Cla97C02G041920 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G041920
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	TIR-NBS-LRR disease resistance protein
Location	Cla97Chr02 : 29760857 .. 29762127 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGAGTATGGTCTTAATAAGTTCAAGTGGGTTTTATCTAGATTTGGACTTACATTTTCATCTTTGCCCGCAAGTTTTTTTGTGAAAGATGGGCTTGTTGGACTAGACATGCAGCATTGCAGCATCAAACATTTGGGGAATAGGTTTGAGGTAAATTAATAGTTTGTAGTTTGTGAGACAGATTTTTCCAGAAACATTAATTATTATTGACTTTCTTTTTTCATGTTGTGCTTTAGAATTGTGAAGGGCTGAAGCATGTTGATCTCAGTTACTGTGAACTCTTGGAGGAAATTCCTGACTTATCTGCTGCAGTAAACCTTGAAAGTTTGTACCTAAGAGGATGCATAAGTTTAAGAATGATTCATGAGTCTGTTGTTTCTCTTAGCAAGCTGACTAGCTTGGACCTTGAAGGTTGTGTTAATCTTGAAAAGCTTCCTAGCTACCTCAGGTTAAAGTCTCTTGATTCCTTCTGTCTTTCTGACTGCCGTAAGCTTCAACAGCTTCCAGAGTTTGATGAAAACATGAAATCTTTAACGAGGATGGTTTTGGACTATACCGCCATAAAGGAGTTGCCTTCATCAATTCAATATCTTGCCAAGCTTGAATTTTTAAGCCTTAAAGGTTGTGCAGATCTCTTAGCTCTTCCAGATGCTATCTATTTGTTACAGAGTCTTGTGCAATTTCGTCTTCCTGGATGTTCTAAACTCGACATGTTTCCTTATCCAATTACCCAACCAACATTATTCCTTCTTTCGAACCTGACCCTATTGGACCTTAAAAATTGCAACCTATCAAATCTAGATTTCTTGGAAGCTTTATCTGCTGTCTGCACTTCCTTATCTCAATGGATGCCAGAGGTTGTGAATCATTGGTTACAGGTCCTGACAACATTGTTGATATAATATATGCAAATCAGGTACACCTATATGTCAAATTAAGGAAAAGTTTATTAAATTATTAATTTCTCCTAAACTGCCTATTAATATCTCTGTCCATATCAGGTTCCTTACATATATATATTTTTTGCATATCTATAGGATAAAGTCAATGGCTTAGAAACAAGAGAGTTCATTCTAATGAACAGTACGATCCCAGAATGGTTCAGCCATCAAAGTATGACAAGTTCAATAAGTGTTAGCCTTCAACACTATCCACGAGAGACATCAGTTTTGGCTGCCTGTGTTGTGTTCAAAGTAGATGGAGATTCATGTGAAGCGAAGGCCTCTATTAAATATGATGTGTCCATTGATGGTGAATCGTCGAAATAA

mRNA sequence

ATGTTTGAGTATGGTCTTAATAAGTTCAAGTGGGTTTTATCTAGATTTGGACTTACATTTTCATCTTTGCCCGCAAGTTTTTTTGTGAAAGATGGGCTTGTTGGACTAGACATGCAGCATTGCAGCATCAAACATTTGGGGAATAGGTTTGAGAATTGTGAAGGGCTGAAGCATGTTGATCTCAGTTACTGTGAACTCTTGGAGGAAATTCCTGACTTATCTGCTGCAGTAAACCTTGAAAGTTTGTACCTAAGAGGATGCATAAGTTTAAGAATGATTCATGAGTCTGTTGTTTCTCTTAGCAAGCTGACTAGCTTGGACCTTGAAGGTTGTGTTAATCTTGAAAAGCTTCCTAGCTACCTCAGGTTAAAGTCTCTTGATTCCTTCTGTCTTTCTGACTGCCGTAAGCTTCAACAGCTTCCAGAGTTTGATGAAAACATGAAATCTTTAACGAGGATGGTTTTGGACTATACCGCCATAAAGGAGTTGCCTTCATCAATTCAATATCTTGCCAAGCTTGAATTTTTAAGCCTTAAAGGTTGTGCAGATCTCTTAGCTCTTCCAGATGCTATCTATTTGTTACAGAGTCTTGTGCAATTTCGTCTTCCTGGATGTTCTAAACTCGACATGTTTCCTTATCCAATTACCCAACCAACATTATTCCTTCTTTCGAACCTGACCCTATTGGACCTTAAAAATTGCAACCTATCAAATCTAGATTTCTTGGAAGCTTTATCTGCTGTCTGCACTTCCTTATCTCAATGGATGCCAGAGGTTGTGAATCATTGGTTACAGGATAAAGTCAATGGCTTAGAAACAAGAGAGTTCATTCTAATGAACAGTACGATCCCAGAATGGTTCAGCCATCAAAGTATGACAAGTTCAATAAGTGTTAGCCTTCAACACTATCCACGAGAGACATCAGTTTTGGCTGCCTGTGTTGTGTTCAAAGTAGATGGAGATTCATGTGAAGCGAAGGCCTCTATTAAATATGATGTGTCCATTGATGGTGAATCGTCGAAATAA

