Cla97C02G047450 (gene) Watermelon (97103) v2

Overview
NameCla97C02G047450
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCla97Chr02 : 35136775 .. 35137251 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAATCAGGATTGGTGATCTCTGTTTATTTCTTAACCTTTGTGGTGAATATCCTTTGCTGGAATGGCGAGATTAAGAGAGGTAGAGAGTTGGTGGAGGAGATGATTGGGGAAGGAATTAAACCCAACATTGTTAAGGAGATGATTGGGGAAGGAATTAAACCCAACATTGTTACATTCAATGTGATGGTTAGTGCTTGCGCTAAGCGATGGAATTTGGAGGAGTTGGATCTGATATTGCTTTTGATGGAAAAGGAAGAAGTTCGTTTTGAAACCAACATGTATAAACGTTTAATTGATGGGTTCACGAGCTCAGGGAAGAATGAGAAAGCTGAGAAATTGGTGATGAAGATGCATGAGGAGGGATTGAAGGCAGATGCTCATTTGTATAATCTAATCATTAGAAGCTATTGTAAAGCAGGGACGATCAAAATGACTGAGAGAAGTATTGCTCCAAATTTTGATACATGTTGA

mRNA sequence

ATGGTGAAATCAGGATTGGTGATCTCTGTTTATTTCTTAACCTTTGTGGTGAATATCCTTTGCTGGAATGGCGAGATTAAGAGAGGTAGAGAGTTGGTGGAGGAGATGATTGGGGAAGGAATTAAACCCAACATTGTTAAGGAGATGATTGGGGAAGGAATTAAACCCAACATTGTTACATTCAATGTGATGGTTAGTGCTTGCGCTAAGCGATGGAATTTGGAGGAGTTGGATCTGATATTGCTTTTGATGGAAAAGGAAGAAGTTCGTTTTGAAACCAACATGTATAAACGTTTAATTGATGGGTTCACGAGCTCAGGGAAGAATGAGAAAGCTGAGAAATTGGTGATGAAGATGCATGAGGAGGGATTGAAGGCAGATGCTCATTTGTATAATCTAATCATTAGAAGCTATTGTAAAGCAGGGACGATCAAAATGACTGAGAGAAGTATTGCTCCAAATTTTGATACATGTTGA

Coding sequence (CDS)

ATGGTGAAATCAGGATTGGTGATCTCTGTTTATTTCTTAACCTTTGTGGTGAATATCCTTTGCTGGAATGGCGAGATTAAGAGAGGTAGAGAGTTGGTGGAGGAGATGATTGGGGAAGGAATTAAACCCAACATTGTTAAGGAGATGATTGGGGAAGGAATTAAACCCAACATTGTTACATTCAATGTGATGGTTAGTGCTTGCGCTAAGCGATGGAATTTGGAGGAGTTGGATCTGATATTGCTTTTGATGGAAAAGGAAGAAGTTCGTTTTGAAACCAACATGTATAAACGTTTAATTGATGGGTTCACGAGCTCAGGGAAGAATGAGAAAGCTGAGAAATTGGTGATGAAGATGCATGAGGAGGGATTGAAGGCAGATGCTCATTTGTATAATCTAATCATTAGAAGCTATTGTAAAGCAGGGACGATCAAAATGACTGAGAGAAGTATTGCTCCAAATTTTGATACATGTTGA

Protein sequence

MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNIVKEMIGEGIKPNIVTFNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFTSSGKNEKAEKLVMKMHEEGLKADAHLYNLIIRSYCKAGTIKMTERSIAPNFDTC
Homology
[Close]
BLAST of Cla97C02G047450 vs. NCBI nr
Match: XP_023511890.1 (pentatricopeptide repeat-containing protein At2g28050 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.9 bits (346), Expect = 3.0e-29
Identity = 72/104 (69.23%), Postives = 79/104 (75.96%), Query Frame = 0 

Query: 1   MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXX 60
           M+KS L +SVY LT VV+ILCWNGEIKRGRELVEE +G+GIKPN                
Sbjct: 204 MLKSRLEVSVYSLTVVVDILCWNGEIKRGRELVEETLGKGIKPN-------------IVT 263

Query: 61  FNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFT 105
           FNVMVSACAKRWN EELDLIL+LMEKEEVRF+ N YK LIDGFT
Sbjct: 264 FNVMVSACAKRWNFEELDLILILMEKEEVRFDANTYKLLIDGFT 294

[Close]
BLAST of Cla97C02G047450 vs. NCBI nr
Match: XP_022985570.1 (pentatricopeptide repeat-containing protein At2g28050 [Cucurbita maxima])

