Cla97C02G049020Wax gourdwgowmbB629