Cla97C02G034810 (gene) Watermelon (97103) v2

NameCla97C02G034810
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr02 : 9769954 .. 9770235 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGAGAGGAAGATTCAAAGGTTCATCAGGGGCCTACATGAGGAAATCAGAGGTGCGGTCGCCTTAAAGGAGCCAACGACCTTTGCGGCAGCGATTGGGGCCGCCCTGATCATGGACAAAAACACGACCAAGAAACCTCAAGCGACACACTCACGTTGGGAGGCCAGCACCTCATTTGGATTTAAAAGGAAGTCTCCCCCAGCCCCGTCAGATCAAACTTCCAAGGCCCACCGTCCAACCTCGGGACAAGCTACCACCCTCCCATTGTGCGGCTCATGA

mRNA sequence

ATGTTAGAGAGGAAGATTCAAAGGTTCATCAGGGGCCTACATGAGGAAATCAGAGGTGCGGTCGCCTTAAAGGAGCCAACGACCTTTGCGGCAGCGATTGGGGCCGCCCTGATCATGGACAAAAACACGACCAAGAAACCTCAAGCGACACACTCACGTTGGGAGGCCAGCACCTCATTTGGATTTAAAAGGAAGTCTCCCCCAGCCCCGTCAGATCAAACTTCCAAGGCCCACCGTCCAACCTCGGGACAAGCTACCACCCTCCCATTGTGCGGCTCATGA

Coding sequence (CDS)

ATGTTAGAGAGGAAGATTCAAAGGTTCATCAGGGGCCTACATGAGGAAATCAGAGGTGCGGTCGCCTTAAAGGAGCCAACGACCTTTGCGGCAGCGATTGGGGCCGCCCTGATCATGGACAAAAACACGACCAAGAAACCTCAAGCGACACACTCACGTTGGGAGGCCAGCACCTCATTTGGATTTAAAAGGAAGTCTCCCCCAGCCCCGTCAGATCAAACTTCCAAGGCCCACCGTCCAACCTCGGGACAAGCTACCACCCTCCCATTGTGCGGCTCATGA

Protein sequence

MLERKIQRFIRGLHEEIRGAVALKEPTTFAAAIGAALIMDKNTTKKPQATHSRWEASTSFGFKRKSPPAPSDQTSKAHRPTSGQATTLPLCGS
BLAST of Cla97C02G034810 vs. NCBI nr
Match: XP_022156992.1 (uncharacterized protein LOC111023821 [Momordica charantia])

HSP 1 Score: 63.9 bits (154), Expect = 3.2e-07
Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 0

Query: 5   KIQRFIRGLHEEIRGAVALKEPTTFAAAIGAALIMDKNTTKKPQATHSRWEASTSFGFKR 64
           KI +FI GLH EI+G + LKEPTT+AAA+  AL+MDK   ++PQ   S+    +S G KR
Sbjct: 215 KIDKFIDGLHREIKGLLVLKEPTTYAAAVRCALVMDK-CLEEPQ---SQQVMGSSSGVKR 274

Query: 65  KSPPAPSDQTSKAHRPTSGQATTLPLCGS 94
           K     S Q S+ H+    + T  P+C S
Sbjct: 275 KFASFSSSQPSRGHQHHVQRQTAPPVCPS 299

BLAST of Cla97C02G034810 vs. NCBI nr
Match: XP_022155925.1 (uncharacterized protein LOC111022925 [Momordica charantia])

HSP 1 Score: 63.5 bits (153), Expect = 4.2e-07
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 0

Query: 5   KIQRFIRGLHEEIRGAVALKEPTTFAAAIGAALIMDKNTTKKPQATHSRWEASTSFGFKR 64
           KI +FI GL  EI+G + LKEPTT+AAA+  AL+MDK   ++PQ   S+    +S G KR
Sbjct: 205 KIDKFIDGLRREIKGLLVLKEPTTYAAAVRCALVMDK-CLEEPQ---SQQVIGSSSGVKR 264

Query: 65  KSPPAPSDQTSKAHRPTSGQATTLPLCGS 94
           K     S Q S+ H+    + TT P C S
Sbjct: 265 KFASFSSSQPSRGHQHNGQRQTTPPACPS 289

BLAST of Cla97C02G034810 vs. NCBI nr
Match: XP_022131660.1 (uncharacterized protein LOC111004785 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 7.2e-07
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 0

Query: 5   KIQRFIRGLHEEIRGAVALKEPTTFAAAIGAALIMDKNTTKKPQATHSRWEASTSFGFKR 64
           KI +F+ GL  EI+G + LKEPTT+AAA+   L+MDK      +  HS+    +S G KR
Sbjct: 196 KIDKFVDGLRREIKGLLVLKEPTTYAAAVRCTLVMDKCL----EEPHSQQVTGSSSGVKR 255

Query: 65  KSPPAPSDQTSKAHRPTSGQATTLPLC 92
           K     S+Q+S+ H+    + T  P+C
Sbjct: 256 KFASFSSNQSSRGHQQLVQRQTASPVC 278

BLAST of Cla97C02G034810 vs. NCBI nr
Match: XP_022151688.1 (uncharacterized protein LOC111019603 [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0

Query: 4   RKIQRFIRGLHEEIRGAVALKEPTTFAAAIGAALIMDKNTTKKPQATHSRWEASTSFGFK 63
           RKI+RF+RGL + I+G + L+ PTT+A AI  AL+MDK+  +K Q    + +   S G K
Sbjct: 198 RKIKRFVRGLWKGIKGPIDLQRPTTYAEAIKGALVMDKDVIEKAQ---PQQKVGLSSGVK 257

Query: 64  RKSPPAPSDQTSK 77
           RK PP  S Q SK
Sbjct: 258 RKVPPISSSQPSK 267

BLAST of Cla97C02G034810 vs. NCBI nr
Match: XP_022156794.1 (uncharacterized protein LOC111023627 [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0

Query: 3  ERKIQRFIRGLHEEIRGAVALKEPTTFAAAIGAALIMDKNTTKKPQATHSRWEASTSFGF 62
          E+KI+RF++GL + IRG V L+ PTT+A AI   L+MDK+ T K Q  H   E  +S G 
Sbjct: 25 EKKIKRFVKGLRKGIRGQVNLQRPTTYAEAIWGVLVMDKDVTIKVQTPH---EIGSSLGV 84

Query: 63 KRKSPPAPSDQTSKA 78
          KRK+P    +Q  +A
Sbjct: 85 KRKTPTYFPNQPPRA 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156992.13.2e-0744.94uncharacterized protein LOC111023821 [Momordica charantia][more]
XP_022155925.14.2e-0744.94uncharacterized protein LOC111022925 [Momordica charantia][more]
XP_022131660.17.2e-0740.23uncharacterized protein LOC111004785 [Momordica charantia][more]
XP_022151688.11.6e-0647.95uncharacterized protein LOC111019603 [Momordica charantia][more]
XP_022156794.11.6e-0646.67uncharacterized protein LOC111023627 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G034810.1Cla97C02G034810.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..93

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G034810Cla006754Watermelon (97103) v1wmwmbB326
Cla97C02G034810ClCG02G008170Watermelon (Charleston Gray)wcgwmbB138
The following gene(s) are paralogous to this gene:

None