Cla97C02G035930 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G035930
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	BPTI/Kunitz domain-containing protein 2-like isoform X2
Location	Cla97Chr02 : 14055677 .. 14057378 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCGAAAGCTGCTCTGTTTGTATGTCTATTGTTCGTCTCCGTTTTTGTTATAGCCTCGGCAGTATCGGAAGGAACTGAAGAGAAAGTTGAAGGTATTGTATTTAATTATATTGAAGCACACTCGAATTAGTCCATCTTAATTAAATATATAGAGATTACATGCACTACCTACGAAAAAAAAATATCTTAGAAGAAGGTCGTACAATGTGGCTAATTGTTTTGCACTCATTAAACATACCTCAAATTTATTTCCAATGTTGGGATAATATAATATGATTTATCTTTATCCATCGATTTATGTTTTTGGGTCAATCGGTTGTTAAACATAGTATAAAATCTAGATGTGAAGAAAGTATTAGATGATGTAGTATTAAATTACGTATCAAGTTTATGTTATGTTTTGGACTGATTCTAAAATTACTAAAATCGCTTTTGCTAATTTCAGAATCACTAAAAAAGAAAATGCTTTTAATTATTCAAAATCAAATTTAATAATATGAAAATTATGTTTAAAAGTGTAAAATCAAATATTTAATTGGATTGGAGTGATTAAAAATGTGTTTTGAAGTGATTTTAAATATGAGAAAATTGATTTTAATCATTTTAAAATCAATCCCAAGGATACATTAAGTCTTTGGGTCGATAAGTGATTTAATATTTAGAGATTATCATATTTATCTTCCAATAGTAATTGTGAGGCAGTCTTGTTGTGGCTGACTTATTTAATCATTTTTTTGTATATATGTAGATGTGTATGAGAGTTTTTTCCCCTTTAGAATGATATGTTGTGAAAAATCTCACTTCAACCCTAAGAATGAGCATAAAACAATTGAGAGATTAAAAGATAAAACACCAGAACTAAGAAATACAAAAAGAAAATTTAACCGAGTTAGCACATTAAACTTCATTATCTTTTTAACTGCAACAATTTGAGACTAAAATTTTAGGCTTAGACTATTGGTTAATTTCTTAAGCTCCTTCCAATCTAATGTTTTGCGAAAATCAAGCAGATATAGGCATCTTAATTTGTTGATGAGTAATTGTGAATGAACGTGTGCAGCTGAAAATGGAAATCCAGTGAAAGAATCAAAGCTGCGGTGCCGCTATGGATGCTGCCATTATTATGGGGGTGATTGCATCAAATGCTGTGGTAGTCCTCCAGAAGCAGCGCGGGCTACCAATCAAAATGGTTTCAACTCATATCATTTTCAACTTAAATCTATAACTACAACTATAGTACGTAATAATAAATGTGTATACAAAAAGGGGTTAAATTAAATGTTTAAAGTTTGAGTTCAATATATCACTATAATTAAAATGTCATTTTAATAATAGATTCTTCATCTTTAAACTTTAAAAGTATCTGATCAAAATTTGACAAATCTATTTGAATCTTTGATATAAAATTAAAATTTTGTATCTAAATTTTAAAAATATGATGTCAAGTATGTTAAAATACTTATTAAAAAGATTGATTGACATATTGACACAAATTTTGAAAAGTTGAAGAATTAAACTTTGAATTGCTTTAGAAATATTATGTGTTTTATTTTATGACAATATATATCTTTCTGACATGAAAGTCTCCTGATTTTTGTTTGGATCTCTACAACGCAGGAGATGAAGAGGGTGAAGTGGAGGCAAGTGGATTTGTTGGTGGCGGCAAAGGAGGCAAAGGTGGGAAAAAAGGGAAGTGA

mRNA sequence

ATGAAGTCGAAAGCTGCTCTGTTTGTATGTCTATTGTTCGTCTCCGTTTTTGTTATAGCCTCGGCAGTATCGGAAGGAACTGAAGAGAAAGTTGAAGCTGAAAATGGAAATCCAGTGAAAGAATCAAAGCTGCGGTGCCGCTATGGATGCTGCCATTATTATGGGGGTGATTGCATCAAATGCTGTGGTAGTCCTCCAGAAGCAGCGCGGGCTACCAATCAAAATGGAGATGAAGAGGGTGAAGTGGAGGCAAGTGGATTTGTTGGTGGCGGCAAAGGAGGCAAAGGTGGGAAAAAAGGGAAGTGA

Coding sequence (CDS)

