Cla97C02G032070 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G032070
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Organ specific protein
Location	Cla97Chr02 : 5115944 .. 5116894 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGCCTTGTCTTCATCAATGTCTTATTGCTTGTGTTGGTAATTAATTAGCAATTCCATTCAAGTATTATCCATTTGATAAAAACTTTGTTATAAGTTTGAAGTGCATTTATTGCATGTGATTGTGATATGAGATTGATAGATTGAATTGTTATTGTGCATTTTAATCATATTTTCAGATCATCTAGTTGGATTGTTGTTCATAATATTCTAATTAATATTTTCTTTTCCTTTGCTCTTCTTTTGTGGGGAATTTAGTTTGCAATCACCATAGAATCAAGGCATGAGCCAGGAGAGCATCATTGGAGAAATTTGATCAACCACAAGTTGTTGTTTCATGAAGCAAATGAAGACCTTATCCGTTCGGATCCAAACTCACTTCTTTCCAAAAAAAAAATGGATGATTGCACTGAAAATTTGAAGGTTGAAGATGGAAAGCTTTTTGTTGAGCCTCGACCACAAGCCACATTTTATCGTGGTGTTGTCAAAGCTAAACTTTTTGCCAAAGATATAAAACCACGACTAGATAACACCAAAACAAAGCTTTTTGTTGAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCAAATGAGGATGTTAAAACAAAACTTTTTGTTGAAGATATCGAACCCCGACCAAATGTCTCATTTTATCCTGACGATGACACCAAAACAAAACTTTTTGTTAAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCAGATGACGACACCAAAACAAAGCTATTTGTTGAAGATATAGAACCACGACCAAATATCTCATTTTATCCAGATGACGACACTAAAACAAAGCTATTTGTTGAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCCGACAATCTCAAAGCCAAAGAGCACTCTGCTGATGATGCTCATCACCATGGGGAAGCTGACATACAAATGGTACAAGCTTAA

mRNA sequence

ATGAAGGGCCTTGTCTTCATCAATGTCTTATTGCTTGTGTTGTTTGCAATCACCATAGAATCAAGGCATGAGCCAGGAGAGCATCATTGGAGAAATTTGATCAACCACAAGTTGTTGTTTCATGAAGCAAATGAAGACCTTATCCGTTCGGATCCAAACTCACTTCTTTCCAAAAAAAAAATGGATGATTGCACTGAAAATTTGAAGGTTGAAGATGGAAAGCTTTTTGTTGAGCCTCGACCACAAGCCACATTTTATCGTGGTGTTGTCAAAGCTAAACTTTTTGCCAAAGATATAAAACCACGACTAGATAACACCAAAACAAAGCTTTTTGTTGAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCAAATGAGGATGTTAAAACAAAACTTTTTGTTGAAGATATCGAACCCCGACCAAATGTCTCATTTTATCCTGACGATGACACCAAAACAAAACTTTTTGTTAAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCAGATGACGACACCAAAACAAAGCTATTTGTTGAAGATATAGAACCACGACCAAATATCTCATTTTATCCAGATGACGACACTAAAACAAAGCTATTTGTTGAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCCGACAATCTCAAAGCCAAAGAGCACTCTGCTGATGATGCTCATCACCATGGGGAAGCTGACATACAAATGGTACAAGCTTAA

Coding sequence (CDS)

ATGAAGGGCCTTGTCTTCATCAATGTCTTATTGCTTGTGTTGTTTGCAATCACCATAGAATCAAGGCATGAGCCAGGAGAGCATCATTGGAGAAATTTGATCAACCACAAGTTGTTGTTTCATGAAGCAAATGAAGACCTTATCCGTTCGGATCCAAACTCACTTCTTTCCAAAAAAAAAATGGATGATTGCACTGAAAATTTGAAGGTTGAAGATGGAAAGCTTTTTGTTGAGCCTCGACCACAAGCCACATTTTATCGTGGTGTTGTCAAAGCTAAACTTTTTGCCAAAGATATAAAACCACGACTAGATAACACCAAAACAAAGCTTTTTGTTGAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCAAATGAGGATGTTAAAACAAAACTTTTTGTTGAAGATATCGAACCCCGACCAAATGTCTCATTTTATCCTGACGATGACACCAAAACAAAACTTTTTGTTAAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCAGATGACGACACCAAAACAAAGCTATTTGTTGAAGATATAGAACCACGACCAAATATCTCATTTTATCCAGATGACGACACTAAAACAAAGCTATTTGTTGAAGATGTAGAACCACGACCAAATGTCTCATTTTATCCCGACAATCTCAAAGCCAAAGAGCACTCTGCTGATGATGCTCATCACCATGGGGAAGCTGACATACAAATGGTACAAGCTTAA