Coding sequence (CDS)

ATGTTTGAGTATGGTCTTAATAAGTTCAAGTGGGTTTTATCTAGATTTGGACTTACATTTTCATCTTTGCCCGCAAGTTTTTTTGTGAAAGATGGGCTTGTTGGACTAGACATGCAGCATTGCAGCATCAAACATTTGGGGAATAGGTTTGAGAATTGTGAAGGGCTGAAGCATGTTGATCTCAGTTACTGTGAACTCTTGGAGGAAATTCCTGACTTATCTGCTGCAGTAAACCTTGAAAGTTTGTACCTAAGAGGATGCATAAGTTTAAGAATGATTCATGAGTCTGTTGTTTCTCTTAGCAAGCTGACTAGCTTGGACCTTGAAGGTTGTGTTAATCTTGAAAAGCTTCCTAGCTACCTCAGGTTAAAGTCTCTTGATTCCTTCTGTCTTTCTGACTGCCGTAAGCTTCAACAGCTTCCAGAGTTTGATGAAAACATGAAATCTTTAACGAGGATGGTTTTGGACTATACCGCCATAAAGGAGTTGCCTTCATCAATTCAATATCTTGCCAAGCTTGAATTTTTAAGCCTTAAAGGTTGTGCAGATCTCTTAGCTCTTCCAGATGCTATCTATTTGTTACAGAGTCTTGTGCAATTTCGTCTTCCTGGATGTTCTAAACTCGACATGTTTCCTTATCCAATTACCCAACCAACATTATTCCTTCTTTCGAACCTGACCCTATTGGACCTTAAAAATTGCAACCTATCAAATCTAGATTTCTTGGAAGCTTTATCTGCTGTCTGCACTTCCTTATCTCAATGGATGCCAGAGGTTGTGAATCATTGGTTACAGGATAAAGTCAATGGCTTAGAAACAAGAGAGTTCATTCTAATGAACAGTACGATCCCAGAATGGTTCAGCCATCAAAGTATGACAAGTTCAATAAGTGTTAGCCTTCAACACTATCCACGAGAGACATCAGTTTTGGCTGCCTGTGTTGTGTTCAAAGTAGATGGAGATTCATGTGAAGCGAAGGCCTCTATTAAATATGATGTGTCCATTGATGGTGAATCGTCGAAATAA

Protein sequence

MFEYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSLSKLTSLDLEGCVNLEKLPSYLRLKSLDSFCLSDCRKLQQLPEFDENMKSLTRMVLDYTAIKELPSSIQYLAKLEFLSLKGCADLLALPDAIYLLQSLVQFRLPGCSKLDMFPYPITQPTLFLLSNLTLLDLKNCNLSNLDFLEALSAVCTSLSQWMPEVVNHWLQDKVNGLETREFILMNSTIPEWFSHQSMTSSISVSLQHYPRETSVLAACVVFKVDGDSCEAKASIKYDVSIDGESSK

Homology

[Close]

BLAST of Cla97C02G041920 vs. NCBI nr
Match: KGN50663.1 (hypothetical protein Csa_5G207920 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.2e-75
Identity = 277/370 (74.86%), Postives = 297/370 (80.27%), Query Frame = 0


Query: 1   MFEYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVD 60
           MFEYGLNKFKWVLS FG+ FSSLPASF VK+GLVGLDMQHC IK+LGNRFENCE LKHVD
Sbjct: 48  MFEYGLNKFKWVLSSFGIRFSSLPASFLVKEGLVGLDMQHCCIKYLGNRFENCERLKHVD 107