HSP 1 Score: 129.4 bits (324), Expect = 1.1e-26
Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 0 

Query: 1   MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXX 60
           M+KS L +SVY LT VV+ILCWNGEIKRGRELVEE +G+GIKPN                
Sbjct: 204 MLKSRLEVSVYSLTVVVDILCWNGEIKRGRELVEETLGKGIKPN-------------IVT 263

Query: 61  FNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYKRLI 101
           FNVMVSACAKRWN EELDLILLLMEKEEVRF+ N YK LI
Sbjct: 264 FNVMVSACAKRWNFEELDLILLLMEKEEVRFDANTYKLLI 290

[Close]
BLAST of Cla97C02G047450 vs. NCBI nr
Match: XP_022943381.1 (pentatricopeptide repeat-containing protein At2g28050 [Cucurbita moschata])

HSP 1 Score: 127.5 bits (319), Expect = 4.1e-26
Identity = 66/97 (68.04%), Postives = 73/97 (75.26%), Query Frame = 0 

Query: 1   MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXX 60
           M+KS L +SVY LT VV+ILCWNGEIKRGRELVEE +G+GIKPN                
Sbjct: 204 MLKSRLAVSVYSLTVVVDILCWNGEIKRGRELVEETLGKGIKPN-------------IVT 263

Query: 61  FNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYK 98
           FNVMVSACAKRWN EELDLIL+LMEKEEVRF+ N YK
Sbjct: 264 FNVMVSACAKRWNFEELDLILILMEKEEVRFDANTYK 287

[Close]
BLAST of Cla97C02G047450 vs. NCBI nr
Match: PON66544.1 (Pentatricopeptide repeat [Parasponia andersonii])

HSP 1 Score: 123.6 bits (309), Expect = 5.9e-25
Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = 0 

Query: 1   MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXX 60
           M++S + +S Y L+ VV  LC NGEI+R RELVEEM+  G +                  
Sbjct: 55  MLESNVEVSEYSLSVVVAGLCSNGEIERSRELVEEMVDRGTE-------------LSTIT 114

Query: 61  FNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFTSSGKNEKAEKLVMKMH 120
           FN M+ AC+K WN  ELDLIL LMEKE + ++ +  + LI+GFTS GK ++AE L+ +MH
Sbjct: 115 FNTMLDACSKIWNFVELDLILGLMEKEGLGYDIHTCRILINGFTSFGKVKEAESLIKEMH 174

Query: 121 EEGLKADAHLYNL---IIRSYCKAGTI--KMTERSIAPNFDT 158
           ++GLK + HLYNL   +I   C+A  +  +MTER++  N DT
Sbjct: 175 DKGLKVETHLYNLLIMLINGCCRACLMFDEMTERNVNQNADT 203

[Close]
BLAST of Cla97C02G047450 vs. NCBI nr
Match: XP_024198349.1 (pentatricopeptide repeat-containing protein At2g28050-like [Rosa chinensis] >XP_024198350.1 pentatricopeptide repeat-containing protein At2g28050-like [Rosa chinensis] >PRQ33473.1 putative pentatricopeptide [Rosa chinensis])

HSP 1 Score: 113.6 bits (283), Expect = 6.1e-22
Identity = 63/113 (55.75%), Postives = 74/113 (65.49%), Query Frame = 0 

Query: 1   MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXX 60
           ++ SG  +SVY LT VV  +C NGEI+R RELV+EM   GIKPN                
Sbjct: 206 LLYSGTGVSVYCLTAVVEGMCRNGEIRRSRELVQEMASRGIKPN-------------IIT 265

Query: 61  FNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFTSSGKNEKAE 114
           FN+MV ACAKRWN  ELDLIL LMEKE V F+   Y+ LIDGFTSSGK E+A+
Sbjct: 266 FNIMVEACAKRWNFSELDLILPLMEKEGVAFDVKTYEFLIDGFTSSGKVEEAK 305

[Close]
BLAST of Cla97C02G047450 vs. TrEMBL
Match: tr|A0A2P5CZS5|A0A2P5CZS5_PARAD (Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109660 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.9e-25
Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = 0 

Query: 1   MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXX 60
           M++S + +S Y L+ VV  LC NGEI+R RELVEEM+  G +                  
Sbjct: 55  MLESNVEVSEYSLSVVVAGLCSNGEIERSRELVEEMVDRGTE-------------LSTIT 114

