Cla97C02G036030 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G036030
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Transmembrane protein, putative
Location	Cla97Chr02 : 14494608 .. 14497114 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGATTGCAGGCCATTGGGTTTCTTGTTGGGGCTGCCATTTGCCTTGGTTGCCTTAGTTTTATCTGTACTTGGGGCAGTCATCTGGATCATTGGGTGAGTTTTTTTTTTTTTTTTTTTAATTTTTTTTAATTTTTTTAATTTTGAAGTGATTAAAAGTGACAAGTACTGAACTGGGTTGGGGCTGTGTTTTTCTGTTTCTATTGCAGATCTGTGCTGAGTTGCCTGTGTCCGTGTTGCGTGTGCTTTGCGGGGATTGCAAATTTGGCGGTGGGGCTTGTCAAACTGCCGGTCAAGGTGCTCCGATGGTTCACTCATCAAATACCCTGTTGATTCCTTCGCTTTTTTTATTTGTTTTTTTTTTAATAATTTAATTTCCATTATTCAATCCATTATTCCAAGTTTCCTAGTTGTAGATTATTTGGGATGTTTTAATTAGTTGATGTGTATTTGTAATAATGCCATATTTTTCAACATTGATTCTTTGATTGGTTGCCTTTGTTGACCTCAAACCTGTTTCCGCGTGGAATCTCGCTCCACTGTCGCTCAACGTGGGGTGTGGGCTGGGGTCATATCTCTACCGTTTACTCTTTAATTTTTTAATATGTTTTTAATTGAATGGGTTTTACAATGTAATTTAATTTCTTTGGGATACCATTCTTATAGAAATTTCGACCAATAATAGAATAGGTCAAACCTAACATTGAATTTGTGCATATTATTGTTTTTCTTTCTTTTGAAAGTAATGCGTAATTGTAGTTACATGTTAATGGTTAATCAAAAATCAATATCTTATGGGTGTTACAATTCTAGGTTGTTTTTGGATCTTTACATTAATTAAATTTGTATTCATTTATTTTATTTCCTAAACAAATAGTTATCATATTTGCAAGTATCATCAAGGCACTATGTAAATCTGCATATTCACTACAATAAAAGTGAGTTTCCATGACATAAGGGTATAGCCGGATTGAGGGGAGAGAAAAAACAATGTCATAAATGAAAAAAAAAAATTGCTGTTTTTTTCTAGCAACTTTAGGTTTTTTTTTTTTTTTTTCATGACATTTTGCAATGTCATCGATTTATGACATTTATTAATTATCATTAAATAAATTTAATTATTTACTTTTTAAAGAAATTCAAAATACATGCTTTAAAAAAGAGGAAAAGAAAGGAAAATTGCCAAAAATAACACCCTTAAGTTTTCATATTAGAAAATTAGCACCCTTTTTGAAAATTCGTTCAAAGAGTTTTTCTCATGCCATCTCGCTCGAGATCGAGCCTTGAGATTGATTTAAAAATATGAAAAATATAAGGGATAACAACATAGAAGACCCTAATAAATGCCCTATATTTCAATAATGTCCACTTTTTTTATTATTATTTTAAAAATGTCCATGAAGGTTTCTTAATTACACATAAATTAGGGTCTAATTACCTTTTAGTCCCAAAACTACAATTAATTAAAAACTACAATTAATTAAAAATATTTAAAGGAAAATTTGTACGAATGACCTAAATTGAAGGGCCTAAATAAAATTTGGCCTCCCCCTAGATTTTCAATGAAATATGGCATTTTGATAGTTGACTTTCTAGACAATACTGCTCTCGCTCCTTGGCTCTCGTCTCTCGATACTCGCGCTCCCGACTCTCATAAGTTGGCACTCAACCGTTCAACCATTGCTAGATTTGAAAAGTGGGGTACCATATAAAATCTCTCGACCAATTGTACAATTCTTAATGTCTCTCGATTCTTTCTTCTCTCACACTTGACCTACTGACGAACACCTACTGGACGATCGACTCTTCGATGATTGACTATTCAATTTTCTCTTGCACAACTTCAGATTGTTAGTTGTCATTTATCGAACAAAGGTGTGCCTTTATTTCGCGTTCGTTTGCGTTTTAGTCTGGGGTATGATTCGTTTGCTTTCGTTTGCAACTTTTTTGTTGCATGTGCTGGTGTTAGGGTTTGTAGAAGTGCCCAAATTGTTCAATAGATTAGGGTTTAGAAGATTAGGGGACTGAGGCACGAGAGAATGCACTAAGATTGAGTGTAGGAGATGAGAGTATTTTGGAGATTGTGGGAGACGATATTTGTTTGCTCTCGACTCTCGGTTTTCTTTTGCATGTGCTGATGTAGATGGTTGTGTGGGTGCTCTTGGTGGATGGTCGAGAGTAGAAAGTCGAGATATCGAGACCTAGGGTTCTAGACAAACCGAGAGTCGAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCGAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCCGAGAGTCGTGAGCGAGAATCAAGAGTCGAGAGCGAGAGTTTAACATAATGCATTTTTTGTTTAATCTGTTTATTTTCTTTTATCTAATCATGTTTTTTTATTGCACTTGTAGACGACCAACTTCAAGATTGTTGCTGAAGATCGTTTTCCTGCCTAA

