Cla97C02G035910 (gene) Watermelon (97103) v2

Overview
NameCla97C02G035910
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionacanthoscurrin-1-like
LocationCla97Chr02 : 14031203 .. 14032265 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTCTAAAGGTTTTCTTTTTGTGTGTCTTCTTCTTGCGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACACAGCATACCCAAGAAGAGGAACAAGGTATATTCTAACTTTTTAATCATACACTACGCATGACTGTAGGGACAATGGATTAGCTGTACCTAATCCATGTAGTCTTTTCCTATACCTAGTATGAAAAAAATAAAATATATATATATATATTATTATTTATAACAAAGATTAATAATTAGAGCAATACAAATAATACAAATAATAAATCAAAAATATTTTAAAAAATAAGAATTATATACATAATGGTAAATTATGAATGAACAAAATAGTATCCATGCTCAGGATGCTTTCATGTTGCTTACATTGTTTATATTGTATGTTTTATGAATTTTTGTTAGGATACAATAGAAATATTTGTTTCAATAGTAATCATTACTTTTTCTATGTCCTCTTTATCCTATTTGATATTTTTCGCTTCCAGTGAATCTAGGCCATGATGTAGAAGAGTCTAAACATAGAGACAGCGGTGGTGGCAGCTATGGAGGATCTGGCGGAGGGTCTAGTGGAGGAGGGTCTGGCGGCAGTGGATCAGGGGGAGGTGGCTATGGCGGCGGTGGTGGCCATGGCGGAGGTGGGACTGGTAGTGGCGGCCAAGGCGGTGGAGGATCTGGCGGAGGCGGTCACGGAGGTGGCGGAGGGGGTCACGGCGGTGGAGGGTCTGGCGGAGGTGGCGGCTATGGAGGAGGAGGGAAAGGAGGAGGCGGGAAAGGCGGAGGAGGTAGTGGGTCGGGAGGAGGTGGTAAAGGCGGAGGAGGTGGAAAAGGCGGTGGAGGAAGTGGGTCAGGAGGAGGTGGGAAAGGCGGTGGAGGAGGTGGATATGGAGGAGGAGGAAGTGGGTCAGGTGGAGGCGGTAAAGGCGGAGGAGGAGGAGGAGGAGGGTACGAAGATAGCGAGTTCTCAAGAGGAGGCGGCGGAGGCTGGAAGGGAGGTGGCAGAGGAGGCGGTTGGAGAGGCGGTGGAGGAAGAGGAGGTGGCGGAAAGTGA

mRNA sequence

ATGAAGTCTAAAGGTTTTCTTTTTGTGTGTCTTCTTCTTGCGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACACAGCATACCCAAGAAGAGGAACAAGTGAATCTAGGCCATGATGTAGAAGAGTCTAAACATAGAGACAGCGGTGGTGGCAGCTATGGAGGATCTGGCGGAGGGTCTAGTGGAGGAGGGTCTGGCGGCAGTGGATCAGGGGGAGGTGGCTATGGCGGCGGTGGTGGCCATGGCGGAGGTGGGACTGGTAGTGGCGGCCAAGGCGGTGGAGGATCTGGCGGAGGCGGTCACGGAGGTGGCGGAGGGGGTCACGGCGGTGGAGGGTCTGGCGGAGGTGGCGGCTATGGAGGAGGAGGGAAAGGAGGAGGCGGGAAAGGCGGAGGAGGTAGTGGGTCGGGAGGAGGTGGTAAAGGCGGAGGAGGTGGAAAAGGCGGTGGAGGAAGTGGGTCAGGAGGAGGTGGGAAAGGCGGTGGAGGAGGTGGATATGGAGGAGGAGGAAGTGGGTCAGGTGGAGGCGGTAAAGGCGGAGGAGGAGGAGGAGGAGGGTACGAAGATAGCGAGTTCTCAAGAGGAGGCGGCGGAGGCTGGAAGGGAGGTGGCAGAGGAGGCGGTTGGAGAGGCGGTGGAGGAAGAGGAGGTGGCGGAAAGTGA

Coding sequence (CDS)