Query: 61  FNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFTSSGKNEKAEKLVMKMH 120
           FN M+ AC+K WN  ELDLIL LMEKE + ++ +  + LI+GFTS GK ++AE L+ +MH
Sbjct: 115 FNTMLDACSKIWNFVELDLILGLMEKEGLGYDIHTCRILINGFTSFGKVKEAESLIKEMH 174

Query: 121 EEGLKADAHLYNL---IIRSYCKAGTI--KMTERSIAPNFDT 158
           ++GLK + HLYNL   +I   C+A  +  +MTER++  N DT
Sbjct: 175 DKGLKVETHLYNLLIMLINGCCRACLMFDEMTERNVNQNADT 203

[Close]
BLAST of Cla97C02G047450 vs. TrEMBL
Match: tr|A0A2P6QH19|A0A2P6QH19_ROSCH (Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0058011 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.0e-22
Identity = 63/113 (55.75%), Postives = 74/113 (65.49%), Query Frame = 0 

Query: 1   MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXX 60
           ++ SG  +SVY LT VV  +C NGEI+R RELV+EM   GIKPN                
Sbjct: 206 LLYSGTGVSVYCLTAVVEGMCRNGEIRRSRELVQEMASRGIKPN-------------IIT 265

Query: 61  FNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFTSSGKNEKAE 114
           FN+MV ACAKRWN  ELDLIL LMEKE V F+   Y+ LIDGFTSSGK E+A+
Sbjct: 266 FNIMVEACAKRWNFSELDLILPLMEKEGVAFDVKTYEFLIDGFTSSGKVEEAK 305

[Close]
BLAST of Cla97C02G047450 vs. TrEMBL
Match: tr|A0A2P4KY07|A0A2P4KY07_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_27292 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.6e-17
Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = 0 

Query: 16  VVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXXFNVMVSACAKRWNLE 75
           V++ LCW+GE+KRG ELVEEMIG GIKPN                FN MV+ACAKRWN E
Sbjct: 55  VLDRLCWSGEVKRGWELVEEMIGRGIKPN-------------VVTFNAMVNACAKRWNFE 114

Query: 76  ELDLILLLMEKEEVRFETNMYK 98
           EL+L+LLLMEKE V F  +MYK
Sbjct: 115 ELELVLLLMEKEGVAFSDHMYK 123

[Close]
BLAST of Cla97C02G047450 vs. TrEMBL
Match: tr|A0A2P5Y8K1|A0A2P5Y8K1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA08739 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 52/158 (32.91%), Postives = 86/158 (54.43%), Query Frame = 0 

Query: 1   MVKSGLVISVYFLTFVVNILCWNGEIKRGRELVEEMIGEGIKPNXXXXXXXXXXXXXXXX 60
           MV+SG+ I  Y +T V++ LC  GE+++GREL+ EM  +G+K N                
Sbjct: 197 MVESGVEIGAYSMTIVIDGLCRRGEVEKGRELMNEMASKGVKAN-------------VVT 256

Query: 61  FNVMVSACAKRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFTSSGKNEKAEKLVMKMH 120
           +N +++A            +L+LME+EEV +    Y  LI+ F + GK+++ EKL  +M 
Sbjct: 257 YNTILNA-----------YVLMLMEREEVEYNAATYTVLIEHFGNIGKHDEVEKLFDEMR 316

Query: 121 EEGLKADAHLY-NLIIRSYCKAGTI---KMTERSIAPN 155
           E  ++ D HLY ++I+R   K       ++TE+ + PN
Sbjct: 317 ERKVEMDVHLYTSMILRGNIKKAVSLFDELTEKGLVPN 330

[Close]
BLAST of Cla97C02G047450 vs. TrEMBL
Match: tr|D7LIG2|D7LIG2_ARALL (Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_901715 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.9e-12
Identity = 49/87 (56.32%), Postives = 55/87 (63.22%), Query Frame = 0 

Query: 1   MVKSGL-VISVYFLTFVVNILCWNGEIKRGRELVEEMI-GEGIKPNXXXXXXXXXXXXXX 60
           MV+SGL V+SVY LT VV  LC NGEI RGRELVEEM+  +GIKPN              
Sbjct: 200 MVESGLDVVSVYSLTVVVTALCCNGEITRGRELVEEMVLVKGIKPN-------------I 259

Query: 61  XXFNVMVSACAKRWNLEELDLILLLME 86
             F  M+  C KRW+ EELDLIL LME
Sbjct: 260 VTFKSMIDCCVKRWDFEELDLILKLME 273

