Cla97C02G029870 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G029870
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	AT4g35320/F23E12_120
Location	Cla97Chr02 : 3008893 .. 3009354 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCCATTCCACGGCGGAGCTTTCTACCGACGCGGCCTCTCAGCGACGCACTCCCTGTCTCCCAGCCGGACTCCGCTCAAACCCTACGCCGAAGGCTCTCTTCCATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGGTACTTCCTGGTCGTTCCGCAGATCCAAATCCGTGTCGTCAATGCGCGATTTCACCGGTAGTTCTCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATTCTGTCTCGCAAAGCTGCCTTCGCTAGAGATCTGGAGATGAACGATGAAGAAACTAAAGCTCTTGGATCTAATTGCAGAGGTAGTTTCAAGCATCTTTTCTATAAGGTTAGGTCTGAATTCCGTAAACTGATTCGCTCTGATCGAGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTTCGATGATGGAGTGAAATCTTAG

mRNA sequence

ATGACTTCCATTCCACGGCGGAGCTTTCTACCGACGCGGCCTCTCAGCGACGCACTCCCTGTCTCCCAGCCGGACTCCGCTCAAACCCTACGCCGAAGGCTCTCTTCCATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGGTACTTCCTGGTCGTTCCGCAGATCCAAATCCGTGTCGTCAATGCGCGATTTCACCGGTAGTTCTCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATTCTGTCTCGCAAAGCTGCCTTCGCTAGAGATCTGGAGATGAACGATGAAGAAACTAAAGCTCTTGGATCTAATTGCAGAGGTAGTTTCAAGCATCTTTTCTATAAGGTTAGGTCTGAATTCCGTAAACTGATTCGCTCTGATCGAGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTTCGATGATGGAGTGAAATCTTAG

Coding sequence (CDS)

ATGACTTCCATTCCACGGCGGAGCTTTCTACCGACGCGGCCTCTCAGCGACGCACTCCCTGTCTCCCAGCCGGACTCCGCTCAAACCCTACGCCGAAGGCTCTCTTCCATTTCCTTCAAGATCCAGCCGATTTCTTCGCCTGGTACTTCCTGGTCGTTCCGCAGATCCAAATCCGTGTCGTCAATGCGCGATTTCACCGGTAGTTCTCTCCGGAAGTGGTGGGATTGGGGATGGTCCTGGATTCTGTCTCGCAAAGCTGCCTTCGCTAGAGATCTGGAGATGAACGATGAAGAAACTAAAGCTCTTGGATCTAATTGCAGAGGTAGTTTCAAGCATCTTTTCTATAAGGTTAGGTCTGAATTCCGTAAACTGATTCGCTCTGATCGAGTCGGTCTTCCTCAAACTTTCAAATACGATTCGGTTAATTACTCGAAGAATTTCGATGATGGAGTGAAATCTTAG

Protein sequence

MTSIPRRSFLPTRPLSDALPVSQPDSAQTLRRRLSSISFKIQPISSPGTSWSFRRSKSVSSMRDFTGSSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS

Homology

[Close]

BLAST of Cla97C02G029870 vs. NCBI nr
Match: XP_022928235.1 (uncharacterized protein LOC111435129 [Cucurbita moschata])

HSP 1 Score: 289.3 bits (739), Expect = 7.8e-75
Identity = 140/153 (91.50%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MTSIPRRSFLPTRPLSDALPVSQPDSAQTLRRRLSSISFKIQPISSPGTSWSFRRSKSVS 60
           MTSIPRRSFLPTRPL+DALPVSQPDS QTLRRRLSSISFKIQPISSP TSWSF RSKSVS
Sbjct: 1   MTSIPRRSFLPTRPLNDALPVSQPDSTQTLRRRLSSISFKIQPISSPVTSWSFHRSKSVS 60

