Cla97C02G047080 (gene) Watermelon (97103) v2

Overview
NameCla97C02G047080
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPectinesterase 11-like protein
LocationCla97Chr02 : 34821817 .. 34822053 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCGGAAACAGCGGTGGCCGCGATTCTCGGAAGGCTGGGGCGTCATTGCTATGCGGTGTTGTGTTTGGGAGTGCTTCTTTTGACGGTGGCCCTCGTTCACTACGTCGGCGACGGAGAACCGACCGATCCTCGGGAGCGGAGCAAGCGCCGGCTTCGAGCCTTGCAGGGCCCGCCCATTCGTGGCGGAGATGGCGGCCGACTGCCGCATGCGGTGGTGAATTCAAGCGCCTAA

mRNA sequence

ATGGAGGCGGAAACAGCGGTGGCCGCGATTCTCGGAAGGCTGGGGCGTCATTGCTATGCGGTGTTGTGTTTGGGAGTGCTTCTTTTGACGGTGGCCCTCGTTCACTACGTCGGCGACGGAGAACCGACCGATCCTCGGGAGCGGAGCAAGCGCCGGCTTCGAGCCTTGCAGGGCCCGCCCATTCGTGGCGGAGATGGCGGCCGACTGCCGCATGCGGTGGTGAATTCAAGCGCCTAA

Coding sequence (CDS)

ATGGAGGCGGAAACAGCGGTGGCCGCGATTCTCGGAAGGCTGGGGCGTCATTGCTATGCGGTGTTGTGTTTGGGAGTGCTTCTTTTGACGGTGGCCCTCGTTCACTACGTCGGCGACGGAGAACCGACCGATCCTCGGGAGCGGAGCAAGCGCCGGCTTCGAGCCTTGCAGGGCCCGCCCATTCGTGGCGGAGATGGCGGCCGACTGCCGCATGCGGTGGTGAATTCAAGCGCCTAA

Protein sequence

MEAETAVAAILGRLGRHCYAVLCLGVLLLTVALVHYVGDGEPTDPRERSKRRLRALQGPPIRGGDGGRLPHAVVNSSA
Homology
[Close]
BLAST of Cla97C02G047080 vs. NCBI nr
Match: KGN47315.1 (hypothetical protein Csa_6G293180 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 4.2e-24
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 1  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVALVHYVGDGEPTDPRERSKRRLRALQGPP 60
          MEAETA+AAILGRLGRHCYAVLCLGVLLLTVA+VHYVGDGEPTDPRER+KRRLR L G  
Sbjct: 1  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSS 60

Query: 61 IRGGDGGRLPHAVVN 76
          I G D  R   AVVN
Sbjct: 61 ILGEDAARQLPAVVN 75

[Close]
BLAST of Cla97C02G047080 vs. NCBI nr
Match: XP_023512260.1 (syntaxin-71-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-21
Identity = 55/65 (84.62%), Postives = 57/65 (87.69%), Query Frame = 0 

Query: 1  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVALVHYVGDGEPTDPRERSKRRLRALQG-- 60
          ME ETAV AILGRLGRHCYAVLCLGVLLLTVA+VHYVGDGEPTDPRERSKRRLR L G  
Sbjct: 1  MEMETAVGAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERSKRRLRTLHGGR 60

Query: 61 --PPI 62
            PP+
Sbjct: 61 DPPPV 65

[Close]
BLAST of Cla97C02G047080 vs. NCBI nr
Match: ONI00617.1 (hypothetical protein PRUPE_6G098100 [Prunus persica])

HSP 1 Score: 75.9 bits (185), Expect = 6.9e-11
Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 10 ILGRLGRHCYAVLCLGVLLLTVALVHYVGDGEPTDPRERSKRRLRALQGPP 61
          +LG+LGR CYAVLCLGV++L V LV+YVG  E  DP ER++RRLRA+ GPP
Sbjct: 7  LLGKLGRQCYAVLCLGVIILAVTLVNYVGTEEQKDPMERTRRRLRAIHGPP 57

[Close]
BLAST of Cla97C02G047080 vs. NCBI nr
Match: EEF36045.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-10
Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 7  VAAILGRLGRHCYAVLCLGVLLLTVALVHYVGD--GEP-TDPRERSKRRLRALQGPPIR 63
          V  +LGRLGR CYAVLCLG++L+ V++  YVGD  GE  +DP+ER++RRLRA+ GPP+R
Sbjct: 4  VQGLLGRLGRQCYAVLCLGMILVIVSIARYVGDDGGEMISDPKERTRRRLRAIHGPPLR 62