ATGAAGTCGAAAGCTGCTCTGTTTGTATGTCTATTGTTCGTCTCCGTTTTTGTTATAGCCTCGGCAGTATCGGAAGGAACTGAAGAGAAAGTTGAAGCTGAAAATGGAAATCCAGTGAAAGAATCAAAGCTGCGGTGCCGCTATGGATGCTGCCATTATTATGGGGGTGATTGCATCAAATGCTGTGGTAGTCCTCCAGAAGCAGCGCGGGCTACCAATCAAAATGGAGATGAAGAGGGTGAAGTGGAGGCAAGTGGATTTGTTGGTGGCGGCAAAGGAGGCAAAGGTGGGAAAAAAGGGAAGTGA

Protein sequence

MKSKAALFVCLLFVSVFVIASAVSEGTEEKVEAENGNPVKESKLRCRYGCCHYYGGDCIKCCGSPPEAARATNQNGDEEGEVEASGFVGGGKGGKGGKKGK

Homology

[Close]

BLAST of Cla97C02G035930 vs. NCBI nr
Match: XP_022140567.1 (late embryogenesis abundant protein M17-like isoform X1 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 8.9e-19
Identity = 55/95 (57.89%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 1  MKSKAALFVCLLFVSVFVIASAVSEGTEE--KVEAENGNPVKESKLRCRYGCCHYYGGDC 60
          M+SKA  FVCLLF+S  VIASAVSEGT+E  +VE EN NPV+ESK RCRYGCC + G  C
Sbjct: 1  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVENENPVEESKQRCRYGCCRFDGRRC 60

Query: 61 IKCCGSPPE---AARATNQNGDEEGEVEASGFVGG 91
          ++CC  P E     +  N+N  EE EVE +GF  G
Sbjct: 61 VRCCRGPAEEEATIQNQNENTVEESEVETNGFGKG 95

[Close]

BLAST of Cla97C02G035930 vs. NCBI nr
Match: XP_022140624.1 (late embryogenesis abundant protein M17-like [Momordica charantia])

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12
Identity = 53/143 (37.06%), Postives = 66/143 (46.15%), Query Frame = 0


Query: 1   MKSKAALFVCLLFVSVFVIASAVSEGTEEK---VEAENGNPVKESKLRCRYGCCHYY--- 60
           M SK  LF CLLFVS  VIAS V+EGT+E+   VE ENGN V+ESK RCR+GCC ++   
Sbjct: 1   MTSKTILFACLLFVSAIVIASVVAEGTQEQHGTVEVENGNSVEESKQRCRFGCCGFHPIS 60

Query: 61  -------------------------------------------GGDCIKCCGSPPE---A 92
                                                      G  C++CC  P E    
Sbjct: 61  RRCISCCPRRPAEVQVTENQXXXXXXXXXXXXXXXXXXXXXXXGRRCVRCCRGPAEVEAT 120

[Close]

BLAST of Cla97C02G035930 vs. NCBI nr
Match: XP_022140569.1 (late embryogenesis abundant protein M17-like isoform X2 [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 6.2e-12
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1  MKSKAALFVCLLFVSVFVIASAVSEGTEE--KVEAENGNPVKESKLRCRYGCC--HYYGG 60
          M+SKA  FVCLLF+S  VIASAVSEGT+E  +VE E+GN +++SK RCR+GCC  + +  
Sbjct: 1  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVESGNSIEDSKQRCRHGCCVVNRHTL 60

Query: 61 DCIKCCGSPPEA-ARATNQN 76
           C++CC  P     +AT QN
Sbjct: 61 RCVRCCSRPRSVEVQATLQN 80

[Close]

BLAST of Cla97C02G035930 vs. NCBI nr
Match: XP_022140570.1 (late embryogenesis abundant protein M17-like isoform X3 [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 6.2e-12
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = 0


Query: 1  MKSKAALFVCLLFVSVFVIASAVSEGTEE--KVEAENGNPVKESKLRCRYGCC--HYYGG 60
          M+SKA  FVCLLF+S  VIASAVSEGT+E  +VE E+GN +++SK RCR+GCC  + +  
Sbjct: 1  MRSKAVAFVCLLFISTVVIASAVSEGTQEQNEVEVESGNSIEDSKQRCRHGCCVVNRHTL 60

Query: 61 DCIKCCGSPPEA-ARATNQN 76
           C++CC  P     +AT QN
Sbjct: 61 RCVRCCSRPRSVEVQATLQN 80

[Close]

BLAST of Cla97C02G035930 vs. NCBI nr
Match: XP_022140307.1 (uncharacterized protein LOC111011010 isoform X1 [Momordica charantia])

HSP 1 Score: 72.8 bits (177), Expect = 7.6e-10
Identity = 43/80 (53.75%), Postives = 54/80 (67.50%), Query Frame = 0


