Cla97C02G044790 (gene) Watermelon (97103) v2

Overview
NameCla97C02G044790
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCla97Chr02 : 32952949 .. 32953939 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTCCGACCAGATTTTCTTCGACCCATAATCGCCTATGTAGTCCCAAAACCTCCATGGTTCCATTTATTTCATTCGCCCACTGACCCAATCGCCACTTCCAATGAGGTCTCCACCATAATCGAAACTATTGATCCTTTCGAAGATGGATTGGAAGTCATATCGCCCCATATTTCGTCTGATGTAATTACCTCCGTCATTGAAGATCAATCGAATCCCCGACTTGGATTTCGACTTTTTATCTGGTCGTTAAGGAGAAAGAGTCTCTGCTGCAATGCCTCGCAGAATTTTATCATCGACAGGTTAGTAAAGGACAATGCCTTCGAATTATATTGGAAAACTCTTCAAGAGCTTAAGGATTCAGCAATTGAAATTCCATCGGATGCTTTCTCTGTGTTGATTGAGGCATACTCAAAAGCGGGCATGGATGAGAAGGCCGTTGAATCATTTGGTCTGATGCGGGATTTTGACTGTAAGCCCAACATTTTTGCTTTCAATTTGATTTTGCATGTTTTGGTGCGAAAAGAAGCATTTTTGTTAGCTTTAGCAGTGTATAATCAGATGCTGAAATGTAATTTGAATCCGAATGTGGTTACCTACAGCATATTGATTCATGGATTCTGTAAATCTAGTAAAACTCAAGATGCCCTTGTACTTTTTGATGAAATGACCTATAGAGGAATATTGCCCAACGAGATAACTTATTCGATTGTTCTTTCTGGACTGTGTCAAGCTAAGAAAATTGATGATGCCCAGAGATTGTTCAGTAAGATGAGAGCGATTGGGTGTAGTCCAGATGTAATAACTTATAATGTTTTGCTTAATGGATTTTGTAAGTTAGGTTATTTGGATGAAGCTTTTTCATTGTTGCAATCATTTGAAAAGGATGGCCATATTCTTGGAGTTAATGGGTATAGTTGTTTGATTAATGGCTTGTTTAGGGCTAGGAGATATGACGAAGCACATATGTGGTACCAGAAAATGTTGA

mRNA sequence

ATGAAGCTCCGACCAGATTTTCTTCGACCCATAATCGCCTATGTAGTCCCAAAACCTCCATGGTTCCATTTATTTCATTCGCCCACTGACCCAATCGCCACTTCCAATGAGGTCTCCACCATAATCGAAACTATTGATCCTTTCGAAGATGGATTGGAAGTCATATCGCCCCATATTTCGTCTGATGTAATTACCTCCGTCATTGAAGATCAATCGAATCCCCGACTTGGATTTCGACTTTTTATCTGGTCGTTAAGGAGAAAGAGTCTCTGCTGCAATGCCTCGCAGAATTTTATCATCGACAGGTTAGTAAAGGACAATGCCTTCGAATTATATTGGAAAACTCTTCAAGAGCTTAAGGATTCAGCAATTGAAATTCCATCGGATGCTTTCTCTGTGTTGATTGAGGCATACTCAAAAGCGGGCATGGATGAGAAGGCCGTTGAATCATTTGGTCTGATGCGGGATTTTGACTGGCTAGGAGATATGACGAAGCACATATGTGGTACCAGAAAATGTTGA

Coding sequence (CDS)

ATGAAGCTCCGACCAGATTTTCTTCGACCCATAATCGCCTATGTAGTCCCAAAACCTCCATGGTTCCATTTATTTCATTCGCCCACTGACCCAATCGCCACTTCCAATGAGGTCTCCACCATAATCGAAACTATTGATCCTTTCGAAGATGGATTGGAAGTCATATCGCCCCATATTTCGTCTGATGTAATTACCTCCGTCATTGAAGATCAATCGAATCCCCGACTTGGATTTCGACTTTTTATCTGGTCGTTAAGGAGAAAGAGTCTCTGCTGCAATGCCTCGCAGAATTTTATCATCGACAGGTTAGTAAAGGACAATGCCTTCGAATTATATTGGAAAACTCTTCAAGAGCTTAAGGATTCAGCAATTGAAATTCCATCGGATGCTTTCTCTGTGTTGATTGAGGCATACTCAAAAGCGGGCATGGATGAGAAGGCCGTTGAATCATTTGGTCTGATGCGGGATTTTGACTGGCTAGGAGATATGACGAAGCACATATGTGGTACCAGAAAATGTTGA