Query: 61  LSYCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSLSXXXXXXXXXXXXXXXXXXX 120
           LSYCELLEEIPDLS AVNLE LYLRGCISL+ IHESV    XXXXXXXXXXXXXXXXXXX
Sbjct: 108 LSYCELLEEIPDLSVAVNLEYLYLRGCISLKTIHESVSXXXXXXXXXXXXXXXXXXXXXX 167

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 168 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 227

Query: 181 XXXXXXXXXXXXXXXXXXXFRLPGCSKLDMFPYPITQPTLFLLSNLTLLDLKNCNLSNLD 240
           XXXXXXXXXXXXXXXXXXX   PGCSKL MFP P T+  +FLLS LT+LDLKNCNLSN+D
Sbjct: 228 XXXXXXXXXXXXXXXXXXXXXXPGCSKLHMFPCPTTE-QIFLLSKLTILDLKNCNLSNID 287

Query: 241 FLEALSAV--------------------------CTSLSQWMPEV--VNHWLQDKVNGLE 300
           FLE LS                            C SL      +  + +  QD++N   
Sbjct: 288 FLEPLSXXXXXXXXXFLLQIPNLPHSIQTMDARGCESLVTGPDNLDDIIYANQDRLNDSG 347

Query: 301 TREFILMNSTIPEWFSHQ-SMTSSISVSLQHYPRETSVLAACVVFKVDGDSCEAKASIKY 342
           +REFILMN  IPEWF+HQ + TSSISVSLQH P++T VLAACV+FKVDGDSCEAKASIKY
Sbjct: 348 SREFILMNGMIPEWFNHQTTTTSSISVSLQHCPQKTQVLAACVIFKVDGDSCEAKASIKY 407

[Close]

BLAST of Cla97C02G041920 vs. NCBI nr
Match: XP_008454602.1 (PREDICTED: LOW QUALITY PROTEIN: disease resistance protein RPP4-like [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-19
Identity = 112/329 (34.04%), Postives = 142/329 (43.16%), Query Frame = 0


Query: 3   EYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLS 62
           EY  N  KW+    G    SLP+   +K+ LVGLD+QH  IK  G R E+CE LKHVDLS
Sbjct: 463 EYLPNSLKWI-KWHGFAQPSLPSRLIMKN-LVGLDLQHSFIKKFGKRLEDCERLKHVDLS 522

Query: 63  YCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSLSXXXXXXXXXXXXXXXXXXXXX 122
           Y  LLE+IPD SAA NLE LYL  C +L+MI +SV SL                      
Sbjct: 523 YSTLLEKIPDFSAASNLEELYLINCTNLKMIDKSVFSL---------------------- 582

Query: 123 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
                                                                      X
Sbjct: 583 ------------------------------------------------------HKLTIX 642

Query: 183 XXXXXXXXXXXXXXXXXFRLPGCSKLDMFPYPITQPTLFLLSNLTLLDLKNC-------- 242
           XXXXXXXXXXXXXXXXX                    L   SNL  L L+ C        
Sbjct: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSAASNLKSLYLQECTNLRGIHE 700

Query: 243 NLSNLDFLEALS-AVCTSLSQWMPEVVNHWLQDKVNGLETREFILMNSTIPEWFSHQSMT 302
           ++ +LD L  +    CT+L   + E+             +REF+LM + +P+WFS+++ T
Sbjct: 703 SIGSLDMLVTMDLRRCTNLDPTLGEI-------------SREFLLMGTDVPKWFSYKTTT 700

Query: 303 SSISVSLQHYPRETSVLAACVVFKVDGDS 323
           + +S S +HYP     LAACV FKV+G S
Sbjct: 763 NWMSASFRHYPDMARTLAACVSFKVNGSS 700

[Close]

BLAST of Cla97C02G041920 vs. NCBI nr
Match: KGN51220.1 (hypothetical protein Csa_5G494390 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 9.7e-17
Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 1   MFEYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVD 60
           +FEY  N  KW+         S   SF VK  LVGL M+    K     FENC+ +KHVD
Sbjct: 582 IFEYLPNSLKWIEWSTFYVNQSSSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTMKHVD 641