Query: 61  SMRDFTGSSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSE 120
           S+RD TG SLRKWWDWGWSWILSRKAAFARDLEMNDEETK+L SNCRGSF+HLFYKVRSE
Sbjct: 61  SLRDHTGKSLRKWWDWGWSWILSRKAAFARDLEMNDEETKSLRSNCRGSFRHLFYKVRSE 120

Query: 121 FRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS 154
           FRKLIRSDRVGLPQTFKYDSVNYSKNFDDG+++
Sbjct: 121 FRKLIRSDRVGLPQTFKYDSVNYSKNFDDGIQT 153

[Close]

BLAST of Cla97C02G029870 vs. NCBI nr
Match: XP_022135907.1 (uncharacterized protein LOC111007745 [Momordica charantia])

HSP 1 Score: 281.2 bits (718), Expect = 2.1e-72
Identity = 134/153 (87.58%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MTSIPRRSFLPTRPLSDALPVSQPDSAQTLRRRLSSISFKIQPISSPGTSWSFRRSKSVS 60
           MT +PRRSFLPTRPL+DALPVS PDS QTLRRRLSSISFKIQPISSP TSW FRRSKSVS
Sbjct: 1   MTFVPRRSFLPTRPLNDALPVSHPDSDQTLRRRLSSISFKIQPISSPVTSWPFRRSKSVS 60

Query: 61  SMRDFTGSSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSE 120
           SMR+++GSSLRKWWDWGWSWILSRKA FA+DLE+ND+ETK+LGSNCRGS++HLFYKVRSE
Sbjct: 61  SMREYSGSSLRKWWDWGWSWILSRKAPFAKDLEINDDETKSLGSNCRGSWRHLFYKVRSE 120

Query: 121 FRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS 154
           FRKL+RSDRVGLPQTFKYDSVNYSKNFDDGVK+
Sbjct: 121 FRKLMRSDRVGLPQTFKYDSVNYSKNFDDGVKT 153

[Close]

BLAST of Cla97C02G029870 vs. NCBI nr
Match: KGN43358.1 (hypothetical protein Csa_7G027010 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-64
Identity = 136/163 (83.44%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MTSIPRRSFLPTRPLSDALPVSQPD--SAQTLRRRLSSISFKIQPISSPGTSWSFRRSKS 60
           MTSIP R FLPT PL+DALP+SQP   S QTLRRRLSSISFKI PISSP TSWSF RSKS
Sbjct: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60

Query: 61  VSSMRDFTGSSLRKWWDWGWSWILSRKAAFARDLEMND-----EETKALGS--NCRGS-- 120
           +SSMRDFT +SLRKWWDWGWSWILSRKAAFARDLEMND     E TKALGS  + RGS  
Sbjct: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRGSFK 120

Query: 121 FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 153
           FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
Sbjct: 121 FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 163

[Close]

BLAST of Cla97C02G029870 vs. NCBI nr
Match: XP_018829028.1 (PREDICTED: uncharacterized protein LOC108997284 [Juglans regia])

HSP 1 Score: 219.5 bits (558), Expect = 7.6e-54
Identity = 103/146 (70.55%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 7   RSFLPTRPLSDALPVSQPDS-AQTLRRRLSSISFKIQPISSPGTSWSFRRSKSVSSMRDF 66
           RSF+P  P   ALPVSQ DS  Q LRRRLSS+S KIQPI+SP TSW+FRRSKSVSSM ++
Sbjct: 11  RSFIPNMPTKQALPVSQADSQEQGLRRRLSSLSLKIQPITSPATSWAFRRSKSVSSMGEY 70

Query: 67  TGSSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSEFRKLI 126
            GSS+R+WWDWGWSWILSRK  FA+DLE+N+EE K LGS+ +GS++H+FYKVRSE RKL+
Sbjct: 71  AGSSIREWWDWGWSWILSRKPIFAKDLELNEEEAKMLGSHDKGSWRHVFYKVRSEIRKLV 130

Query: 127 RSDRVGLPQTFKYDSVNYSKNFDDGV 152
            SD VGLPQT++YDS NYS+NFDDG+
Sbjct: 131 GSDHVGLPQTYRYDSYNYSQNFDDGI 156