ATGAAGTCTAAAGGTTTTCTTTTTGTGTGTCTTCTTCTTGCGTCTGCTTTGGTTGTTTCGTGGGCTATAGAATCCCACACACAGCATACCCAAGAAGAGGAACAAGTGAATCTAGGCCATGATGTAGAAGAGTCTAAACATAGAGACAGCGGTGGTGGCAGCTATGGAGGATCTGGCGGAGGGTCTAGTGGAGGAGGGTCTGGCGGCAGTGGATCAGGGGGAGGTGGCTATGGCGGCGGTGGTGGCCATGGCGGAGGTGGGACTGGTAGTGGCGGCCAAGGCGGTGGAGGATCTGGCGGAGGCGGTCACGGAGGTGGCGGAGGGGGTCACGGCGGTGGAGGGTCTGGCGGAGGTGGCGGCTATGGAGGAGGAGGGAAAGGAGGAGGCGGGAAAGGCGGAGGAGGTAGTGGGTCGGGAGGAGGTGGTAAAGGCGGAGGAGGTGGAAAAGGCGGTGGAGGAAGTGGGTCAGGAGGAGGTGGGAAAGGCGGTGGAGGAGGTGGATATGGAGGAGGAGGAAGTGGGTCAGGTGGAGGCGGTAAAGGCGGAGGAGGAGGAGGAGGAGGGTACGAAGATAGCGAGTTCTCAAGAGGAGGCGGCGGAGGCTGGAAGGGAGGTGGCAGAGGAGGCGGTTGGAGAGGCGGTGGAGGAAGAGGAGGTGGCGGAAAGTGA

Protein sequence

MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVNLGHDVEESKHRDSGGGSYGGSGGGSSGGGSGGSGSGGGGYGGGGGHGGGGTGSGGQGGGGSGGGGHGGGGGGHGGGGSGGGGGYGGGGKGGGGKGGGGSGSGGGGKGGGGGKGGGGSGSGGGGKGGGGGGYGGGGSGSGGGGKGGGGGGGGYEDSEFSRGGGGGWKGGGRGGGWRGGGGRGGGGK
Homology
[Close]
BLAST of Cla97C02G035910 vs. NCBI nr
Match: XP_011650210.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-12
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0 

Query: 1   MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVNLGHDVEESKHRDSGGG 54
           MKSKGF+FVCLLL SALVVSWAIESHT+ TQ+E+QVNL HD+EE K+   GGG
Sbjct: 54  MKSKGFVFVCLLLVSALVVSWAIESHTESTQDEQQVNLAHDLEEPKYTHGGGG 106

[Close]
BLAST of Cla97C02G035910 vs. NCBI nr
Match: XP_011650209.1 (PREDICTED: glycine-rich protein DOT1-like [Cucumis sativus] >KGN63186.1 hypothetical protein Csa_2G407830 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 4.1e-08
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 0 

Query: 1  MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVNLGHDVEESKHRDSGGG 54
          MKSKGFLF CLLL SAL VSWA+ES TQ  Q ++QV   HDVEE+KHR   GG
Sbjct: 1  MKSKGFLFGCLLLVSALAVSWAVESRTQPIQHDQQV--AHDVEEAKHRSGSGG 51

[Close]
BLAST of Cla97C02G035910 vs. NCBI nr
Match: XP_016901857.1 (PREDICTED: acanthoscurrin-1-like [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 7.0e-08
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0 

Query: 1  MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVNLGHDVEESKHRDSGG 53
          MKSKGFLFVCLLL SAL VSWA+ES TQ  Q ++QV   HDVEE+KH+   G
Sbjct: 1  MKSKGFLFVCLLLVSALAVSWAVESRTQPIQNDQQV--AHDVEEAKHKGGSG 50

[Close]
BLAST of Cla97C02G035910 vs. NCBI nr
Match: XP_022140564.1 (acanthoscurrin-2-like isoform X1 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 0 

Query: 1  MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVN-LGHDVEESKH 48
          MKSKGFLF+CLLL SALV+SWAIESHT  T++E++VN +GH+ E+ KH
Sbjct: 1  MKSKGFLFLCLLLLSALVISWAIESHT--TKDEKEVNYVGHEAED-KH 45