Protein sequence

MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHISSDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELKDSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFDWLGDMTKHICGTRKC
Homology
[Close]
BLAST of Cla97C02G044790 vs. NCBI nr
Match: XP_023007126.1 (pentatricopeptide repeat-containing protein At1g79540 [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 128/158 (81.01%), Postives = 145/158 (91.77%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           MK R  FLRP++ Y+VPKPPWFHLFH+PTDPIATSNEVSTIIET+DP ED LE I+PHIS
Sbjct: 1   MKRRSTFLRPVVTYLVPKPPWFHLFHTPTDPIATSNEVSTIIETVDPIEDALETIAPHIS 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELK 120
           SDVITSVI++Q N RLGFRLFIWSLRR+ LCC+ASQ+ IIDRLVKDNAFELYWKTLQELK
Sbjct: 61  SDVITSVIQEQPNARLGFRLFIWSLRRRHLCCSASQDLIIDRLVKDNAFELYWKTLQELK 120

Query: 121 DSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFD 159
           DS+ EI SDAFSVLIEAYSKAGM+EKAV+SFG+M+DF+
Sbjct: 121 DSSTEISSDAFSVLIEAYSKAGMEEKAVQSFGMMKDFE 158

[Close]
BLAST of Cla97C02G044790 vs. NCBI nr
Match: XP_022149645.1 (pentatricopeptide repeat-containing protein At1g79540 isoform X1 [Momordica charantia])

HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69
Identity = 129/158 (81.65%), Postives = 143/158 (90.51%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           MK RP F+RPII  +VPKPPWFHL+HSPTDPIATSNEV TI+ET++PFED LE I+PH+S
Sbjct: 1   MKRRPTFIRPIIINLVPKPPWFHLYHSPTDPIATSNEVFTIVETVNPFEDALEPIAPHMS 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELK 120
            DVITSVIE+Q NPRLGFRLFIWSL+ K LCC+ASQN IIDRLV+DNAFELYWKTLQELK
Sbjct: 61  PDVITSVIEEQPNPRLGFRLFIWSLKNKRLCCSASQNLIIDRLVRDNAFELYWKTLQELK 120

Query: 121 DSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFD 159
           DSA+ I SDAFSVLIEAYS AGMDEKAVESFGLM+DFD
Sbjct: 121 DSAVTIHSDAFSVLIEAYSNAGMDEKAVESFGLMKDFD 158

[Close]
BLAST of Cla97C02G044790 vs. NCBI nr
Match: XP_022948073.1 (pentatricopeptide repeat-containing protein At1g79540 [Cucurbita moschata])

HSP 1 Score: 270.0 bits (689), Expect = 5.5e-69
Identity = 127/158 (80.38%), Postives = 144/158 (91.14%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           MK R  FLRP++ Y+VPKPPWFHLFH+ TDPIATSNEVSTIIET+DP ED LE+I+PH+S
Sbjct: 1   MKRRSTFLRPVVTYLVPKPPWFHLFHTSTDPIATSNEVSTIIETVDPIEDALEIIAPHLS 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELK 120
           SDVITSVI++Q N RLGFRLFIWSLRR+ LCC+ASQN IIDRLVKDNAFELYWKTLQELK
Sbjct: 61  SDVITSVIQEQPNARLGFRLFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELK 120

Query: 121 DSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFD 159
           DS+ EI SDAFSVLIEAYSKAGM EKAV+SFG+M+DF+
Sbjct: 121 DSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFE 158