[Close]

BLAST of Cla97C02G029870 vs. NCBI nr
Match: XP_018841573.1 (PREDICTED: uncharacterized protein LOC109006665 [Juglans regia])

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 101/150 (67.33%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 3   SIPRRSFLPTRPLSDALPVSQPDSAQ-TLRRRLSSISFKIQPISSPGTSWSFRRSKSVSS 62
           S+  RSF+P  P + ALPVS+ DS +  LRRRLSS+S KIQPI+SP TSW+FRRSKS+SS
Sbjct: 7   SLQDRSFIPNMPTNQALPVSKVDSKEHGLRRRLSSLSLKIQPIASPATSWAFRRSKSLSS 66

Query: 63  MRDFTGSSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSEF 122
           M +  GSS+RKWWDWGWSWILSRK  FA DLEMN+EE+K LGS+ +GS+ H+FYKVR E 
Sbjct: 67  MGESAGSSVRKWWDWGWSWILSRKPIFAEDLEMNEEESKMLGSHSKGSWSHVFYKVRFEI 126

Query: 123 RKLIRSDRVGLPQTFKYDSVNYSKNFDDGV 152
           R+L+ S+RVGLPQT++YDS NYSKNF+DG+
Sbjct: 127 RRLVGSERVGLPQTYRYDSYNYSKNFEDGI 156

[Close]

BLAST of Cla97C02G029870 vs. TrEMBL
Match: tr|A0A0A0K1L8|A0A0A0K1L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027010 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.1e-64
Identity = 136/163 (83.44%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MTSIPRRSFLPTRPLSDALPVSQPD--SAQTLRRRLSSISFKIQPISSPGTSWSFRRSKS 60
           MTSIP R FLPT PL+DALP+SQP   S QTLRRRLSSISFKI PISSP TSWSF RSKS
Sbjct: 1   MTSIPGRRFLPTPPLNDALPLSQPHQYSTQTLRRRLSSISFKIHPISSPLTSWSFPRSKS 60

Query: 61  VSSMRDFTGSSLRKWWDWGWSWILSRKAAFARDLEMND-----EETKALGS--NCRGS-- 120
           +SSMRDFT +SLRKWWDWGWSWILSRKAAFARDLEMND     E TKALGS  + RGS  
Sbjct: 61  MSSMRDFTRTSLRKWWDWGWSWILSRKAAFARDLEMNDNDDHEETTKALGSTYSSRGSFK 120

Query: 121 FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 153
           FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK
Sbjct: 121 FKHLFYKVRSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVK 163

[Close]

BLAST of Cla97C02G029870 vs. TrEMBL
Match: tr|A0A2I4FBL9|A0A2I4FBL9_9ROSI (uncharacterized protein LOC108997284 OS=Juglans regia OX=51240 GN=LOC108997284 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.0e-54
Identity = 103/146 (70.55%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 7   RSFLPTRPLSDALPVSQPDS-AQTLRRRLSSISFKIQPISSPGTSWSFRRSKSVSSMRDF 66
           RSF+P  P   ALPVSQ DS  Q LRRRLSS+S KIQPI+SP TSW+FRRSKSVSSM ++
Sbjct: 11  RSFIPNMPTKQALPVSQADSQEQGLRRRLSSLSLKIQPITSPATSWAFRRSKSVSSMGEY 70

Query: 67  TGSSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSEFRKLI 126
            GSS+R+WWDWGWSWILSRK  FA+DLE+N+EE K LGS+ +GS++H+FYKVRSE RKL+
Sbjct: 71  AGSSIREWWDWGWSWILSRKPIFAKDLELNEEEAKMLGSHDKGSWRHVFYKVRSEIRKLV 130

Query: 127 RSDRVGLPQTFKYDSVNYSKNFDDGV 152
            SD VGLPQT++YDS NYS+NFDDG+
Sbjct: 131 GSDHVGLPQTYRYDSYNYSQNFDDGI 156