[Close]
BLAST of Cla97C02G047450 vs. Swiss-Prot
Match: sp|Q9ZUU7|PP174_ARATH (Pentatricopeptide repeat-containing protein At2g28050 OS=Arabidopsis thaliana OX=3702 GN=At2g28050 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 0 

Query: 1   MVKSGL-VISVYFLTFVVNILCWNGEIKRGRELVEEM-IGEGIKPNXXXXXXXXXXXXXX 60
           MV+SG+ V++VY LT VV +LC NGEI R RELVEEM + +G+K N              
Sbjct: 200 MVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKAN-------------I 259

Query: 61  XXFNVMVSACAKRWNLEELDLILLLMEKE 88
             F  M+  C KRW+ EELDL+L LMEKE
Sbjct: 260 VTFKSMIGCCVKRWDFEELDLVLKLMEKE 275

[Close]
BLAST of Cla97C02G047450 vs. Swiss-Prot
Match: sp|Q9XI21|PPR44_ARATH (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04
Identity = 29/80 (36.25%), Postives = 43/80 (53.75%), Query Frame = 0 

Query: 70  KRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFTSSGKNEKAEKLVMKMHEEGLKADAH 129
           KR + +++  +LLL+EKE ++   N YK LID   SS      E++V  M  EG++ D  
Sbjct: 273 KRVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLR 332

Query: 130 LYNLIIRSYCKAGTIKMTER 150
              LI R Y  AG  +  E+
Sbjct: 333 ARALIARHYASAGLKEKAEK 352

[Close]
BLAST of Cla97C02G047450 vs. TAIR10
Match: AT2G28050.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 0 

Query: 1   MVKSGL-VISVYFLTFVVNILCWNGEIKRGRELVEEM-IGEGIKPNXXXXXXXXXXXXXX 60
           MV+SG+ V++VY LT VV +LC NGEI R RELVEEM + +G+K N              
Sbjct: 200 MVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKAN-------------I 259

Query: 61  XXFNVMVSACAKRWNLEELDLILLLMEKE 88
             F  M+  C KRW+ EELDL+L LMEKE
Sbjct: 260 VTFKSMIGCCVKRWDFEELDLVLKLMEKE 275

[Close]
BLAST of Cla97C02G047450 vs. TAIR10
Match: AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 46.2 bits (108), Expect = 2.2e-05
Identity = 29/80 (36.25%), Postives = 43/80 (53.75%), Query Frame = 0 

Query: 70  KRWNLEELDLILLLMEKEEVRFETNMYKRLIDGFTSSGKNEKAEKLVMKMHEEGLKADAH 129
           KR + +++  +LLL+EKE ++   N YK LID   SS      E++V  M  EG++ D  
Sbjct: 273 KRVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIVETMKSEGVELDLR 332

Query: 130 LYNLIIRSYCKAGTIKMTER 150
              LI R Y  AG  +  E+
Sbjct: 333 ARALIARHYASAGLKEKAEK 352

The following BLAST results are available for this feature:
BLAST of Cla97C02G047450 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023511890.13.0e-2969.23pentatricopeptide repeat-containing protein At2g28050 [Cucurbita pepo subsp. pep... [more]
XP_022985570.11.1e-2669.00pentatricopeptide repeat-containing protein At2g28050 [Cucurbita maxima][more]
XP_022943381.14.1e-2668.04pentatricopeptide repeat-containing protein At2g28050 [Cucurbita moschata][more]
PON66544.15.9e-2544.44Pentatricopeptide repeat [Parasponia andersonii][more]
XP_024198349.16.1e-2255.75pentatricopeptide repeat-containing protein At2g28050-like [Rosa chinensis] >XP_... [more]
BLAST of Cla97C02G047450 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5CZS5|A0A2P5CZS5_PARAD3.9e-2544.44Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109660 P... [more]
tr|A0A2P6QH19|A0A2P6QH19_ROSCH4.0e-2255.75Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0058011 P... [more]
tr|A0A2P4KY07|A0A2P4KY07_QUESU6.6e-1759.76Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_2... [more]
tr|A0A2P5Y8K1|A0A2P5Y8K1_GOSBA1.2e-1332.91Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA08739 PE=4 SV... [more]
tr|D7LIG2|D7LIG2_ARALL4.9e-1256.32Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata ... [more]
BLAST of Cla97C02G047450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZUU7|PP174_ARATH2.1e-1350.56Pentatricopeptide repeat-containing protein At2g28050 OS=Arabidopsis thaliana OX... [more]
sp|Q9XI21|PPR44_ARATH3.9e-0436.25Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop... [more]
BLAST of Cla97C02G047450 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28050.11.1e-1450.56Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G15480.12.2e-0536.25Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G047450.1Cla97C02G047450.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 45..71
e-value: 5.0E-5
score: 23.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 95..140
e-value: 5.7E-8
score: 32.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 95..127
e-value: 0.0014
score: 16.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 16..41
e-value: 0.029
score: 14.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 127..158
score: 5.799
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 92..126
score: 9.262
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 57..91
score: 8.111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 9.076
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 44..158
e-value: 8.6E-22
score: 80.1
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 51..158
NoneNo IPR availablePANTHERPTHR24015:SF1633SUBFAMILY NOT NAMEDcoord: 51..158