[Close]
BLAST of Cla97C02G044790 vs. NCBI nr
Match: XP_023534570.1 (pentatricopeptide repeat-containing protein At1g79540 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.0 bits (689), Expect = 5.5e-69
Identity = 127/158 (80.38%), Postives = 144/158 (91.14%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           MK R  FLRP++ Y+VPKPPWFHLFH+PTD IATSNEVSTIIET+DP ED LE+I+PHIS
Sbjct: 1   MKRRSTFLRPVVTYLVPKPPWFHLFHTPTDSIATSNEVSTIIETVDPIEDALEIIAPHIS 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELK 120
           SDVITSVI++Q N RLGFR+FIWSLRR+ LCC+ASQN IIDRLVKDNAFELYWKTLQELK
Sbjct: 61  SDVITSVIQEQPNARLGFRIFIWSLRRRHLCCSASQNLIIDRLVKDNAFELYWKTLQELK 120

Query: 121 DSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFD 159
           DS+ EI SDAFSVLIEAYSKAGM EKAV+SFG+M+DF+
Sbjct: 121 DSSTEISSDAFSVLIEAYSKAGMAEKAVQSFGMMKDFE 158

[Close]
BLAST of Cla97C02G044790 vs. NCBI nr
Match: XP_004140023.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g79540 [Cucumis sativus] >XP_011656969.1 PREDICTED: pentatricopeptide repeat-containing protein At1g79540 [Cucumis sativus] >KGN46779.1 hypothetical protein Csa_6G134370 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 1.3e-54
Identity = 113/163 (69.33%), Postives = 132/163 (80.98%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           MKLRP   RPII +VVPKP  FH +HS T+PIATS EVSTIIET+DP EDGL+VIS  I 
Sbjct: 1   MKLRPILFRPIIIHVVPKPTLFHSYHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIR 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELK 120
           S  ITSV+++Q + RLGFRLFIWSL+   L C   Q+ II +L+K+NAFELYWK LQELK
Sbjct: 61  SYTITSVLQEQPDTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELK 120

Query: 121 DSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFDWLGDM 164
           +SAI+I S+AFSVLIEAYS+AGMDEKAVESFGLMRDFD   D+
Sbjct: 121 NSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDL 163

[Close]
BLAST of Cla97C02G044790 vs. TrEMBL
Match: tr|A0A0A0KD52|A0A0A0KD52_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G134370 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.8e-55
Identity = 113/163 (69.33%), Postives = 132/163 (80.98%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           MKLRP   RPII +VVPKP  FH +HS T+PIATS EVSTIIET+DP EDGL+VIS  I 
Sbjct: 1   MKLRPILFRPIIIHVVPKPTLFHSYHSRTNPIATSIEVSTIIETLDPMEDGLKVISSRIR 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELK 120
           S  ITSV+++Q + RLGFRLFIWSL+   L C   Q+ II +L+K+NAFELYWK LQELK
Sbjct: 61  SYTITSVLQEQPDTRLGFRLFIWSLKSWHLRCRTVQDLIIGKLIKENAFELYWKVLQELK 120

Query: 121 DSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFDWLGDM 164
           +SAI+I S+AFSVLIEAYS+AGMDEKAVESFGLMRDFD   D+
Sbjct: 121 NSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDL 163

[Close]
BLAST of Cla97C02G044790 vs. TrEMBL
Match: tr|A0A1S3C3I5|A0A1S3C3I5_CUCME (pentatricopeptide repeat-containing protein At1g79540 OS=Cucumis melo OX=3656 GN=LOC103496265 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 112/158 (70.89%), Postives = 128/158 (81.01%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           MKLRP+  RPII +VVPKPP F  +HS T+PI TS EVSTIIET+DP EDGL+VIS  I+
Sbjct: 1   MKLRPNLFRPIIIHVVPKPPLFQSYHSRTNPIGTSIEVSTIIETVDPMEDGLKVISSRIT 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELK 120
           S +ITSV+  Q N  LGFRLFIWSL        A ++ IID+L+KDNAFELYWK LQELK
Sbjct: 61  SYIITSVLRKQPNTLLGFRLFIWSLESSHFRWRALKHLIIDKLIKDNAFELYWKVLQELK 120

Query: 121 DSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFD 159
           +SAIEI SDAFSVLIEAYS+AGM+EKAVESFGLMRDFD
Sbjct: 121 ESAIEISSDAFSVLIEAYSEAGMEEKAVESFGLMRDFD 158