[Close]
BLAST of Cla97C02G047080 vs. NCBI nr
Match: PQQ04906.1 (hypothetical protein Pyn_30304 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-10
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 10 ILGRLGRHCYAVLCLGVLLLTVALVHYVGDGEPTDPRERSKRRLRALQGPPIR 63
          +LG+LGR CYAVLCLGV+LL V L +YVG  E  DP ER++RRLRA+ G P+R
Sbjct: 7  LLGKLGRQCYAVLCLGVILLGVTLANYVGAEEQKDPMERTRRRLRAIHGLPLR 59

[Close]
BLAST of Cla97C02G047080 vs. TrEMBL
Match: tr|A0A0A0KC65|A0A0A0KC65_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G293180 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.8e-24
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 0 

Query: 1  MEAETAVAAILGRLGRHCYAVLCLGVLLLTVALVHYVGDGEPTDPRERSKRRLRALQGPP 60
          MEAETA+AAILGRLGRHCYAVLCLGVLLLTVA+VHYVGDGEPTDPRER+KRRLR L G  
Sbjct: 1  MEAETALAAILGRLGRHCYAVLCLGVLLLTVAVVHYVGDGEPTDPRERTKRRLRPLHGSS 60

Query: 61 IRGGDGGRLPHAVVN 76
          I G D  R   AVVN
Sbjct: 61 ILGEDAARQLPAVVN 75

[Close]
BLAST of Cla97C02G047080 vs. TrEMBL
Match: tr|A0A251NMS2|A0A251NMS2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G098100 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.6e-11
Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 10 ILGRLGRHCYAVLCLGVLLLTVALVHYVGDGEPTDPRERSKRRLRALQGPP 61
          +LG+LGR CYAVLCLGV++L V LV+YVG  E  DP ER++RRLRA+ GPP
Sbjct: 7  LLGKLGRQCYAVLCLGVIILAVTLVNYVGTEEQKDPMERTRRRLRAIHGPP 57

[Close]
BLAST of Cla97C02G047080 vs. TrEMBL
Match: tr|B9SK55|B9SK55_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1401120 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-10
Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 7  VAAILGRLGRHCYAVLCLGVLLLTVALVHYVGD--GEP-TDPRERSKRRLRALQGPPIR 63
          V  +LGRLGR CYAVLCLG++L+ V++  YVGD  GE  +DP+ER++RRLRA+ GPP+R
Sbjct: 4  VQGLLGRLGRQCYAVLCLGMILVIVSIARYVGDDGGEMISDPKERTRRRLRAIHGPPLR 62

[Close]
BLAST of Cla97C02G047080 vs. TrEMBL
Match: tr|W9RMP2|W9RMP2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_014397 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.6e-10
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 4  ETAVAAILGRLGRHCYAVLCLGVLLLTVALVHYVGDGEPTDPRERSKRRLRALQGPPIR 63
          E  +  +LG+LGR CYAVLCLGVLL++V +   V D   T+PR R+ R L ALQGPP+R
Sbjct: 2  EIVMEGLLGKLGRQCYAVLCLGVLLVSVTIARCVSDAAETEPRRRTTRSLHALQGPPLR 60

[Close]
BLAST of Cla97C02G047080 vs. TrEMBL
Match: tr|A0A061GZH7|A0A061GZH7_THECC (Pectinesterase 11-like protein OS=Theobroma cacao OX=3641 GN=TCM_041058 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.3e-09
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0 

Query: 1   MEAETAVAAILGRLGRHCYAVLCLGVLLLTVALVH--YVGDGEPTDPRERSKRRLRALQG 60
           ME    V  +LG+LGRHCYAVLC+ ++L++V + H  Y    +P D RER+KRRLR+L G
Sbjct: 312 MEMVKTVQGLLGKLGRHCYAVLCVSLILVSVTIAHMVYAMQDQPKDARERTKRRLRSLHG 371