Query: 61  LSYCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSLS 102
           LSYC  L+E P+ SA +NLE LYLRGC SL++IHESV SLS
Sbjct: 642 LSYCGTLKETPNFSATLNLEKLYLRGCTSLKVIHESVASLS 682

[Close]

BLAST of Cla97C02G041920 vs. NCBI nr
Match: XP_011656234.1 (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 9.7e-17
Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 1   MFEYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVD 60
           +FEY  N  KW+         S   SF VK  LVGL M+    K     FENC+ +KHVD
Sbjct: 582 IFEYLPNSLKWIEWSTFYVNQSSSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTMKHVD 641

Query: 61  LSYCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSLS 102
           LSYC  L+E P+ SA +NLE LYLRGC SL++IHESV SLS
Sbjct: 642 LSYCGTLKETPNFSATLNLEKLYLRGCTSLKVIHESVASLS 682

[Close]

BLAST of Cla97C02G041920 vs. NCBI nr
Match: XP_008455171.1 (PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16
Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 3   EYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLS 62
           EY  +  KW+    G +  SLP S F+K  LVGLD+ H  IK+LG  F++C+ LKH DLS
Sbjct: 577 EYLPDSLKWI-KWHGFSHRSLPLS-FLKKNLVGLDLSHSFIKNLGKGFKDCKRLKHGDLS 636

Query: 63  YCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSL 101
           Y  LLE+IPD  A  NLE LYL  C +LR+I +SVVSL
Sbjct: 637 YSSLLEKIPDFPATSNLEELYLNNCTNLRIIPKSVVSL 672

HSP 2 Score: 60.8 bits (146), Expect = 1.0e-05
Identity = 54/182 (29.67%), Postives = 75/182 (41.21%), Query Frame = 0


Query: 211  FPYPITQPTLFLLSNLTLLDLKNCNLSNLDFLEALSAVCTSLS----------------- 270
            FP+ +  P   L S  TLLDL+ CN+SN+DFL  L  V   LS                 
Sbjct: 949  FPH-LLVPKESLCSKFTLLDLRCCNISNVDFLXILCKVAPFLSSILLSENKFSSLPSCLH 1008

Query: 271  -------------QWMPEVVN--HWL-------------------------QDKVNGLET 330
                         +++ E+ N  H +                         QD   G  T
Sbjct: 1009 KFMSLWNLQLRNCKFLQEIPNLPHCIQKLDATGCSLLGRSPDNIMDIISSKQDVALGDFT 1068

Query: 331  REFILMNSTIPEWFSHQSMTSSISVSLQHYPRETSVLAACVVFKVDGDSCEAKASIKYDV 336
            REF+LMN+ IPEWF +QS+++S+ VS +H       LA    F+V GDS    A +   +
Sbjct: 1069 REFVLMNTGIPEWFKYQSISTSVRVSFRHDLNMERTLATYATFQVVGDSHRGMALVSCKI 1128

[Close]

BLAST of Cla97C02G041920 vs. TrEMBL
Match: tr|A0A0A0KM44|A0A0A0KM44_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G207920 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.0e-76
Identity = 277/370 (74.86%), Postives = 297/370 (80.27%), Query Frame = 0


Query: 1   MFEYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVD 60
           MFEYGLNKFKWVLS FG+ FSSLPASF VK+GLVGLDMQHC IK+LGNRFENCE LKHVD
Sbjct: 48  MFEYGLNKFKWVLSSFGIRFSSLPASFLVKEGLVGLDMQHCCIKYLGNRFENCERLKHVD 107

Query: 61  LSYCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSLSXXXXXXXXXXXXXXXXXXX 120
           LSYCELLEEIPDLS AVNLE LYLRGCISL+ IHESV    XXXXXXXXXXXXXXXXXXX
Sbjct: 108 LSYCELLEEIPDLSVAVNLEYLYLRGCISLKTIHESVSXXXXXXXXXXXXXXXXXXXXXX 167

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 168 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 227

Query: 181 XXXXXXXXXXXXXXXXXXXFRLPGCSKLDMFPYPITQPTLFLLSNLTLLDLKNCNLSNLD 240
           XXXXXXXXXXXXXXXXXXX   PGCSKL MFP P T+  +FLLS LT+LDLKNCNLSN+D
Sbjct: 228 XXXXXXXXXXXXXXXXXXXXXXPGCSKLHMFPCPTTE-QIFLLSKLTILDLKNCNLSNID 287