[Close]
BLAST of Cla97C02G044790 vs. TrEMBL
Match: tr|A0A251PJN8|A0A251PJN8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G124200 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 80/158 (50.63%), Postives = 113/158 (71.52%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           M L P  LRP I+Y  PKPPW   F++ ++   T+NEV TI+ET++  E  LE + P +S
Sbjct: 1   MNLLPPMLRP-ISYFTPKPPWRRCFNTCSEATVTANEVLTILETVNHMESALEPVVPKLS 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELK 120
           S++++ VI +Q+NPRL FR FIW+ +R  LC   SQ+ +ID LV+D+AFELYW+TL++L+
Sbjct: 61  SEIVSYVIREQTNPRLVFRFFIWATKRMRLCSRMSQSSVIDMLVRDDAFELYWRTLEQLR 120

Query: 121 DSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFD 159
           D  + I S AF+VLI  Y+K  M EKAVE+FG M+DF+
Sbjct: 121 DCGLPIGSAAFAVLINGYAKLDMAEKAVETFGRMKDFN 157

[Close]
BLAST of Cla97C02G044790 vs. TrEMBL
Match: tr|A0A2P5API2|A0A2P5API2_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_345350 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.7e-37
Identity = 78/160 (48.75%), Postives = 108/160 (67.50%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           M   P   R +      KPPWFH FHS +   ATSNE+ TI+ET+DP E  L+   P+++
Sbjct: 1   MNFHPPLRRSLSFSFASKPPWFHYFHSHSRDSATSNEILTILETVDPMEYALDRALPYLN 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDN--AFELYWKTLQE 120
             ++TSV+E++ N  LGFR FIW+ + +SL C  ++N ++D LVKDN   FELYW+ L++
Sbjct: 61  PGIVTSVVEEEPNRLLGFRFFIWTTKWRSLRCPVARNLVMDMLVKDNGCGFELYWRALEQ 120

Query: 121 LKDSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFD 159
           L+D  + I S AF+VLI+ + K GM EKAVESFG MRDF+
Sbjct: 121 LRDRGLPITSYAFTVLIKGFEKLGMAEKAVESFGRMRDFN 160

[Close]
BLAST of Cla97C02G044790 vs. TrEMBL
Match: tr|A0A2P5BR42|A0A2P5BR42_PARAD (Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_218010 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.4e-36
Identity = 77/160 (48.12%), Postives = 107/160 (66.88%), Query Frame = 0 

Query: 1   MKLRPDFLRPIIAYVVPKPPWFHLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHIS 60
           M   P   R +      KPPWFH FH+ +   ATSNE+ TI+ET+DP E  L+   P ++
Sbjct: 1   MNFHPPLRRSLSFSFASKPPWFHYFHAHSRDSATSNEILTIVETVDPMEYALDRALPFLN 60

Query: 61  SDVITSVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDN--AFELYWKTLQE 120
             ++TSV+E++ N  LGFR FIW+ + +SL C  ++N ++D LVKDN   FELYW+ L++
Sbjct: 61  PGIVTSVVEEEPNRLLGFRFFIWTTKWRSLRCPVARNLVMDMLVKDNGCGFELYWRALEQ 120

Query: 121 LKDSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFD 159
           L+D  + I S AF+VLI+ + K GM EKAVESFG MRDF+
Sbjct: 121 LRDRGLPITSYAFTVLIKGFEKLGMAEKAVESFGRMRDFN 160

[Close]
BLAST of Cla97C02G044790 vs. Swiss-Prot
Match: sp|Q9SAJ5|PP133_ARATH (Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana OX=3702 GN=At1g79540 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-29
Identity = 70/158 (44.30%), Postives = 95/158 (60.13%), Query Frame = 0 

Query: 7   FLRPIIAYVVPKPPWF-HLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHISSDVIT 66
           F R +I +   KP W    + S       S EV +I+    P E  LE + P +S ++IT
Sbjct: 6   FFRSVIQF-YSKPSWMQRSYSSGNAEFNISGEVISILAKKKPIEPALEPLVPFLSKNIIT 65

Query: 67  SVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELKDSAIE 126
           SVI+D+ N +LGFR FIW+ RR+ L    S   +ID L +DN  +LYW+TL+ELK   + 
Sbjct: 66  SVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 125