mRNA sequence

ATGGGCGATTGCAGGCCATTGGGTTTCTTGTTGGGGCTGCCATTTGCCTTGGTTGCCTTAGTTTTATCTGTACTTGGGGCAGTCATCTGGATCATTGGATCTGTGCTGAGTTGCCTGTGTCCGTGTTGCGTGTGCTTTGCGGGGATTGCAAATTTGGCGGTGGGGCTTGTCAAACTGCCGGTCAAGACGACCAACTTCAAGATTGTTGCTGAAGATCGTTTTCCTGCCTAA

Coding sequence (CDS)

ATGGGCGATTGCAGGCCATTGGGTTTCTTGTTGGGGCTGCCATTTGCCTTGGTTGCCTTAGTTTTATCTGTACTTGGGGCAGTCATCTGGATCATTGGATCTGTGCTGAGTTGCCTGTGTCCGTGTTGCGTGTGCTTTGCGGGGATTGCAAATTTGGCGGTGGGGCTTGTCAAACTGCCGGTCAAGACGACCAACTTCAAGATTGTTGCTGAAGATCGTTTTCCTGCCTAA

Protein sequence

MGDCRPLGFLLGLPFALVALVLSVLGAVIWIIGSVLSCLCPCCVCFAGIANLAVGLVKLPVKTTNFKIVAEDRFPA

Homology

[Close]

BLAST of Cla97C02G036030 vs. NCBI nr
Match: XP_007210071.1 (uncharacterized protein LOC18776937 [Prunus persica] >ONI05381.1 hypothetical protein PRUPE_5G004400 [Prunus persica])

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-05
Identity = 59/75 (78.67%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MGDCRPLGFLLGLPFALVAL XXXXXXXXXXXXXXXXXXXXXXXX  G+ANLAV L+KLP
Sbjct: 1  MGDCRPLGFLLGLPFALVALVXXXXXXXXXXXXXXXXXXXXXXXXVGGLANLAVTLIKLP 60

Query: 61 VKTTNFKIVAEDRFP 76
          VK   + I   D+ P
Sbjct: 61 VKIIRWFI---DKIP 72

[Close]

BLAST of Cla97C02G036030 vs. NCBI nr
Match: XP_008342914.1 (PREDICTED: uncharacterized protein LOC103405667 [Malus domestica] >XP_009342637.1 PREDICTED: uncharacterized protein LOC103934605 [Pyrus x bretschneideri])

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05
Identity = 31/62 (50.00%), Postives = 34/62 (54.84%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MGDCRPLGFLLGLPFAL+AL                           G+ANLAV L+KLP
Sbjct: 1  MGDCRPLGFLLGLPFALIALVLSVLGAVIWVFGTVLSCLCPCCICFSGLANLAVSLIKLP 60

Query: 61 VK 63
          VK
Sbjct: 61 VK 62

[Close]

BLAST of Cla97C02G036030 vs. NCBI nr
Match: XP_018857460.1 (PREDICTED: uncharacterized protein LOC109019590 [Juglans regia])

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05
Identity = 36/68 (52.94%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          M DCRPLGFLLGLPFALVAL                      XXX  G+AN+AVGLVKLP
Sbjct: 1  MEDCRPLGFLLGLPFALVALILSLVGAVIWIFGSVLSCLCPCXXXCTGLANMAVGLVKLP 60

Query: 61 VKTTNFKI 69
          VK   + I
Sbjct: 61 VKVLRWFI 68

[Close]