[Close]
BLAST of Cla97C02G035910 vs. NCBI nr
Match: XP_022140565.1 (acanthoscurrin-2-like isoform X2 [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 0 

Query: 1  MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVN-LGHDVEESKH 48
          MKSKGFLF+CLLL SALV+SWAIESHT  T++E++VN +GH+ E+ KH
Sbjct: 1  MKSKGFLFLCLLLLSALVISWAIESHT--TKDEKEVNYVGHEAED-KH 45

[Close]
BLAST of Cla97C02G035910 vs. TrEMBL
Match: tr|A0A0A0LT28|A0A0A0LT28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G407830 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.7e-08
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 0 

Query: 1  MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVNLGHDVEESKHRDSGGG 54
          MKSKGFLF CLLL SAL VSWA+ES TQ  Q ++QV   HDVEE+KHR   GG
Sbjct: 1  MKSKGFLFGCLLLVSALAVSWAVESRTQPIQHDQQV--AHDVEEAKHRSGSGG 51

[Close]
BLAST of Cla97C02G035910 vs. TrEMBL
Match: tr|A0A1S4E0T9|A0A1S4E0T9_CUCME (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103496044 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.6e-08
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0 

Query: 1  MKSKGFLFVCLLLASALVVSWAIESHTQHTQEEEQVNLGHDVEESKHRDSGG 53
          MKSKGFLFVCLLL SAL VSWA+ES TQ  Q ++QV   HDVEE+KH+   G
Sbjct: 1  MKSKGFLFVCLLLVSALAVSWAVESRTQPIQNDQQV--AHDVEEAKHKGGSG 50

The following BLAST results are available for this feature:
BLAST of Cla97C02G035910 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011650210.11.6e-1275.47PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis sativus][more]
XP_011650209.14.1e-0867.92PREDICTED: glycine-rich protein DOT1-like [Cucumis sativus] >KGN63186.1 hypothet... [more]
XP_016901857.17.0e-0867.31PREDICTED: acanthoscurrin-1-like [Cucumis melo][more]
XP_022140564.11.1e-0568.75acanthoscurrin-2-like isoform X1 [Momordica charantia][more]
XP_022140565.11.1e-0568.75acanthoscurrin-2-like isoform X2 [Momordica charantia][more]
BLAST of Cla97C02G035910 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LT28|A0A0A0LT28_CUCSA2.7e-0867.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G407830 PE=4 SV=1[more]
tr|A0A1S4E0T9|A0A1S4E0T9_CUCME4.6e-0867.31acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103496044 PE=4 SV=1[more]
BLAST of Cla97C02G035910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G035910 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G035910.1Cla97C02G035910.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..222

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G035910Watermelon (97103) v2wmbwmbB091
Cla97C02G035910Silver-seed gourdcarwmbB0363
Cla97C02G035910Silver-seed gourdcarwmbB0845
Cla97C02G035910Cucumber (Gy14) v2cgybwmbB111
Cla97C02G035910Cucumber (Gy14) v1cgywmbB098
Cla97C02G035910Cucurbita maxima (Rimu)cmawmbB631
Cla97C02G035910Cucurbita moschata (Rifu)cmowmbB511
Cla97C02G035910Cucurbita moschata (Rifu)cmowmbB560
Cla97C02G035910Cucurbita moschata (Rifu)cmowmbB604
Cla97C02G035910Wild cucumber (PI 183967)cpiwmbB118
Cla97C02G035910Cucumber (Chinese Long) v3cucwmbB122
Cla97C02G035910Cucumber (Chinese Long) v2cuwmbB116
Cla97C02G035910Bottle gourd (USVL1VR-Ls)lsiwmbB046
Cla97C02G035910Melon (DHL92) v3.6.1medwmbB103
Cla97C02G035910Melon (DHL92) v3.5.1mewmbB111
Cla97C02G035910Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G035910Watermelon (Charleston Gray)wcgwmbB148
Cla97C02G035910Watermelon (97103) v1wmwmbB318
Cla97C02G035910Watermelon (97103) v1wmwmbB333
Cla97C02G035910Wax gourdwgowmbB256
Cla97C02G035910Wax gourdwgowmbB355