Cla97C02G048850 (gene) Watermelon (97103) v2

NameCla97C02G048850
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr02 : 36388991 .. 36389715 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGAATTTTTGTTAGATATTTATTCAAATAAGGTTAAAATATCAATATCGAAGAACTTAATTTTAAGATGAAATTATAGATAAAATGTTAATTTCTACCAATATTTTTTTTAAATATTATAAAAATAAAAATTTAAATTAGTAAATAAACATTATATAATTTTATAGGATTAAATCGGTTAATAGTTCTGTTATTTATATTTTATTTTACATATTGATACTTATTTTTTGTTTTTCGTAAATTTTTTTATCATAAAAATATCGATTTATTCATCCAATGGAAACATAAAAGAAATTTAATGCTACGAAAAGAAAAGAGAGAATAAAAAATTAGAAACAAACTCTCTTCGCCTCCCCTCTTCCTGTTTTCACCTTCCCTCTCCTCCCGTTTATAGCCGCCAGTCATTCTTCTTCAGTCCGGCGATCCTCAAGCAATAGACCCACGCTACCCTCCGGCGCCAGAAGTCAACAGCGCGACTCCGACCAGAAACCGGCGCCGCACTTACACCATTGACGACAGTTTGCTCCTCGTCTACAGCAGCGACTTGTTGCAGCACACCAGACCCGCGGCGCTTGACGTCTTCTTAACCCTTGCAGACTTCGACGACGGCGCAAGACGGCGCAACATCCTCCAGCACCCAAACCACGAGCTCTACATTTGGAATTCTTCTGTTGATAGTTTCGGACTAATCGAACAAGATTTAACGGCGAAATTGGGGTAA

mRNA sequence

ATGATTGAATTTTTGTTAGATATTTATTCAAATAAGCCGCCAGTCATTCTTCTTCAGTCCGGCGATCCTCAAGCAATAGACCCACGCTACCCTCCGGCGCCAGAAGTCAACAGCGCGACTCCGACCAGAAACCGGCGCCGCACTTACACCATTGACGACAGTTTGCTCCTCGTCTACAGCAGCGACTTGTTGCAGCACACCAGACCCGCGGCGCTTGACGTCTTCTTAACCCTTGCAGACTTCGACGACGGCGCAAGACGGCGCAACATCCTCCAGCACCCAAACCACGAGCTCTACATTTGGAATTCTTCTGTTGATAGTTTCGGACTAATCGAACAAGATTTAACGGCGAAATTGGGGTAA

Coding sequence (CDS)

ATGATTGAATTTTTGTTAGATATTTATTCAAATAAGCCGCCAGTCATTCTTCTTCAGTCCGGCGATCCTCAAGCAATAGACCCACGCTACCCTCCGGCGCCAGAAGTCAACAGCGCGACTCCGACCAGAAACCGGCGCCGCACTTACACCATTGACGACAGTTTGCTCCTCGTCTACAGCAGCGACTTGTTGCAGCACACCAGACCCGCGGCGCTTGACGTCTTCTTAACCCTTGCAGACTTCGACGACGGCGCAAGACGGCGCAACATCCTCCAGCACCCAAACCACGAGCTCTACATTTGGAATTCTTCTGTTGATAGTTTCGGACTAATCGAACAAGATTTAACGGCGAAATTGGGGTAA

Protein sequence

MIEFLLDIYSNKPPVILLQSGDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAALDVFLTLADFDDGARRRNILQHPNHELYIWNSSVDSFGLIEQDLTAKLG
BLAST of Cla97C02G048850 vs. NCBI nr
Match: KGN48087.1 (hypothetical protein Csa_6G430640 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-08
Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 84  GARRRNILQHPNHELYIWNSSVDSFGLIEQDLTAKLG 121
           GARRRNIL+H NHEL+I NSSVD+FGLI+QDLTAKLG
Sbjct: 84  GARRRNILRHRNHELHILNSSVDNFGLIQQDLTAKLG 120

BLAST of Cla97C02G048850 vs. TrEMBL
Match: tr|A0A0A0KI89|A0A0A0KI89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430640 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 84  GARRRNILQHPNHELYIWNSSVDSFGLIEQDLTAKLG 121
           GARRRNIL+H NHEL+I NSSVD+FGLI+QDLTAKLG
Sbjct: 84  GARRRNILRHRNHELHILNSSVDNFGLIQQDLTAKLG 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN48087.12.2e-0883.78hypothetical protein Csa_6G430640 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
tr|A0A0A0KI89|A0A0A0KI89_CUCSA1.5e-0883.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G430640 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G048850.1Cla97C02G048850.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None