Cla97C02G034270 (gene) Watermelon (97103) v2

NameCla97C02G034270
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionBnaA03g53890D protein
LocationCla97Chr02 : 8421941 .. 8422180 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAAGATCAGAAGCTTTTGCTTAGCTTTTATTATGATTCTAATGACTATCCCAAACTTTGCCAATTTTGCCGATTGTCGACTGCTCCGATCGGAGGCCGAGAGCAACGGGGTTAAGGAACATGATGTTCACGAAAAGTCAAAAACCCTAACACCGCACCTGAAAGGTTCCAGCAGTAGAGTCGACCGAGTCTTCACGTTGGCTTCGGGACCGAGCAGGAAGGGCGCCGGCCATTAG

mRNA sequence

ATGTTCAAGATCAGAAGCTTTTGCTTAGCTTTTATTATGATTCTAATGACTATCCCAAACTTTGCCAATTTTGCCGATTGTCGACTGCTCCGATCGGAGGCCGAGAGCAACGGGGTTAAGGAACATGATGTTCACGAAAAGTCAAAAACCCTAACACCGCACCTGAAAGGTTCCAGCAGTAGAGTCGACCGAGTCTTCACGTTGGCTTCGGGACCGAGCAGGAAGGGCGCCGGCCATTAG

Coding sequence (CDS)

ATGTTCAAGATCAGAAGCTTTTGCTTAGCTTTTATTATGATTCTAATGACTATCCCAAACTTTGCCAATTTTGCCGATTGTCGACTGCTCCGATCGGAGGCCGAGAGCAACGGGGTTAAGGAACATGATGTTCACGAAAAGTCAAAAACCCTAACACCGCACCTGAAAGGTTCCAGCAGTAGAGTCGACCGAGTCTTCACGTTGGCTTCGGGACCGAGCAGGAAGGGCGCCGGCCATTAG

Protein sequence

MFKIRSFCLAFIMILMTIPNFANFADCRLLRSEAESNGVKEHDVHEKSKTLTPHLKGSSSRVDRVFTLASGPSRKGAGH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G034270.1Cla97C02G034270.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..60

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G034270MELO3C024718Melon (DHL92) v3.5.1mewmbB092
Cla97C02G034270ClCG02G007600Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G034270Lsi10G002340Bottle gourd (USVL1VR-Ls)lsiwmbB054
Cla97C02G034270MELO3C024718.2Melon (DHL92) v3.6.1medwmbB087
Cla97C02G034270CsaV3_2G036110Cucumber (Chinese Long) v3cucwmbB125
Cla97C02G034270Bhi10G001268Wax gourdwgowmbB370
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G034270Cucumber (Gy14) v2cgybwmbB116
Cla97C02G034270Cucumber (Gy14) v1cgywmbB459
Cla97C02G034270Cucurbita maxima (Rimu)cmawmbB571
Cla97C02G034270Cucurbita moschata (Rifu)cmowmbB547
Cla97C02G034270Wild cucumber (PI 183967)cpiwmbB121
Cla97C02G034270Cucumber (Chinese Long) v2cuwmbB119
Cla97C02G034270Watermelon (97103) v1wmwmbB317
Cla97C02G034270Watermelon (97103) v1wmwmbB326