Cla97C02G031910 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G031910
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	protein RADIALIS-like 1
Location	Cla97Chr02 : 4890521 .. 4890766 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCAAAACTCTACGAGATCGAGTCGTTGA

mRNA sequence

ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCAAAACTCTACGAGATCGAGTCGTTGA

Coding sequence (CDS)

ATGGCTTCAATGTCTGCACATGGGTCTAGTGCATGGACTCCAATGGAAAACAAAGCCTTTGAGAAAGCTTTGGCAGTTTATGATCAAGATACACCTGAAAGATGGCTCAATGTTGCAAAGGCCATTGGTGGCAAAACTGAAGAAGAAGTGAAGAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAGTCTGGTGAAATTCCTTTCCCCTATCAAAACTCTACGAGATCGAGTCGTTGA

Protein sequence

MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYQNSTRSSR

Homology

[Close]

BLAST of Cla97C02G031910 vs. NCBI nr
Match: XP_011658943.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis sativus] >KGN44073.1 hypothetical protein Csa_7G168060 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNSTRSSR 82
          V HIESG+IPFPY+ STRSSR
Sbjct: 61 VNHIESGQIPFPYRKSTRSSR 81

[Close]

BLAST of Cla97C02G031910 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 8.7e-33
Identity = 69/81 (85.19%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGS+ WT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEE+VKRHYQLL+ED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNSTRSSR 82
          V HIE+G+IPFPY+NSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]

BLAST of Cla97C02G031910 vs. NCBI nr
Match: XP_022952660.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-like 1 [Cucurbita moschata] >XP_023554744.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143.7 bits (361), Expect = 2.8e-31
Identity = 69/78 (88.46%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTPERW+NVAKAIGGKTE+EVKRHYQLLV+D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPERWVNVAKAIGGKTEDEVKRHYQLLVKD 60

Query: 61 VKHIESGEIPFPYQNSTR 79
          VKHIESGEI FPY++STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]

BLAST of Cla97C02G031910 vs. NCBI nr
Match: XP_022972544.1 (protein RADIALIS-like 1 [Cucurbita maxima] >XP_022972545.1 protein RADIALIS-like 1 [Cucurbita maxima])

HSP 1 Score: 142.1 bits (357), Expect = 8.2e-31
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT  ENKAFEKALAV+DQDTP+RW+NVAKAIGGKTE+EVKRHYQLLV D
Sbjct: 1  MASMSAHGSSAWTARENKAFEKALAVFDQDTPDRWVNVAKAIGGKTEDEVKRHYQLLVND 60

Query: 61 VKHIESGEIPFPYQNSTR 79
          VKHIESGEI FPY++STR
Sbjct: 61 VKHIESGEINFPYRSSTR 78

[Close]

BLAST of Cla97C02G031910 vs. NCBI nr
Match: XP_022952273.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30
Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMS+ GS+AWTPM+NKAFEKALAVYDQDTPERWLNVAKA+G KTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGEIPFPYQNST 78
          VKHIESG +PFPY+NS+
Sbjct: 61 VKHIESGNVPFPYRNSS 77

[Close]

BLAST of Cla97C02G031910 vs. TrEMBL
Match: tr|A0A0A0K3K0|A0A0A0K3K0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.8e-34
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGSSAWT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNSTRSSR 82
          V HIESG+IPFPY+ STRSSR
Sbjct: 61 VNHIESGQIPFPYRKSTRSSR 81

[Close]

BLAST of Cla97C02G031910 vs. TrEMBL
Match: tr|A0A1S3BGF0|A0A1S3BGF0_CUCME (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.8e-33
Identity = 69/81 (85.19%), Postives = 78/81 (96.30%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGS+ WT +ENKAFEKALA+YD+DTPERWLNVAKAIGGKTEE+VKRHYQLL+ED
Sbjct: 1  MASMSAHGSTQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNSTRSSR 82
          V HIE+G+IPFPY+NSTRSSR
Sbjct: 61 VNHIENGQIPFPYRNSTRSSR 81

[Close]

BLAST of Cla97C02G031910 vs. TrEMBL
Match: tr|A0A1S3BGF6|A0A1S3BGF6_CUCME (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 63/76 (82.89%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAHGS  WT  +NKAFEKALA+YD+DTP+RWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNS 77
          VKHIESG++PFPY+ S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of Cla97C02G031910 vs. TrEMBL
Match: tr|A0A0A0K344|A0A0A0K344_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.6e-29
Identity = 61/76 (80.26%), Postives = 72/76 (94.74%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS+SAHGS  WT  +NKAFE+ALA+YD+DTP+RWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGEIPFPYQNS 77
          VKHIESG++PFPY++S
Sbjct: 61 VKHIESGKVPFPYRSS 76

[Close]