Query: 241 FLEALSAV--------------------------CTSLSQWMPEV--VNHWLQDKVNGLE 300
           FLE LS                            C SL      +  + +  QD++N   
Sbjct: 288 FLEPLSXXXXXXXXXFLLQIPNLPHSIQTMDARGCESLVTGPDNLDDIIYANQDRLNDSG 347

Query: 301 TREFILMNSTIPEWFSHQ-SMTSSISVSLQHYPRETSVLAACVVFKVDGDSCEAKASIKY 342
           +REFILMN  IPEWF+HQ + TSSISVSLQH P++T VLAACV+FKVDGDSCEAKASIKY
Sbjct: 348 SREFILMNGMIPEWFNHQTTTTSSISVSLQHCPQKTQVLAACVIFKVDGDSCEAKASIKY 407

[Close]

BLAST of Cla97C02G041920 vs. TrEMBL
Match: tr|A0A1S3BZ02|A0A1S3BZ02_CUCME (LOW QUALITY PROTEIN: disease resistance protein RPP4-like OS=Cucumis melo OX=3656 GN=LOC103494972 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-19
Identity = 112/329 (34.04%), Postives = 142/329 (43.16%), Query Frame = 0


Query: 3   EYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLS 62
           EY  N  KW+    G    SLP+   +K+ LVGLD+QH  IK  G R E+CE LKHVDLS
Sbjct: 463 EYLPNSLKWI-KWHGFAQPSLPSRLIMKN-LVGLDLQHSFIKKFGKRLEDCERLKHVDLS 522

Query: 63  YCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSLSXXXXXXXXXXXXXXXXXXXXX 122
           Y  LLE+IPD SAA NLE LYL  C +L+MI +SV SL                      
Sbjct: 523 YSTLLEKIPDFSAASNLEELYLINCTNLKMIDKSVFSL---------------------- 582

Query: 123 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
                                                                      X
Sbjct: 583 ------------------------------------------------------HKLTIX 642

Query: 183 XXXXXXXXXXXXXXXXXFRLPGCSKLDMFPYPITQPTLFLLSNLTLLDLKNC-------- 242
           XXXXXXXXXXXXXXXXX                    L   SNL  L L+ C        
Sbjct: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSAASNLKSLYLQECTNLRGIHE 700

Query: 243 NLSNLDFLEALS-AVCTSLSQWMPEVVNHWLQDKVNGLETREFILMNSTIPEWFSHQSMT 302
           ++ +LD L  +    CT+L   + E+             +REF+LM + +P+WFS+++ T
Sbjct: 703 SIGSLDMLVTMDLRRCTNLDPTLGEI-------------SREFLLMGTDVPKWFSYKTTT 700

Query: 303 SSISVSLQHYPRETSVLAACVVFKVDGDS 323
           + +S S +HYP     LAACV FKV+G S
Sbjct: 763 NWMSASFRHYPDMARTLAACVSFKVNGSS 700

[Close]

BLAST of Cla97C02G041920 vs. TrEMBL
Match: tr|A0A0A0KNK0|A0A0A0KNK0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494390 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.4e-17
Identity = 53/101 (52.48%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 1   MFEYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVD 60
           +FEY  N  KW+         S   SF VK  LVGL M+    K     FENC+ +KHVD
Sbjct: 582 IFEYLPNSLKWIEWSTFYVNQSSSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTMKHVD 641

Query: 61  LSYCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSLS 102
           LSYC  L+E P+ SA +NLE LYLRGC SL++IHESV SLS
Sbjct: 642 LSYCGTLKETPNFSATLNLEKLYLRGCTSLKVIHESVASLS 682

[Close]

BLAST of Cla97C02G041920 vs. TrEMBL
Match: tr|A0A1S3C0A4|A0A1S3C0A4_CUCME (LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103495402 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16
Identity = 52/98 (53.06%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 3   EYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLS 62
           EY  +  KW+    G +  SLP S F+K  LVGLD+ H  IK+LG  F++C+ LKH DLS
Sbjct: 577 EYLPDSLKWI-KWHGFSHRSLPLS-FLKKNLVGLDLSHSFIKNLGKGFKDCKRLKHGDLS 636

Query: 63  YCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSL 101
           Y  LLE+IPD  A  NLE LYL  C +LR+I +SVVSL
Sbjct: 637 YSSLLEKIPDFPATSNLEELYLNNCTNLRIIPKSVVSL 672