Protein sequence

MKGLVFINVLLLVLFAITIESRHEPGEHHWRNLINHKLLFHEANEDLIRSDPNSLLSKKKMDDCTENLKVEDGKLFVEPRPQATFYRGVVKAKLFAKDIKPRLDNTKTKLFVEDVEPRPNVSFYPNEDVKTKLFVEDIEPRPNVSFYPDDDTKTKLFVKDVEPRPNVSFYPDDDTKTKLFVEDIEPRPNISFYPDDDTKTKLFVEDVEPRPNVSFYPDNLKAKEHSADDAHHHGEADIQMVQA

Homology

[Close]

BLAST of Cla97C02G032070 vs. NCBI nr
Match: XP_022952152.1 (organ-specific protein S2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-25
Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1  MKGLVFINVLLLVLFAITIESRHEPGEHHWRNLINHKLLFHEANEDLIRSDPNSLLSKKK 60
          MKGLVFIN  LL+L A TIESRHEPG+HHWRN I++KLL HE  E+ I SDPNSLLS+K+
Sbjct: 1  MKGLVFINFFLLILLANTIESRHEPGDHHWRNFIDNKLL-HEDIEEFIHSDPNSLLSEKE 60

Query: 61 MDDCTENLKVEDGKLFV---EPRPQATF 86
           +DCTE LK+EDGKLFV   EPRPQATF
Sbjct: 61 TEDCTETLKIEDGKLFVKNLEPRPQATF 87

[Close]

BLAST of Cla97C02G032070 vs. NCBI nr
Match: XP_022952153.1 (organ-specific protein S2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-25
Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 0


Query: 1  MKGLVFINVLLLVLFAITIESRHEPGEHHWRNLINHKLLFHEANEDLIRSDPNSLLSKKK 60
          MKGLVFIN  LL+L A TIESRHEPG+HHWRN I++KLL HE  E+ I SDPNSLLS+K+
Sbjct: 1  MKGLVFINFFLLILLANTIESRHEPGDHHWRNFIDNKLL-HEDIEEFIHSDPNSLLSEKE 60

Query: 61 MDDCTENLKVEDGKLFV---EPRPQATF 86
           +DCTE LK+EDGKLFV   EPRPQATF
Sbjct: 61 TEDCTETLKIEDGKLFVKNLEPRPQATF 87

[Close]

BLAST of Cla97C02G032070 vs. NCBI nr
Match: XP_023554805.1 (protein PELPK1-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.4 bits (311), Expect = 5.3e-25
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 1  MKGLVFINVLLLVLFAITIESRHEPGEHHWRNLINHKLLFHEANEDLIRSDPNSLLSKKK 60
          MKGLVFIN  LL+L A T++SR+EPG+HHWRN I++KLL HE  E+ I SDPNSLLS+K+
Sbjct: 1  MKGLVFINFFLLILLANTVKSRYEPGDHHWRNFIDNKLL-HEEIEEFIHSDPNSLLSEKE 60

Query: 61 MDDCTENLKVEDGKLFV---EPRPQATFYRGVV 91
           +DCTE LK+EDGKLFV   EPRPQATF   VV
Sbjct: 61 TEDCTETLKLEDGKLFVKNLEPRPQATFVSDVV 92

[Close]