BLAST of Cla97C02G031910 vs. TrEMBL
Match: tr|A0A1S3BHZ4|A0A1S3BHZ4_CUCME (protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103489762 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.3e-28
Identity = 60/77 (77.92%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMS+HGS+AWT M+NK FEKALA YDQDTPERW+NVAKA+G KTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGEIPFPYQNST 78
          VKHIESG +PFPY  ++
Sbjct: 61 VKHIESGNVPFPYPTTS 77

[Close]

BLAST of Cla97C02G031910 vs. Swiss-Prot
Match: sp|Q9SIJ5|RADL2_ARATH (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.3e-23
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 3  SMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVK 62
          SMS++GS +WT  +NKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGEIPFP-YQNSTRSS 81
           IE+G +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of Cla97C02G031910 vs. Swiss-Prot
Match: sp|F4JVB8|RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 7.3e-23
Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 2  ASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 61
          +SMS+  S +WT  +NKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGEIPFP 73
            IE+G +PFP
Sbjct: 64 NSIENGHVPFP 74

[Close]

BLAST of Cla97C02G031910 vs. Swiss-Prot
Match: sp|Q58FS3|RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-21
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS    G   W+  ENKAFE+ALAVYD+DTP+RW NVA+A+ G+T EEVK+HY++LVED
Sbjct: 1  MASTRGSG-RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 60

Query: 61 VKHIESGEIPFPYQNST 78
          +K+IESG++PFP   +T
Sbjct: 61 IKYIESGKVPFPNYRTT 76

[Close]

BLAST of Cla97C02G031910 vs. Swiss-Prot
Match: sp|Q6NNN0|RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.9e-21
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S   S++WT  ENK FE+ALA YDQDTP+RW NVA+A+GGK+ EEV+RHY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VKHIESGEIPFPYQNS 77
          V  IESG  P P   S
Sbjct: 61 VNDIESGRYPHPNYRS 76

[Close]

BLAST of Cla97C02G031910 vs. Swiss-Prot
Match: sp|Q1A173|RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 8.9e-21
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S    S WT  +NK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP-YQNSTRSSR 82
          + +IE+G +P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of Cla97C02G031910 vs. TAIR10
Match: AT2G21650.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 2.4e-24
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 3  SMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVK 62
          SMS++GS +WT  +NKAFE+ALAVYDQDTP+RW NVA+A+GGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGEIPFP-YQNSTRSS 81
           IE+G +PFP Y+ +T +S
Sbjct: 65 SIENGHVPFPDYKTTTGNS 83

[Close]

BLAST of Cla97C02G031910 vs. TAIR10
Match: AT4G39250.1 (RAD-like 1)

HSP 1 Score: 107.5 bits (267), Expect = 4.0e-24
Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 2  ASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 61
          +SMS+  S +WT  +NKAFE+ALA YDQDTP RW NVAK +GGKT EEVKRHY+LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGEIPFP 73
            IE+G +PFP
Sbjct: 64 NSIENGHVPFP 74

[Close]

BLAST of Cla97C02G031910 vs. TAIR10
Match: AT1G75250.1 (RAD-like 6)

HSP 1 Score: 100.5 bits (249), Expect = 4.9e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S    S WT  +NK FE+ALAVYD+DTP+RW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP-YQNSTRSSR 82
          + +IE+G +P P Y+    +SR
Sbjct: 61 LINIETGRVPLPNYKTFESNSR 82

[Close]

BLAST of Cla97C02G031910 vs. TAIR10
Match: AT1G19510.1 (RAD-like 5)

HSP 1 Score: 98.2 bits (243), Expect = 2.5e-21
Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S   SS+WT  +NK FE+ALAVYD+DTP+RW NVAKA+G K+ EEVKRHY +LVED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKHIESGEIPFP 73
          + +IE   +P P
Sbjct: 61 LMNIEQDLVPLP 72

[Close]

BLAST of Cla97C02G031910 vs. TAIR10
Match: AT2G18328.1 (RAD-like 4)

HSP 1 Score: 88.6 bits (218), Expect = 1.9e-18
Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 1  MASMSAHGSSAWTPMENKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S+  +S+WT  E+K FE ALA +D+DTP+RW  +A+A+GGK+ EEVKRHY+LL+ D
Sbjct: 1  MAS-SSMSTSSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRD 60

Query: 61 VKHIESGEIPFP-YQNS 77
          V  IESG  P P Y+N+
Sbjct: 61 VNDIESGRYPQPRYRNT 76

The following BLAST results are available for this feature:

BLAST of Cla97C02G031910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658943.1	1.0e-33	88.89	PREDICTED: protein RADIALIS-like 1 [Cucumis sativus] >KGN44073.1 hypothetical pr...	[more]
XP_008447026.1	8.7e-33	85.19	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
XP_022952660.1	2.8e-31	88.46	protein RADIALIS-like 1 [Cucurbita moschata] >XP_022952661.1 protein RADIALIS-li...	[more]
XP_022972544.1	8.2e-31	87.18	protein RADIALIS-like 1 [Cucurbita maxima] >XP_022972545.1 protein RADIALIS-like...	[more]
XP_022952273.1	1.8e-30	84.42	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-li...	[more]