[Close]

BLAST of Cla97C02G029870 vs. TrEMBL
Match: tr|A0A2I4GCD4|A0A2I4GCD4_9ROSI (uncharacterized protein LOC109006665 OS=Juglans regia OX=51240 GN=LOC109006665 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.6e-52
Identity = 101/150 (67.33%), Postives = 125/150 (83.33%), Query Frame = 0


Query: 3   SIPRRSFLPTRPLSDALPVSQPDSAQ-TLRRRLSSISFKIQPISSPGTSWSFRRSKSVSS 62
           S+  RSF+P  P + ALPVS+ DS +  LRRRLSS+S KIQPI+SP TSW+FRRSKS+SS
Sbjct: 7   SLQDRSFIPNMPTNQALPVSKVDSKEHGLRRRLSSLSLKIQPIASPATSWAFRRSKSLSS 66

Query: 63  MRDFTGSSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSEF 122
           M +  GSS+RKWWDWGWSWILSRK  FA DLEMN+EE+K LGS+ +GS+ H+FYKVR E 
Sbjct: 67  MGESAGSSVRKWWDWGWSWILSRKPIFAEDLEMNEEESKMLGSHSKGSWSHVFYKVRFEI 126

Query: 123 RKLIRSDRVGLPQTFKYDSVNYSKNFDDGV 152
           R+L+ S+RVGLPQT++YDS NYSKNF+DG+
Sbjct: 127 RRLVGSERVGLPQTYRYDSYNYSKNFEDGI 156

[Close]

BLAST of Cla97C02G029870 vs. TrEMBL
Match: tr|A0A2P4L0U6|A0A2P4L0U6_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_65664 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50
Identity = 102/156 (65.38%), Postives = 129/156 (82.69%), Query Frame = 0


Query: 3   SIPRRSFLPTRPLS--DALPVSQPDSAQ---TLRRRLSSISFKIQPISSPGTSWSFRRSK 62
           S  +RS+LPT P S   ALPVSQ DS++   +LRRRLSS+S KIQPIS+P TSW+FRRSK
Sbjct: 7   SFQKRSYLPTMPTSTNQALPVSQSDSSKEQVSLRRRLSSLSLKIQPISAPATSWAFRRSK 66

Query: 63  SVSSMRDFTGSSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKV 122
           SVSSM ++ G+S++KWWDWG+SWILSRK  FA+DLEMN+EETK LG   +GS++H+FYKV
Sbjct: 67  SVSSMGEYAGTSIKKWWDWGFSWILSRKPIFAKDLEMNEEETKMLGPQNKGSWRHVFYKV 126

Query: 123 RSEFRKLIRSDRVGLPQTFKYDSVNYSKNFDDGVKS 154
           RSE RKL+ SD+V LPQT+KY S +YSKNFD+G ++
Sbjct: 127 RSEIRKLVGSDQVRLPQTYKYSSYDYSKNFDNGSRT 162

[Close]

BLAST of Cla97C02G029870 vs. TrEMBL
Match: tr|A0A2N9FP62|A0A2N9FP62_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16772 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.9e-49
Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 16  SDALPVSQPDSA----QTLRRRLSSISFKIQPISSPGTSWSFRRSKSVSSMRDFTGSSLR 75
           + ALPVSQPDS+    Q+LRRRLSS+SFKIQPISSP TSW+F RSKSVSSM ++ G+S+R
Sbjct: 5   NQALPVSQPDSSNSKQQSLRRRLSSLSFKIQPISSPATSWAFHRSKSVSSMGEYAGTSIR 64

Query: 76  KWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSEFRKLIRSDRVG 135
           KWWDWG SW+LSRK  FA DLEMN+EETK LG   +GS++H+F+KVRSE RKL+ SD V 
Sbjct: 65  KWWDWGCSWVLSRKPIFANDLEMNEEETKMLGPQNKGSWRHVFFKVRSEIRKLVGSDHVA 124