Query: 127 IPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFDWLGDM 164
           + S  F VLI AY+K GM EKAVESFG M++FD   D+
Sbjct: 126 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDV 162

[Close]
BLAST of Cla97C02G044790 vs. Swiss-Prot
Match: sp|Q9LN22|PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-04
Identity = 32/108 (29.63%), Postives = 49/108 (45.37%), Query Frame = 0 

Query: 63  VITSVIEDQSNPRLGFRL------FIWSLRRKSLCCNASQ--NFIIDRLVKDNAFELYWK 122
           V+  VIE   + R G  L      F W+  R      +    N +ID   K   F+L W 
Sbjct: 113 VVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWH 172

Query: 123 TLQELKDSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFDWLGD 163
            +  +K   +EI  + F++LI  Y +AG+  +AV  F  M D+  + D
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPD 220

[Close]
BLAST of Cla97C02G044790 vs. Swiss-Prot
Match: sp|Q9FLJ6|PP439_ARATH (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 31/124 (25.00%), Postives = 59/124 (47.58%), Query Frame = 0 

Query: 38  VSTIIETIDPFEDGLEVISPHISSDVITSVIE---DQSNPRLGFRLFIWSLRRKSLCCNA 97
           VS+ +  +D  E+ L  +S   SS+++T VIE   ++++PR   R F WS +      + 
Sbjct: 44  VSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHD 103

Query: 98  SQ-NFIIDRLVKDNAFELYWKTLQELKDSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGL 157
            + N+++  L +          L +L+     +    FS++ E   K G +E A+  F +
Sbjct: 104 KEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKI 163

[Close]
BLAST of Cla97C02G044790 vs. TAIR10
Match: AT1G79540.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 2.8e-30
Identity = 70/158 (44.30%), Postives = 95/158 (60.13%), Query Frame = 0 

Query: 7   FLRPIIAYVVPKPPWF-HLFHSPTDPIATSNEVSTIIETIDPFEDGLEVISPHISSDVIT 66
           F R +I +   KP W    + S       S EV +I+    P E  LE + P +S ++IT
Sbjct: 6   FFRSVIQF-YSKPSWMQRSYSSGNAEFNISGEVISILAKKKPIEPALEPLVPFLSKNIIT 65

Query: 67  SVIEDQSNPRLGFRLFIWSLRRKSLCCNASQNFIIDRLVKDNAFELYWKTLQELKDSAIE 126
           SVI+D+ N +LGFR FIW+ RR+ L    S   +ID L +DN  +LYW+TL+ELK   + 
Sbjct: 66  SVIKDEVNRQLGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVS 125

Query: 127 IPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFDWLGDM 164
           + S  F VLI AY+K GM EKAVESFG M++FD   D+
Sbjct: 126 VDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDV 162

[Close]
BLAST of Cla97C02G044790 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-05
Identity = 32/108 (29.63%), Postives = 49/108 (45.37%), Query Frame = 0 

Query: 63  VITSVIEDQSNPRLGFRL------FIWSLRRKSLCCNASQ--NFIIDRLVKDNAFELYWK 122
           V+  VIE   + R G  L      F W+  R      +    N +ID   K   F+L W 
Sbjct: 113 VVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWH 172

Query: 123 TLQELKDSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGLMRDFDWLGD 163
            +  +K   +EI  + F++LI  Y +AG+  +AV  F  M D+  + D
Sbjct: 173 LIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPD 220

[Close]
BLAST of Cla97C02G044790 vs. TAIR10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-05
Identity = 31/124 (25.00%), Postives = 59/124 (47.58%), Query Frame = 0 

Query: 38  VSTIIETIDPFEDGLEVISPHISSDVITSVIE---DQSNPRLGFRLFIWSLRRKSLCCNA 97
           VS+ +  +D  E+ L  +S   SS+++T VIE   ++++PR   R F WS +      + 
Sbjct: 44  VSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHD 103

Query: 98  SQ-NFIIDRLVKDNAFELYWKTLQELKDSAIEIPSDAFSVLIEAYSKAGMDEKAVESFGL 157
            + N+++  L +          L +L+     +    FS++ E   K G +E A+  F +
Sbjct: 104 KEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKI 163