BLAST of Cla97C02G031910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K3K0\|A0A0A0K3K0_CUCSA	6.8e-34	88.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1	[more]
tr\|A0A1S3BGF0\|A0A1S3BGF0_CUCME	5.8e-33	85.19	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1	[more]
tr\|A0A1S3BGF6\|A0A1S3BGF6_CUCME	1.7e-29	82.89	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]
tr\|A0A0A0K344\|A0A0A0K344_CUCSA	8.6e-29	80.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 SV=1	[more]
tr\|A0A1S3BHZ4\|A0A1S3BHZ4_CUCME	7.3e-28	77.92	protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103489762 PE=4 SV=1	[more]

BLAST of Cla97C02G031910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SIJ5\|RADL2_ARATH	4.3e-23	63.29	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
sp\|F4JVB8\|RADL1_ARATH	7.3e-23	66.20	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
sp\|Q58FS3\|RAD_ANTMA	1.8e-21	61.04	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
sp\|Q6NNN0\|RADL3_ARATH	8.9e-21	61.84	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
sp\|Q1A173\|RADL6_ARATH	8.9e-21	60.98	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]

BLAST of Cla97C02G031910 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21650.1	2.4e-24	63.29	Homeodomain-like superfamily protein	[more]
AT4G39250.1	4.0e-24	66.20	RAD-like 1	[more]
AT1G75250.1	4.9e-22	60.98	RAD-like 6	[more]
AT1G19510.1	2.5e-21	62.50	RAD-like 5	[more]
AT2G18328.1	1.9e-18	57.14	RAD-like 4	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G031910.1	Cla97C02G031910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 1.0E-8 score: 45.0
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 11..56 e-value: 4.1E-8 score: 33.2
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..58 e-value: 7.43347E-8 score: 43.333
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 4..71 e-value: 2.5E-22 score: 80.5
None	No IPR available	PANTHER	PTHR43952:SF14	PROTEIN RADIALIS-LIKE 1-RELATED	coord: 1..79
None	No IPR available	PANTHER	PTHR43952	FAMILY NOT NAMED	coord: 1..79
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 10..66

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G031910	Watermelon (97103) v2	wmbwmbB065
Cla97C02G031910	Silver-seed gourd	carwmbB0180
Cla97C02G031910	Silver-seed gourd	carwmbB0324
Cla97C02G031910	Silver-seed gourd	carwmbB0930
Cla97C02G031910	Cucumber (Gy14) v2	cgybwmbB117
Cla97C02G031910	Cucumber (Gy14) v2	cgybwmbB504
Cla97C02G031910	Cucumber (Gy14) v1	cgywmbB151
Cla97C02G031910	Cucumber (Gy14) v1	cgywmbB428
Cla97C02G031910	Cucurbita maxima (Rimu)	cmawmbB102
Cla97C02G031910	Cucurbita maxima (Rimu)	cmawmbB531
Cla97C02G031910	Cucurbita maxima (Rimu)	cmawmbB570
Cla97C02G031910	Cucurbita maxima (Rimu)	cmawmbB619
Cla97C02G031910	Cucurbita moschata (Rifu)	cmowmbB089
Cla97C02G031910	Cucurbita moschata (Rifu)	cmowmbB512
Cla97C02G031910	Cucurbita moschata (Rifu)	cmowmbB550
Cla97C02G031910	Cucurbita moschata (Rifu)	cmowmbB592
Cla97C02G031910	Wild cucumber (PI 183967)	cpiwmbB124
Cla97C02G031910	Wild cucumber (PI 183967)	cpiwmbB555
Cla97C02G031910	Cucumber (Chinese Long) v3	cucwmbB126
Cla97C02G031910	Cucumber (Chinese Long) v3	cucwmbB551
Cla97C02G031910	Cucumber (Chinese Long) v2	cuwmbB123
Cla97C02G031910	Bottle gourd (USVL1VR-Ls)	lsiwmbB056
Cla97C02G031910	Bottle gourd (USVL1VR-Ls)	lsiwmbB086
Cla97C02G031910	Melon (DHL92) v3.6.1	medwmbB105
Cla97C02G031910	Melon (DHL92) v3.6.1	medwmbB165
Cla97C02G031910	Melon (DHL92) v3.5.1	mewmbB113
Cla97C02G031910	Melon (DHL92) v3.5.1	mewmbB179
Cla97C02G031910	Watermelon (Charleston Gray)	wcgwmbB068
Cla97C02G031910	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G031910	Watermelon (97103) v1	wmwmbB317
Cla97C02G031910	Watermelon (97103) v1	wmwmbB367
Cla97C02G031910	Wax gourd	wgowmbB250
Cla97C02G031910	Wax gourd	wgowmbB356