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G047450Watermelon (97103) v2wmbwmbB047
Cla97C02G047450Watermelon (97103) v2wmbwmbB098
Cla97C02G047450Silver-seed gourdcarwmbB0164
Cla97C02G047450Silver-seed gourdcarwmbB0255
Cla97C02G047450Silver-seed gourdcarwmbB0346
Cla97C02G047450Silver-seed gourdcarwmbB0966
Cla97C02G047450Cucumber (Gy14) v2cgybwmbB187
Cla97C02G047450Cucumber (Gy14) v2cgybwmbB406
Cla97C02G047450Cucumber (Gy14) v2cgybwmbB414
Cla97C02G047450Cucumber (Gy14) v1cgywmbB194
Cla97C02G047450Cucumber (Gy14) v1cgywmbB530
Cla97C02G047450Cucumber (Gy14) v1cgywmbB663
Cla97C02G047450Cucurbita maxima (Rimu)cmawmbB568
Cla97C02G047450Cucurbita maxima (Rimu)cmawmbB629
Cla97C02G047450Cucurbita maxima (Rimu)cmawmbB679
Cla97C02G047450Cucurbita maxima (Rimu)cmawmbB850
Cla97C02G047450Cucurbita maxima (Rimu)cmawmbB884
Cla97C02G047450Cucurbita moschata (Rifu)cmowmbB208
Cla97C02G047450Cucurbita moschata (Rifu)cmowmbB545
Cla97C02G047450Cucurbita moschata (Rifu)cmowmbB602
Cla97C02G047450Cucurbita moschata (Rifu)cmowmbB652
Cla97C02G047450Cucurbita moschata (Rifu)cmowmbB826
Cla97C02G047450Cucurbita moschata (Rifu)cmowmbB854
Cla97C02G047450Wild cucumber (PI 183967)cpiwmbB200
Cla97C02G047450Wild cucumber (PI 183967)cpiwmbB450
Cla97C02G047450Wild cucumber (PI 183967)cpiwmbB458
Cla97C02G047450Cucumber (Chinese Long) v3cucwmbB197
Cla97C02G047450Cucumber (Chinese Long) v3cucwmbB444
Cla97C02G047450Cucumber (Chinese Long) v3cucwmbB451
Cla97C02G047450Cucumber (Chinese Long) v2cuwmbB195
Cla97C02G047450Cucumber (Chinese Long) v2cuwmbB426
Cla97C02G047450Cucumber (Chinese Long) v2cuwmbB434
Cla97C02G047450Bottle gourd (USVL1VR-Ls)lsiwmbB052
Cla97C02G047450Bottle gourd (USVL1VR-Ls)lsiwmbB124
Cla97C02G047450Bottle gourd (USVL1VR-Ls)lsiwmbB228
Cla97C02G047450Bottle gourd (USVL1VR-Ls)lsiwmbB231
Cla97C02G047450Melon (DHL92) v3.6.1medwmbB085
Cla97C02G047450Melon (DHL92) v3.6.1medwmbB314
Cla97C02G047450Melon (DHL92) v3.6.1medwmbB520
Cla97C02G047450Melon (DHL92) v3.5.1mewmbB000
Cla97C02G047450Melon (DHL92) v3.5.1mewmbB091
Cla97C02G047450Melon (DHL92) v3.5.1mewmbB326
Cla97C02G047450Melon (DHL92) v3.5.1mewmbB528
Cla97C02G047450Watermelon (Charleston Gray)wcgwmbB043
Cla97C02G047450Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G047450Watermelon (Charleston Gray)wcgwmbB197
Cla97C02G047450Watermelon (97103) v1wmwmbB062
Cla97C02G047450Watermelon (97103) v1wmwmbB287
Cla97C02G047450Watermelon (97103) v1wmwmbB316
Cla97C02G047450Wax gourdwgowmbB031
Cla97C02G047450Wax gourdwgowmbB418
Cla97C02G047450Wax gourdwgowmbB468