Query: 136 LPQTFKYDSVNYSKNFDDGVKS 154
           LPQT++Y S +YSKNFDDG+++
Sbjct: 125 LPQTYRYTSYDYSKNFDDGIRT 146

[Close]

BLAST of Cla97C02G029870 vs. TAIR10
Match: AT4G35320.1 (unknown protein)

HSP 1 Score: 112.8 bits (281), Expect = 1.8e-25
Identity = 64/132 (48.48%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 18  ALPVSQ-PDSAQT-------LRRRLSSISFKI--QPISSPGTSWSFRRSKSVSSMRDFTG 77
           +LPVSQ P++A T       +RRRLSS+S  +  QP +    +  F RSKSVS+M +  G
Sbjct: 15  SLPVSQRPNAAATADDEPGLIRRRLSSLSLNLSNQPAA---IAARFPRSKSVSAMGEQAG 74

Query: 78  SSLRKWWDWGWSWILSRKAAFARDLEMNDEETKALGSNCRGSFKHLFYKVRSEFRKLI-R 137
           SS+++WW+WGWSWILSRK  F RDLE+N +E K++GS  RGS  H+F+K+RS+ R  +  
Sbjct: 75  SSVKEWWEWGWSWILSRKPIFIRDLELNKDEAKSIGSQNRGSIMHVFFKLRSQIRNFMGP 134

Query: 138 SDRVGLPQTFKY 139
           S    LP + KY
Sbjct: 135 SSEDSLPLSCKY 143

[Close]

BLAST of Cla97C02G029870 vs. TAIR10
Match: AT2G17300.1 (unknown protein)

HSP 1 Score: 82.0 bits (201), Expect = 3.4e-16
Identity = 55/140 (39.29%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 1   MTSIPRRSFLPTRPLSDALPVSQPDSAQTLRRRLSSISFKIQPISSPGTSWSFRRSKSVS 60
           M+S   ++    +P S  +  +  D    LRRRLSS+S  +   + P T     RSKSVS
Sbjct: 1   MSSSIMKTLQIRKPTSLPISSTTTDEPGLLRRRLSSLSLNLSR-NQPST---VSRSKSVS 60

Query: 61  SMRDFTGSSLRKWWDWGWSWILSRK-AAFARDLEMNDEETK-ALGSNCRGSFKHLFYKVR 120
            M +  GSS+++WW+      L +K   F  DLE+N  ETK +LG+  RGSF H+F+K+R
Sbjct: 61  DMGEQGGSSVKEWWEXXXXXXLLKKLPIFFTDLEVNKNETKSSLGNQQRGSFIHVFFKLR 120

Query: 121 SEFRKLIRSDRVGLPQTFKY 139
           SE R+L+R     LP + K+
Sbjct: 121 SEIRRLLRPSSDSLPLSCKH 136

The following BLAST results are available for this feature:

BLAST of Cla97C02G029870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928235.1	7.8e-75	91.50	uncharacterized protein LOC111435129 [Cucurbita moschata]	[more]
XP_022135907.1	2.1e-72	87.58	uncharacterized protein LOC111007745 [Momordica charantia]	[more]
KGN43358.1	6.2e-64	83.44	hypothetical protein Csa_7G027010 [Cucumis sativus]	[more]
XP_018829028.1	7.6e-54	70.55	PREDICTED: uncharacterized protein LOC108997284 [Juglans regia]	[more]
XP_018841573.1	5.4e-52	67.33	PREDICTED: uncharacterized protein LOC109006665 [Juglans regia]	[more]

BLAST of Cla97C02G029870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K1L8\|A0A0A0K1L8_CUCSA	4.1e-64	83.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027010 PE=4 SV=1	[more]
tr\|A0A2I4FBL9\|A0A2I4FBL9_9ROSI	5.0e-54	70.55	uncharacterized protein LOC108997284 OS=Juglans regia OX=51240 GN=LOC108997284 P...	[more]
tr\|A0A2I4GCD4\|A0A2I4GCD4_9ROSI	3.6e-52	67.33	uncharacterized protein LOC109006665 OS=Juglans regia OX=51240 GN=LOC109006665 P...	[more]
tr\|A0A2P4L0U6\|A0A2P4L0U6_QUESU	1.5e-50	65.38	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_65664 PE=4 SV=1	[more]
tr\|A0A2N9FP62\|A0A2N9FP62_FAGSY	2.9e-49	67.61	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16772 PE=4 SV=1	[more]