BLAST of Cla97C02G032070 vs. NCBI nr
Match: XP_023554803.1 (protein PELPK1-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023554804.1 protein PELPK1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.4 bits (311), Expect = 5.3e-25
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 1  MKGLVFINVLLLVLFAITIESRHEPGEHHWRNLINHKLLFHEANEDLIRSDPNSLLSKKK 60
          MKGLVFIN  LL+L A T++SR+EPG+HHWRN I++KLL HE  E+ I SDPNSLLS+K+
Sbjct: 1  MKGLVFINFFLLILLANTVKSRYEPGDHHWRNFIDNKLL-HEEIEEFIHSDPNSLLSEKE 60

Query: 61 MDDCTENLKVEDGKLFV---EPRPQATFYRGVV 91
           +DCTE LK+EDGKLFV   EPRPQATF   VV
Sbjct: 61 TEDCTETLKLEDGKLFVKNLEPRPQATFVSDVV 92

[Close]

BLAST of Cla97C02G032070 vs. NCBI nr
Match: XP_023554802.1 (protein PELPK1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.4 bits (311), Expect = 5.3e-25
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 0


Query: 1  MKGLVFINVLLLVLFAITIESRHEPGEHHWRNLINHKLLFHEANEDLIRSDPNSLLSKKK 60
          MKGLVFIN  LL+L A T++SR+EPG+HHWRN I++KLL HE  E+ I SDPNSLLS+K+
Sbjct: 1  MKGLVFINFFLLILLANTVKSRYEPGDHHWRNFIDNKLL-HEEIEEFIHSDPNSLLSEKE 60

Query: 61 MDDCTENLKVEDGKLFV---EPRPQATFYRGVV 91
           +DCTE LK+EDGKLFV   EPRPQATF   VV
Sbjct: 61 TEDCTETLKLEDGKLFVKNLEPRPQATFVSDVV 92

[Close]

BLAST of Cla97C02G032070 vs. TrEMBL
Match: tr|A0A0A0K5Y0|A0A0A0K5Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259390 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 8.1e-22
Identity = 64/126 (50.79%), Postives = 76/126 (60.32%), Query Frame = 0


Query: 1   MKGLVFINVLLLVLFAITIESRHEPGEHHWRNLINHKLLFHEANEDLIRSDPNSLLSKKK 60
           MKGL+FINV LL LFA TIESRHEPG+HHWRNL+                       K K
Sbjct: 1   MKGLIFINVFLLALFAGTIESRHEPGDHHWRNLM-----------------------KDK 60

Query: 61  MDDCTENLKVEDGKLFVEPRPQATFYRGVVKAKLFAKDIKPRLDNTXXXXXXXXXXXXPN 120
           MDDCTE LKVEDGKLF+EPRPQATF+ G V+ K+ +KD++ R                P+
Sbjct: 61  MDDCTETLKVEDGKLFIEPRPQATFH-GDVQTKILSKDLEQR----------------PS 86

Query: 121 VSFYPN 127
           VSF P+
Sbjct: 121 VSFRPD 86

[Close]

BLAST of Cla97C02G032070 vs. TrEMBL
Match: tr|A0A1S3BHC5|A0A1S3BHC5_CUCME (uncharacterized protein LOC103489593 OS=Cucumis melo OX=3656 GN=LOC103489593 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-19
Identity = 59/99 (59.60%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 1  MKGLVFINVLLLVLFAITIESRHEPGEH-HWRNLINHKLLFHEANEDLIRSDPNSLLSKK 60
          MKGL FINV LL LFA TIESRHEPG H HWRNL+                       K 
Sbjct: 1  MKGLFFINVFLLALFADTIESRHEPGNHYHWRNLM-----------------------KD 60

Query: 61 KMDDCTENLKVEDGKLFVEPRPQATFYRGVVKAKLFAKD 99
          KMDDCTE LKVEDGKLFVEPRPQATF   VV  K+ +KD
Sbjct: 61 KMDDCTETLKVEDGKLFVEPRPQATFNGDVVMTKILSKD 76

The following BLAST results are available for this feature:

BLAST of Cla97C02G032070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952152.1	1.1e-25	72.73	organ-specific protein S2-like isoform X2 [Cucurbita moschata]	[more]
XP_022952153.1	1.1e-25	72.73	organ-specific protein S2-like isoform X3 [Cucurbita moschata]	[more]
XP_023554805.1	5.3e-25	67.74	protein PELPK1-like isoform X4 [Cucurbita pepo subsp. pepo]	[more]
XP_023554803.1	5.3e-25	67.74	protein PELPK1-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023554804.1 prot...	[more]
XP_023554802.1	5.3e-25	67.74	protein PELPK1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C02G032070 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5Y0\|A0A0A0K5Y0_CUCSA	8.1e-22	50.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259390 PE=4 SV=1	[more]
tr\|A0A1S3BHC5\|A0A1S3BHC5_CUCME	1.7e-19	59.60	uncharacterized protein LOC103489593 OS=Cucumis melo OX=3656 GN=LOC103489593 PE=...	[more]

BLAST of Cla97C02G032070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G032070 vs. TAIR10


Match Name	E-value	Identity	Description

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024489	Organ_specific_prot

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G032070.1	Cla97C02G032070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PFAM	PF10950	Organ_specific	coord: 24..147 e-value: 1.2E-10 score: 42.0 coord: 153..216 e-value: 3.6E-13 score: 50.1 coord: 106..170 e-value: 6.9E-14 score: 52.5
IPR024489	Organ specific protein	PRODOM	PD010796		coord: 111..216 e-value: 2.0E-5 score: 115.0
None	No IPR available	PANTHER	PTHR33731:SF1	SUBFAMILY NOT NAMED	coord: 177..225
None	No IPR available	PANTHER	PTHR33731	FAMILY NOT NAMED	coord: 4..177
None	No IPR available	PANTHER	PTHR33731:SF1	SUBFAMILY NOT NAMED	coord: 4..177
None	No IPR available	PANTHER	PTHR33731	FAMILY NOT NAMED	coord: 177..225

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G032070	Watermelon (97103) v2	wmbwmbB065
Cla97C02G032070	Silver-seed gourd	carwmbB0930
Cla97C02G032070	Cucumber (Gy14) v2	cgybwmbB117
Cla97C02G032070	Cucumber (Gy14) v2	cgybwmbB504
Cla97C02G032070	Cucumber (Gy14) v1	cgywmbB151
Cla97C02G032070	Cucumber (Gy14) v1	cgywmbB428
Cla97C02G032070	Cucurbita maxima (Rimu)	cmawmbB102
Cla97C02G032070	Cucurbita maxima (Rimu)	cmawmbB531
Cla97C02G032070	Cucurbita maxima (Rimu)	cmawmbB570
Cla97C02G032070	Cucurbita maxima (Rimu)	cmawmbB619
Cla97C02G032070	Cucurbita moschata (Rifu)	cmowmbB089
Cla97C02G032070	Cucurbita moschata (Rifu)	cmowmbB512
Cla97C02G032070	Cucurbita moschata (Rifu)	cmowmbB550
Cla97C02G032070	Cucurbita moschata (Rifu)	cmowmbB592
Cla97C02G032070	Wild cucumber (PI 183967)	cpiwmbB124
Cla97C02G032070	Wild cucumber (PI 183967)	cpiwmbB555
Cla97C02G032070	Cucumber (Chinese Long) v3	cucwmbB126
Cla97C02G032070	Cucumber (Chinese Long) v3	cucwmbB551
Cla97C02G032070	Cucumber (Chinese Long) v2	cuwmbB123
Cla97C02G032070	Cucumber (Chinese Long) v2	cuwmbB531
Cla97C02G032070	Bottle gourd (USVL1VR-Ls)	lsiwmbB056
Cla97C02G032070	Bottle gourd (USVL1VR-Ls)	lsiwmbB086
Cla97C02G032070	Melon (DHL92) v3.6.1	medwmbB165
Cla97C02G032070	Melon (DHL92) v3.5.1	mewmbB179
Cla97C02G032070	Watermelon (Charleston Gray)	wcgwmbB068
Cla97C02G032070	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G032070	Watermelon (97103) v1	wmwmbB317
Cla97C02G032070	Watermelon (97103) v1	wmwmbB367
Cla97C02G032070	Wax gourd	wgowmbB250
Cla97C02G032070	Wax gourd	wgowmbB356