BLAST of Cla97C02G036030 vs. NCBI nr
Match: PQQ00988.1 (uncharacterized protein Pyn_16173 [Prunus yedoensis var. nudiflora] >PQQ05067.1 uncharacterized protein Pyn_16522 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05
Identity = 43/62 (69.35%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MGDCRPLGFLLGLPFAL+AL    XXXXXXXXXXX            GIANLAV L+KLP
Sbjct: 1  MGDCRPLGFLLGLPFALIALVLSVXXXXXXXXXXXLSCLCPCCICVGGIANLAVTLIKLP 60

Query: 61 VK 63
          VK
Sbjct: 61 VK 62

[Close]

BLAST of Cla97C02G036030 vs. NCBI nr
Match: OMO56991.1 (hypothetical protein COLO4_35520 [Corchorus olitorius])

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-05
Identity = 33/68 (48.53%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MGDCRPLGFLLGLPFALVAL                           G+AN AV LVKLP
Sbjct: 1  MGDCRPLGFLLGLPFALVALVLPVVGATIWILGTILSCMCPCCICCAGLANFAVDLVKLP 60

Query: 61 VKTTNFKI 69
          VK   + I
Sbjct: 61 VKVLRWFI 68

[Close]

BLAST of Cla97C02G036030 vs. TrEMBL
Match: tr|M5WWU7|M5WWU7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G004400 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 9.6e-06
Identity = 59/75 (78.67%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MGDCRPLGFLLGLPFALVAL XXXXXXXXXXXXXXXXXXXXXXXX  G+ANLAV L+KLP
Sbjct: 1  MGDCRPLGFLLGLPFALVALVXXXXXXXXXXXXXXXXXXXXXXXXVGGLANLAVTLIKLP 60

Query: 61 VKTTNFKIVAEDRFP 76
          VK   + I   D+ P
Sbjct: 61 VKIIRWFI---DKIP 72

[Close]

BLAST of Cla97C02G036030 vs. TrEMBL
Match: tr|A0A2I4HMT2|A0A2I4HMT2_9ROSI (uncharacterized protein LOC109019590 OS=Juglans regia OX=51240 GN=LOC109019590 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-05
Identity = 36/68 (52.94%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          M DCRPLGFLLGLPFALVAL                      XXX  G+AN+AVGLVKLP
Sbjct: 1  MEDCRPLGFLLGLPFALVALILSLVGAVIWIFGSVLSCLCPCXXXCTGLANMAVGLVKLP 60

Query: 61 VKTTNFKI 69
          VK   + I
Sbjct: 61 VKVLRWFI 68

[Close]

BLAST of Cla97C02G036030 vs. TrEMBL
Match: tr|A0A1R3GG06|A0A1R3GG06_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35520 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-05
Identity = 33/68 (48.53%), Postives = 35/68 (51.47%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MGDCRPLGFLLGLPFALVAL                           G+AN AV LVKLP
Sbjct: 1  MGDCRPLGFLLGLPFALVALVLPVVGATIWILGTILSCMCPCCICCAGLANFAVDLVKLP 60

Query: 61 VKTTNFKI 69
          VK   + I
Sbjct: 61 VKVLRWFI 68

[Close]

BLAST of Cla97C02G036030 vs. TrEMBL
Match: tr|A0A2P4H066|A0A2P4H066_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_05825 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.8e-05
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MGDCRPLGFLLGLPFALVA XXXXXXXXXXXXXXXXXXXXXXXXX  G+ANLA+G+VKLP
Sbjct: 1  MGDCRPLGFLLGLPFALVAXXXXXXXXXXXXXXXXXXXXXXXXXXFAGLANLAMGIVKLP 60

Query: 61 VKTTNFKI 69
          V+   + I
Sbjct: 61 VRVLRWFI 68

[Close]

BLAST of Cla97C02G036030 vs. TrEMBL
Match: tr|A0A0A0S3A8|A0A0A0S3A8_TAXBA (Taximin OS=Taxus baccata OX=25629 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.2e-05
Identity = 29/68 (42.65%), Postives = 37/68 (54.41%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MG+CRPLGFLLGLPFAL++L                           G+AN+AVGL+KLP
Sbjct: 1  MGECRPLGFLLGLPFALLSLVFAAVGAVVWILGTLLSCICPCCICFSGLANMAVGLMKLP 60

Query: 61 VKTTNFKI 69
          +K   + I
Sbjct: 61 LKIMRWSI 68

[Close]

BLAST of Cla97C02G036030 vs. TAIR10
Match: AT2G20562.1 (unknown protein)

HSP 1 Score: 45.1 bits (105), Expect = 2.3e-05
Identity = 42/62 (67.74%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 1  MGDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLP 60
          MGDCRPLGFL+GLPFA    XXXXXXXXXXXXXXXXXX          +AN AV L+KLP
Sbjct: 1  MGDCRPLGFLIGLPFAXXXXXXXXXXXXXXXXXXXXXXLCPCCFCFAALANFAVDLIKLP 60