BLAST of Cla97C02G029870 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G029870 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35320.1	1.8e-25	48.48	unknown protein	[more]
AT2G17300.1	3.4e-16	39.29	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0035235	ionotropic glutamate receptor signaling pathway
biological_process	GO:0006811	ion transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004970	ionotropic glutamate receptor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G029870.1	Cla97C02G029870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35714	FAMILY NOT NAMED	coord: 9..151
None	No IPR available	PANTHER	PTHR35714:SF1	SUBFAMILY NOT NAMED	coord: 9..151

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G029870	Cla015733	Watermelon (97103) v1	wmwmbB317
Cla97C02G029870	Csa6G117780	Cucumber (Chinese Long) v2	cuwmbB432
Cla97C02G029870	MELO3C015705	Melon (DHL92) v3.5.1	mewmbB181
Cla97C02G029870	MELO3C013487	Melon (DHL92) v3.5.1	mewmbB094
Cla97C02G029870	ClCG02G003320	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G029870	CSPI06G09610	Wild cucumber (PI 183967)	cpiwmbB456
Cla97C02G029870	Cucsa.099820	Cucumber (Gy14) v1	cgywmbB125
Cla97C02G029870	CmaCh11G013250	Cucurbita maxima (Rimu)	cmawmbB101
Cla97C02G029870	CmaCh02G003030	Cucurbita maxima (Rimu)	cmawmbB634
Cla97C02G029870	CmaCh20G007100	Cucurbita maxima (Rimu)	cmawmbB572
Cla97C02G029870	CmoCh20G007050	Cucurbita moschata (Rifu)	cmowmbB551
Cla97C02G029870	CmoCh11G017950	Cucurbita moschata (Rifu)	cmowmbB094
Cla97C02G029870	Lsi11G012990	Bottle gourd (USVL1VR-Ls)	lsiwmbB086
Cla97C02G029870	Lsi10G000050	Bottle gourd (USVL1VR-Ls)	lsiwmbB055
Cla97C02G029870	CsGy6G009690	Cucumber (Gy14) v2	cgybwmbB412
Cla97C02G029870	CsGy7G001880	Cucumber (Gy14) v2	cgybwmbB502
Cla97C02G029870	MELO3C013487.2	Melon (DHL92) v3.6.1	medwmbB090
Cla97C02G029870	MELO3C015705.2	Melon (DHL92) v3.6.1	medwmbB167
Cla97C02G029870	Carg16130	Silver-seed gourd	carwmbB0358
Cla97C02G029870	Carg18108	Silver-seed gourd	carwmbB1124
Cla97C02G029870	CsaV3_6G010060	Cucumber (Chinese Long) v3	cucwmbB450
Cla97C02G029870	CsaV3_7G002020	Cucumber (Chinese Long) v3	cucwmbB549
Cla97C02G029870	Bhi05G001346	Wax gourd	wgowmbB241

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G029870	Silver-seed gourd	carwmbB0202
Cla97C02G029870	Silver-seed gourd	carwmbB0892
Cla97C02G029870	Cucumber (Gy14) v1	cgywmbB180
Cla97C02G029870	Cucurbita maxima (Rimu)	cmawmbB531
Cla97C02G029870	Cucurbita moschata (Rifu)	cmowmbB512
Cla97C02G029870	Cucurbita moschata (Rifu)	cmowmbB608
Cla97C02G029870	Wild cucumber (PI 183967)	cpiwmbB553
Cla97C02G029870	Cucumber (Chinese Long) v2	cuwmbB529