Query: 1  MKSKAALFVCLLFVSVFVIASAVSEGTEE--KVEAENGNPVKESKLRCRYG-CC--HYYG 60
          M+S A +F CLLF+S  VIASAVSEGT+E  +VE ENGN ++ESK RC  G CC  + + 
Sbjct: 1  MRSNAVVFGCLLFISTVVIASAVSEGTQEQHEVEVENGNSIEESKQRCPSGRCCVVNRFT 60

Query: 61 GDCIKCCGSPPEAARATNQN 76
          G C++CC    E   AT QN
Sbjct: 61 GRCVRCC-PRSEEVEATAQN 79

[Close]

BLAST of Cla97C02G035930 vs. TrEMBL
Match: tr|A0A1S3C295|A0A1S3C295_CUCME (BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.3e-09
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 0


Query: 1  MKSKAALFVCLLFVSVFVIASAVSEGTEEKVEAENG----NPVKESKLRCRYGCCHYYGG 60
          M SKA +F CLL +   V+A A +EG +E+ ++  G      V+ESK+RC +GCC YYG 
Sbjct: 1  MNSKAVVFACLLLLVSAVVAIA-AEGNQEQPQSAKGVNDKRGVEESKMRCYHGCCRYYGH 60

Query: 61 DCIKCCGSPPEAARA 72
          DC++CCGS  EA  A
Sbjct: 61 DCVRCCGSLAEAQDA 74

[Close]

BLAST of Cla97C02G035930 vs. TrEMBL
Match: tr|A0A1S4E0U4|A0A1S4E0U4_CUCME (CYC02 protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.8e-08
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 1  MKSKAALFVCLLFVSVFVIASAVSEGTEEKVEA------ENGNPVKESKLRCRYGCCHYY 60
          M SKA +F CLL +   V+A A +EG +E+ ++       +   V+ESK+RC +GCC YY
Sbjct: 1  MNSKAVVFACLLLLVSAVVAIA-AEGNQEQPQSAKATGVNDKRGVEESKMRCYHGCCRYY 60

Query: 61 GGDCIKCCGSPPEAARA 72
          G DC++CCGS  EA  A
Sbjct: 61 GHDCVRCCGSLAEAQDA 76

The following BLAST results are available for this feature:

BLAST of Cla97C02G035930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140567.1	8.9e-19	57.89	late embryogenesis abundant protein M17-like isoform X1 [Momordica charantia]	[more]
XP_022140624.1	4.7e-12	37.06	late embryogenesis abundant protein M17-like [Momordica charantia]	[more]
XP_022140569.1	6.2e-12	53.75	late embryogenesis abundant protein M17-like isoform X2 [Momordica charantia]	[more]
XP_022140570.1	6.2e-12	53.75	late embryogenesis abundant protein M17-like isoform X3 [Momordica charantia]	[more]
XP_022140307.1	7.6e-10	53.75	uncharacterized protein LOC111011010 isoform X1 [Momordica charantia]	[more]

BLAST of Cla97C02G035930 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C295\|A0A1S3C295_CUCME	3.3e-09	48.00	BPTI/Kunitz domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A1S4E0U4\|A0A1S4E0U4_CUCME	2.8e-08	45.45	CYC02 protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496043 PE=4 SV=1	[more]

BLAST of Cla97C02G035930 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G035930 vs. TAIR10


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G035930.1	Cla97C02G035930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..101

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G035930	Watermelon (97103) v2	wmbwmbB091
Cla97C02G035930	Silver-seed gourd	carwmbB0363
Cla97C02G035930	Silver-seed gourd	carwmbB0845
Cla97C02G035930	Cucumber (Gy14) v2	cgybwmbB111
Cla97C02G035930	Cucumber (Gy14) v1	cgywmbB098
Cla97C02G035930	Cucurbita maxima (Rimu)	cmawmbB631
Cla97C02G035930	Cucurbita moschata (Rifu)	cmowmbB511
Cla97C02G035930	Cucurbita moschata (Rifu)	cmowmbB560
Cla97C02G035930	Cucurbita moschata (Rifu)	cmowmbB604
Cla97C02G035930	Wild cucumber (PI 183967)	cpiwmbB118
Cla97C02G035930	Cucumber (Chinese Long) v3	cucwmbB122
Cla97C02G035930	Cucumber (Chinese Long) v2	cuwmbB116
Cla97C02G035930	Bottle gourd (USVL1VR-Ls)	lsiwmbB046
Cla97C02G035930	Melon (DHL92) v3.6.1	medwmbB103
Cla97C02G035930	Melon (DHL92) v3.5.1	mewmbB111
Cla97C02G035930	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G035930	Watermelon (Charleston Gray)	wcgwmbB148
Cla97C02G035930	Watermelon (97103) v1	wmwmbB318
Cla97C02G035930	Watermelon (97103) v1	wmwmbB333
Cla97C02G035930	Wax gourd	wgowmbB256
Cla97C02G035930	Wax gourd	wgowmbB355