The following BLAST results are available for this feature:
BLAST of Cla97C02G044790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023007126.11.1e-6981.01pentatricopeptide repeat-containing protein At1g79540 [Cucurbita maxima][more]
XP_022149645.11.9e-6981.65pentatricopeptide repeat-containing protein At1g79540 isoform X1 [Momordica char... [more]
XP_022948073.15.5e-6980.38pentatricopeptide repeat-containing protein At1g79540 [Cucurbita moschata][more]
XP_023534570.15.5e-6980.38pentatricopeptide repeat-containing protein At1g79540 [Cucurbita pepo subsp. pep... [more]
XP_004140023.11.3e-5469.33PREDICTED: pentatricopeptide repeat-containing protein At1g79540 [Cucumis sativu... [more]
BLAST of Cla97C02G044790 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KD52|A0A0A0KD52_CUCSA8.8e-5569.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G134370 PE=4 SV=1[more]
tr|A0A1S3C3I5|A0A1S3C3I5_CUCME1.1e-5470.89pentatricopeptide repeat-containing protein At1g79540 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A251PJN8|A0A251PJN8_PRUPE1.2e-3850.63Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G124200 PE=4 SV=1[more]
tr|A0A2P5API2|A0A2P5API2_9ROSA3.7e-3748.75Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=... [more]
tr|A0A2P5BR42|A0A2P5BR42_PARAD1.4e-3648.13Pentatricopeptide repeat OS=Parasponia andersonii OX=3476 GN=PanWU01x14_218010 P... [more]
BLAST of Cla97C02G044790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SAJ5|PP133_ARATH5.0e-2944.30Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana OX... [more]
sp|Q9LN22|PPR54_ARATH1.9e-0429.63Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop... [more]
sp|Q9FLJ6|PP439_ARATH2.5e-0425.00Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... [more]
BLAST of Cla97C02G044790 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79540.12.8e-3044.30Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G20300.11.1e-0529.63Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G61370.11.4e-0525.00Pentatricopeptide repeat (PPR) superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G044790.1Cla97C02G044790.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 57..164
e-value: 6.2E-7
score: 30.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 130..159
e-value: 0.0018
score: 16.3
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 16..133
NoneNo IPR availablePANTHERPTHR24015:SF768SUBFAMILY NOT NAMEDcoord: 16..133

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G044790Cla013435Watermelon (97103) v1wmwmbB316
Cla97C02G044790ClCG02G018860Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G044790Lsi10G014990Bottle gourd (USVL1VR-Ls)lsiwmbB052
Cla97C02G044790Carg11755Silver-seed gourdcarwmbB1119
Cla97C02G044790Bhi10G000713Wax gourdwgowmbB368
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G044790Silver-seed gourdcarwmbB0346
Cla97C02G044790Silver-seed gourdcarwmbB1114
Cla97C02G044790Cucumber (Gy14) v2cgybwmbB419
Cla97C02G044790Cucumber (Gy14) v2cgybwmbB495
Cla97C02G044790Cucumber (Gy14) v1cgywmbB174
Cla97C02G044790Cucurbita maxima (Rimu)cmawmbB568
Cla97C02G044790Cucurbita maxima (Rimu)cmawmbB614
Cla97C02G044790Cucurbita maxima (Rimu)cmawmbB637
Cla97C02G044790Cucurbita moschata (Rifu)cmowmbB545
Cla97C02G044790Cucurbita moschata (Rifu)cmowmbB588
Cla97C02G044790Wild cucumber (PI 183967)cpiwmbB465
Cla97C02G044790Wild cucumber (PI 183967)cpiwmbB548
Cla97C02G044790Cucumber (Chinese Long) v3cucwmbB459
Cla97C02G044790Cucumber (Chinese Long) v3cucwmbB544
Cla97C02G044790Cucumber (Chinese Long) v2cuwmbB442
Cla97C02G044790Cucumber (Chinese Long) v2cuwmbB524
Cla97C02G044790Melon (DHL92) v3.6.1medwmbB086
Cla97C02G044790Melon (DHL92) v3.5.1mewmbB109
Cla97C02G044790Melon (DHL92) v3.5.1mewmbB186