HSP 2 Score: 60.8 bits (146), Expect = 6.7e-06
Identity = 54/182 (29.67%), Postives = 75/182 (41.21%), Query Frame = 0


Query: 211  FPYPITQPTLFLLSNLTLLDLKNCNLSNLDFLEALSAVCTSLS----------------- 270
            FP+ +  P   L S  TLLDL+ CN+SN+DFL  L  V   LS                 
Sbjct: 949  FPH-LLVPKESLCSKFTLLDLRCCNISNVDFLXILCKVAPFLSSILLSENKFSSLPSCLH 1008

Query: 271  -------------QWMPEVVN--HWL-------------------------QDKVNGLET 330
                         +++ E+ N  H +                         QD   G  T
Sbjct: 1009 KFMSLWNLQLRNCKFLQEIPNLPHCIQKLDATGCSLLGRSPDNIMDIISSKQDVALGDFT 1068

Query: 331  REFILMNSTIPEWFSHQSMTSSISVSLQHYPRETSVLAACVVFKVDGDSCEAKASIKYDV 336
            REF+LMN+ IPEWF +QS+++S+ VS +H       LA    F+V GDS    A +   +
Sbjct: 1069 REFVLMNTGIPEWFKYQSISTSVRVSFRHDLNMERTLATYATFQVVGDSHRGMALVSCKI 1128

[Close]

BLAST of Cla97C02G041920 vs. TrEMBL
Match: tr|A0A1S3C088|A0A1S3C088_CUCME (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.9e-16
Identity = 53/98 (54.08%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 3   EYGLNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLS 62
           +Y  N  KW+  R G    SLP+ F  K+ LVGLD++H SIK  G R E CE LKHVDLS
Sbjct: 612 KYLPNSLKWIEWR-GFAHRSLPSCFITKN-LVGLDLRHSSIKRFGKRLEGCERLKHVDLS 671

Query: 63  YCELLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSL 101
           Y  LLE+I D S A NLE L+L  C +L MI +SV SL
Sbjct: 672 YSTLLEQINDFSPASNLEELHLINCTNLGMIDKSVFSL 707

[Close]

BLAST of Cla97C02G041920 vs. Swiss-Prot
Match: sp|Q9C7X0|ADR2_ARATH (Disease resistance protein ADR2 OS=Arabidopsis thaliana OX=3702 GN=ADR2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 23  LPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPDLSAAVNLESL 82
           LP+SFF  + LV ++MQ   ++ L    +    LK +DLS    L E+PDLS A NLE L
Sbjct: 594 LPSSFFA-ENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDL 653

Query: 83  YLRGCISLRMIHESVVSL 101
           Y+  C +L  +  S+ +L
Sbjct: 654 YVGSCTALVELPSSIGNL 670

[Close]

BLAST of Cla97C02G041920 vs. Swiss-Prot
Match: sp|Q9CAK1|RLM1B_ARATH (Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 22  SLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPDLSAAVNLES 81
           SLP + F  + LV L+M    +++L    +  + LK +DLS  + L+++PDLS A NLE 
Sbjct: 598 SLPPT-FNPEHLVELNMHSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNATNLEY 657

Query: 82  LYLRGCISLRMIHESVVSL 101
           LYL GC SL  I  S+  L
Sbjct: 658 LYLMGCESLIEIPSSISHL 675

[Close]

BLAST of Cla97C02G041920 vs. Swiss-Prot
Match: sp|F4J339|RPP1_ARATH (Probable disease resistance protein RPP1 OS=Arabidopsis thaliana OX=3702 GN=RPP1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.9e-06
Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 13  LSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPD 72
           L+ +G     LP S F  + LV LDM+  +++ L    +    LK +DLSY   L+E+P+
Sbjct: 674 LNWYGYESLCLP-STFNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPN 733

Query: 73  LSAAVNLESLYLRGC 88
           LS A NLE L LR C
Sbjct: 734 LSTATNLEELKLRNC 747

[Close]

BLAST of Cla97C02G041920 vs. Swiss-Prot
Match: sp|F4JNA9|RPP4_ARATH (Disease resistance protein RPP4 OS=Arabidopsis thaliana OX=3702 GN=RPP4 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-05
Identity = 29/63 (46.03%), Postives = 36/63 (57.14%), Query Frame = 0