Query: 61 VK 63
          +K
Sbjct: 61 IK 62

[Close]

BLAST of Cla97C02G036030 vs. TAIR10
Match: AT2G31090.1 (unknown protein)

HSP 1 Score: 42.7 bits (99), Expect = 1.1e-04
Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 2  GDCRPLGFLLGLPFALVALXXXXXXXXXXXXXXXXXXXXXXXXXXXGIANLAVGLVKLPV 61
          GDCRPLGFLLGLPFA ++L                   XXXXXXXX +  +A+GL+K P+
Sbjct: 4  GDCRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLLLSCIXXXXXXXXXLVEIAIGLIKAPI 63

The following BLAST results are available for this feature:

BLAST of Cla97C02G036030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_007210071.1	1.5e-05	78.67	uncharacterized protein LOC18776937 [Prunus persica] >ONI05381.1 hypothetical pr...	[more]
XP_008342914.1	1.9e-05	50.00	PREDICTED: uncharacterized protein LOC103405667 [Malus domestica] >XP_009342637....	[more]
XP_018857460.1	1.9e-05	52.94	PREDICTED: uncharacterized protein LOC109019590 [Juglans regia]	[more]
PQQ00988.1	1.9e-05	69.35	uncharacterized protein Pyn_16173 [Prunus yedoensis var. nudiflora] >PQQ05067.1 ...	[more]
OMO56991.1	2.5e-05	48.53	hypothetical protein COLO4_35520 [Corchorus olitorius]	[more]

BLAST of Cla97C02G036030 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|M5WWU7\|M5WWU7_PRUPE	9.6e-06	78.67	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G004400 PE=4 SV=1	[more]
tr\|A0A2I4HMT2\|A0A2I4HMT2_9ROSI	1.3e-05	52.94	uncharacterized protein LOC109019590 OS=Juglans regia OX=51240 GN=LOC109019590 P...	[more]
tr\|A0A1R3GG06\|A0A1R3GG06_9ROSI	1.6e-05	48.53	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35520 PE=4 SV=1	[more]
tr\|A0A2P4H066\|A0A2P4H066_QUESU	2.8e-05	82.35	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_05825 PE=4 SV=1	[more]
tr\|A0A0A0S3A8\|A0A0A0S3A8_TAXBA	6.2e-05	42.65	Taximin OS=Taxus baccata OX=25629 PE=2 SV=1	[more]

BLAST of Cla97C02G036030 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G036030 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20562.1	2.3e-05	67.74	unknown protein	[more]
AT2G31090.1	1.1e-04	48.33	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G036030.1	Cla97C02G036030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33834	FAMILY NOT NAMED	coord: 3..66

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G036030	Watermelon (97103) v2	wmbwmbB091
Cla97C02G036030	Silver-seed gourd	carwmbB0345
Cla97C02G036030	Silver-seed gourd	carwmbB0845
Cla97C02G036030	Cucumber (Gy14) v2	cgybwmbB111
Cla97C02G036030	Cucumber (Gy14) v1	cgywmbB098
Cla97C02G036030	Cucurbita maxima (Rimu)	cmawmbB575
Cla97C02G036030	Cucurbita maxima (Rimu)	cmawmbB631
Cla97C02G036030	Cucurbita moschata (Rifu)	cmowmbB511
Cla97C02G036030	Cucurbita moschata (Rifu)	cmowmbB560
Cla97C02G036030	Cucurbita moschata (Rifu)	cmowmbB604
Cla97C02G036030	Wild cucumber (PI 183967)	cpiwmbB118
Cla97C02G036030	Cucumber (Chinese Long) v3	cucwmbB122
Cla97C02G036030	Cucumber (Chinese Long) v2	cuwmbB116
Cla97C02G036030	Bottle gourd (USVL1VR-Ls)	lsiwmbB046
Cla97C02G036030	Melon (DHL92) v3.6.1	medwmbB103
Cla97C02G036030	Melon (DHL92) v3.5.1	mewmbB111
Cla97C02G036030	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G036030	Watermelon (Charleston Gray)	wcgwmbB148
Cla97C02G036030	Watermelon (97103) v1	wmwmbB318
Cla97C02G036030	Watermelon (97103) v1	wmwmbB333
Cla97C02G036030	Wax gourd	wgowmbB256
Cla97C02G036030	Wax gourd	wgowmbB355