The following BLAST results are available for this feature:
BLAST of Cla97C02G047080 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47315.14.2e-2481.33hypothetical protein Csa_6G293180 [Cucumis sativus][more]
XP_023512260.13.3e-2184.62syntaxin-71-like [Cucurbita pepo subsp. pepo][more]
ONI00617.16.9e-1166.67hypothetical protein PRUPE_6G098100 [Prunus persica][more]
EEF36045.12.6e-1061.02conserved hypothetical protein [Ricinus communis][more]
PQQ04906.14.5e-1064.15hypothetical protein Pyn_30304 [Prunus yedoensis var. nudiflora][more]
BLAST of Cla97C02G047080 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KC65|A0A0A0KC65_CUCSA2.8e-2481.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G293180 PE=4 SV=1[more]
tr|A0A251NMS2|A0A251NMS2_PRUPE4.6e-1166.67Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G098100 PE=4 SV=1[more]
tr|B9SK55|B9SK55_RICCO1.7e-1061.02Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1401120 PE=4 SV=1[more]
tr|W9RMP2|W9RMP2_9ROSA6.6e-1055.93Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_014397 PE=4 SV=1[more]
tr|A0A061GZH7|A0A061GZH7_THECC7.3e-0952.46Pectinesterase 11-like protein OS=Theobroma cacao OX=3641 GN=TCM_041058 PE=4 SV=... [more]
BLAST of Cla97C02G047080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G047080 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0008150 biological_process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0045490 pectin catabolic process
cellular_component GO:0005618 cell wall
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005784 Sec61 translocon complex
molecular_function GO:0045330 aspartyl esterase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0030599 pectinesterase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G047080.1Cla97C02G047080.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..54

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G047080Cla008752Watermelon (97103) v1wmwmbB316
Cla97C02G047080CSPI06G16360Wild cucumber (PI 183967)cpiwmbB454
Cla97C02G047080CmaCh20G004780Cucurbita maxima (Rimu)cmawmbB568
Cla97C02G047080Lsi10G012800Bottle gourd (USVL1VR-Ls)lsiwmbB052
Cla97C02G047080Carg03247Silver-seed gourdcarwmbB0346
Cla97C02G047080CsaV3_6G021760Cucumber (Chinese Long) v3cucwmbB448
Cla97C02G047080Bhi10G000460Wax gourdwgowmbB371
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G047080Watermelon (97103) v2wmbwmbB047
Cla97C02G047080Watermelon (97103) v2wmbwmbB095
Cla97C02G047080Silver-seed gourdcarwmbB0164
Cla97C02G047080Silver-seed gourdcarwmbB0222
Cla97C02G047080Silver-seed gourdcarwmbB0465
Cla97C02G047080Cucumber (Gy14) v2cgybwmbB030
Cla97C02G047080Cucumber (Gy14) v2cgybwmbB187
Cla97C02G047080Cucumber (Gy14) v2cgybwmbB410
Cla97C02G047080Cucumber (Gy14) v1cgywmbB034
Cla97C02G047080Cucumber (Gy14) v1cgywmbB530
Cla97C02G047080Cucurbita maxima (Rimu)cmawmbB223
Cla97C02G047080Cucurbita maxima (Rimu)cmawmbB459
Cla97C02G047080Cucurbita maxima (Rimu)cmawmbB614
Cla97C02G047080Cucurbita maxima (Rimu)cmawmbB850
Cla97C02G047080Cucurbita moschata (Rifu)cmowmbB206
Cla97C02G047080Cucurbita moschata (Rifu)cmowmbB236
Cla97C02G047080Cucurbita moschata (Rifu)cmowmbB441
Cla97C02G047080Cucurbita moschata (Rifu)cmowmbB545
Cla97C02G047080Cucurbita moschata (Rifu)cmowmbB588
Cla97C02G047080Cucurbita moschata (Rifu)cmowmbB826
Cla97C02G047080Wild cucumber (PI 183967)cpiwmbB029
Cla97C02G047080Wild cucumber (PI 183967)cpiwmbB200
Cla97C02G047080Cucumber (Chinese Long) v3cucwmbB028
Cla97C02G047080Cucumber (Chinese Long) v3cucwmbB197
Cla97C02G047080Cucumber (Chinese Long) v2cuwmbB028
Cla97C02G047080Cucumber (Chinese Long) v2cuwmbB195
Cla97C02G047080Cucumber (Chinese Long) v2cuwmbB430
Cla97C02G047080Bottle gourd (USVL1VR-Ls)lsiwmbB174
Cla97C02G047080Bottle gourd (USVL1VR-Ls)lsiwmbB228
Cla97C02G047080Melon (DHL92) v3.6.1medwmbB085
Cla97C02G047080Melon (DHL92) v3.6.1medwmbB140
Cla97C02G047080Melon (DHL92) v3.6.1medwmbB314
Cla97C02G047080Melon (DHL92) v3.5.1mewmbB091
Cla97C02G047080Melon (DHL92) v3.5.1mewmbB326
Cla97C02G047080Watermelon (Charleston Gray)wcgwmbB043
Cla97C02G047080Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G047080Watermelon (Charleston Gray)wcgwmbB185
Cla97C02G047080Watermelon (97103) v1wmwmbB062
Cla97C02G047080Watermelon (97103) v1wmwmbB123
Cla97C02G047080Wax gourdwgowmbB031
Cla97C02G047080Wax gourdwgowmbB469