Query: 28  FVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPDLSAAVNLESLYLRGC 87
           F  + L  LD+  C  + L    ++   LK +DLS  E L EIPDLS A NL+ LYL GC
Sbjct: 901 FRPEYLTFLDVSGCKHEKLWEGIQSLGSLKRMDLSESENLTEIPDLSKATNLKRLYLNGC 960

Query: 88  ISL 91
            SL
Sbjct: 961 KSL 963

[Close]

BLAST of Cla97C02G041920 vs. Swiss-Prot
Match: sp|F4KHH8|RPS6C_ARATH (Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-05
Identity = 33/85 (38.82%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 13  LSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPD 72
           L RF    S    S F  + LV L MQ   ++ L +   +  GL+++DL     L+EIPD
Sbjct: 592 LLRFDRYPSKCLPSNFHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPD 651

Query: 73  LSAAVNLESLYLRGCISLRMIHESV 98
           LS A NLE+L L  C SL  +  S+
Sbjct: 652 LSMATNLETLKLSSCSSLVELPSSI 676

[Close]

BLAST of Cla97C02G041920 vs. TAIR10
Match: AT1G56510.1 (Disease resistance protein (TIR-NBS-LRR class))

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 23  LPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPDLSAAVNLESL 82
           LP+SFF  + LV ++MQ   ++ L    +    LK +DLS    L E+PDLS A NLE L
Sbjct: 594 LPSSFFA-ENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLEDL 653

Query: 83  YLRGCISLRMIHESVVSL 101
           Y+  C +L  +  S+ +L
Sbjct: 654 YVGSCTALVELPSSIGNL 670

[Close]

BLAST of Cla97C02G041920 vs. TAIR10
Match: AT1G63880.1 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 22  SLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPDLSAAVNLES 81
           SLP + F  + LV L+M    +++L    +  + LK +DLS  + L+++PDLS A NLE 
Sbjct: 598 SLPPT-FNPEHLVELNMHSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQLPDLSNATNLEY 657

Query: 82  LYLRGCISLRMIHESVVSL 101
           LYL GC SL  I  S+  L
Sbjct: 658 LYLMGCESLIEIPSSISHL 675

[Close]

BLAST of Cla97C02G041920 vs. TAIR10
Match: AT5G38350.1 (Disease resistance protein (NBS-LRR class) family)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 6   LNKFKWVLSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCE 65
           L   +W  SRF +T   LP++F  K  LV + M++  +++L    +    LK +DLS  +
Sbjct: 435 LRLIEW--SRFPMT--CLPSNFCTK-YLVEIRMKNSKLQNLWQGNQPLGNLKRMDLSESK 494

Query: 66  LLEEIPDLSAAVNLESLYLRGCISLRMIHESVVSL 101
            L+E+PDLS A NLE L + GCISL  +  S+  L
Sbjct: 495 HLKELPDLSTATNLEYLIMSGCISLVELPSSIGKL 524

[Close]

BLAST of Cla97C02G041920 vs. TAIR10
Match: AT3G44480.1 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 53.1 bits (126), Expect = 3.8e-07
Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 13  LSRFGLTFSSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPD 72
           L+ +G     LP S F  + LV LDM+  +++ L    +    LK +DLSY   L+E+P+
Sbjct: 674 LNWYGYESLCLP-STFNPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPN 733

Query: 73  LSAAVNLESLYLRGC 88
           LS A NLE L LR C
Sbjct: 734 LSTATNLEELKLRNC 747

[Close]

BLAST of Cla97C02G041920 vs. TAIR10
Match: AT5G18360.1 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 52.8 bits (125), Expect = 5.0e-07
Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 21  SSLPASFFVKDGLVGLDMQHCSIKHLGNRFENCEGLKHVDLSYCELLEEIPDLSAAVNLE 80
           +S+P S F    LV ++++   ++ L    +    LK +DLS  E L+EIPDLS AVN+E
Sbjct: 598 TSMPLS-FCPQFLVVINIRESQLEKLWEGTQPLRSLKQMDLSKSENLKEIPDLSKAVNIE 657

Query: 81  SLYLRGCISLRMIHESVVSLS 102
            L L  C SL M+  S+ +L+
Sbjct: 658 ELCLSYCGSLVMLPSSIKNLN 677

The following BLAST results are available for this feature:

BLAST of Cla97C02G041920 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN50663.1	1.2e-75	74.86	hypothetical protein Csa_5G207920 [Cucumis sativus]	[more]
XP_008454602.1	2.1e-19	34.04	PREDICTED: LOW QUALITY PROTEIN: disease resistance protein RPP4-like [Cucumis me...	[more]
KGN51220.1	9.7e-17	52.48	hypothetical protein Csa_5G494390 [Cucumis sativus]	[more]
XP_011656234.1	9.7e-17	52.48	PREDICTED: TMV resistance protein N-like [Cucumis sativus]	[more]
XP_008455171.1	1.7e-16	53.06	PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo]	[more]

BLAST of Cla97C02G041920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KM44\|A0A0A0KM44_CUCSA	8.0e-76	74.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G207920 PE=4 SV=1	[more]
tr\|A0A1S3BZ02\|A0A1S3BZ02_CUCME	1.4e-19	34.04	LOW QUALITY PROTEIN: disease resistance protein RPP4-like OS=Cucumis melo OX=365...	[more]
tr\|A0A0A0KNK0\|A0A0A0KNK0_CUCSA	6.4e-17	52.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494390 PE=4 SV=1	[more]
tr\|A0A1S3C0A4\|A0A1S3C0A4_CUCME	1.1e-16	53.06	LOW QUALITY PROTEIN: TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A1S3C088\|A0A1S3C088_CUCME	1.9e-16	54.08	TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388...	[more]

BLAST of Cla97C02G041920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C7X0\|ADR2_ARATH	2.4e-06	39.74	Disease resistance protein ADR2 OS=Arabidopsis thaliana OX=3702 GN=ADR2 PE=2 SV=...	[more]
sp\|Q9CAK1\|RLM1B_ARATH	2.4e-06	41.77	Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 S...	[more]
sp\|F4J339\|RPP1_ARATH	6.9e-06	41.33	Probable disease resistance protein RPP1 OS=Arabidopsis thaliana OX=3702 GN=RPP1...	[more]
sp\|F4JNA9\|RPP4_ARATH	1.2e-05	46.03	Disease resistance protein RPP4 OS=Arabidopsis thaliana OX=3702 GN=RPP4 PE=1 SV=...	[more]
sp\|F4KHH8\|RPS6C_ARATH	1.2e-05	38.82	Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=...	[more]

BLAST of Cla97C02G041920 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56510.1	1.3e-07	39.74	Disease resistance protein (TIR-NBS-LRR class)	[more]
AT1G63880.1	1.3e-07	41.77	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G38350.1	1.3e-07	38.95	Disease resistance protein (NBS-LRR class) family	[more]
AT3G44480.1	3.8e-07	41.33	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G18360.1	5.0e-07	39.51	Disease resistance protein (TIR-NBS-LRR class) family	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G041920.1	Cla97C02G041920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 10..121 e-value: 1.4E-20 score: 75.0 coord: 122..272 e-value: 3.2E-18 score: 67.3
None	No IPR available	PANTHER	PTHR11017	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 8..242
None	No IPR available	SUPERFAMILY	SSF52058	L domain-like	coord: 13..246
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 225..246 score: 7.319
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 102..124 score: 5.979
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 55..77 score: 5.078

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G041920	Cucumber (Chinese Long) v3	cucwmbB123
Cla97C02G041920	Bottle gourd (USVL1VR-Ls)	lsiwmbB087
Cla97C02G041920	Melon (DHL92) v3.6.1	medwmbB367
Cla97C02G041920	Melon (DHL92) v3.5.1	mewmbB376
Cla97C02G041920	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G041920	Watermelon (97103) v1	wmwmbB316
Cla97C02G041920	Silver-seed gourd	carwmbB0746
Cla97C02G041920	Cucumber (Gy14) v2	cgybwmbB114
Cla97C02G041920	Cucumber (Gy14) v1	cgywmbB100
Cla97C02G041920	Cucumber (Chinese Long) v2	cuwmbB118
Cla97C02G041920	Cucurbita maxima (Rimu)	cmawmbB175
Cla97C02G041920	Cucurbita maxima (Rimu)	cmawmbB810
Cla97C02G041920	Cucurbita moschata (Rifu)	cmowmbB161
Cla97C02G041920	Cucurbita moschata (Rifu)	cmowmbB785
Cla97C02G041920	Wild cucumber (PI 183967)	cpiwmbB120