Cla97C02G029050 (gene) Watermelon (97103) v2

Overview
NameCla97C02G029050
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPectin lyase-like superfamily protein, putative
LocationCla97Chr02 : 2398301 .. 2399271 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAGGGAAAGCAGGTTGTGAAAAGAATGATTGCCATGTAAAGAAAACATGTACCAAACTTCCCACGGTAAATTCTCTGATTATACATATTAGTTTCTTTCTTTTTGCCTTATATCATATATAATTTAACTCAAATAGTGTCTTTTTTTTTTTTTTTTAACTTTTCAGAATTTGAAATTCAATTTCGTCACCAATTCAATAGTGAAGGACATAACTTCCTTGGATAGTAAAAACTTCCATATCAATCTCTTTGGGTGCAAGAATTTTACTTTTCAACACGTCACAATTACTGCACCAGAAAATAGTCCCAATACCGATAGAATTCATATGAGTAGTTTAGAAGAGATTAACATTATGAACAGAAAAATCTCAACGAGAGATGATTGTGTGTATGTTAGAGACAACAACAAGAAAGTAACTATTACTGATATAACTTGCGGACTAGGACATGTTAGCATAGGAAGTTTAGGCAAGTACGCCAAGCAAAAAGACATGATAGTAGTTGTGGTGAAAACATGCAAATTAATCAATACTTCAAACGGTGTTAGGATCAAAACATGGTCAGTATCTGCTGGCGCATTCACAACCTCTGACATGCATTTTGAAGATATTGAAATGGTTAGCGTTAGTAATCCTGTTATTATAAATCAAGAACATTGTCCATGGAATCAATGCAACTAAAAGGTATATATTGGAATTAGTACTCCTACCTCATTTTAAAAGAAAAGTGCAAAGCCAAAGGTATATTTATGTCAATAATATGTTGTCTTTTTCTTTTCCTTTTTCTCGTATGTTTAGGTTTCATAAAAAACTAAGATCAGCAACGTGAGTTTAAAAACATTAGAGACACTTCTGCTACTTCCGTTGCAGTCAAACTTATTTGCAGCAAAAGTATAGCATAATATGTGAAGGTGTAGAAGTTGCTGATATTGACCTAACTTATAATGGAAGTGAACCCCACCATTAG

mRNA sequence

ATGGTCAAGGGAAAGCAGAATTTGAAATTCAATTTCGTCACCAATTCAATAGTGAAGGACATAACTTCCTTGGATAGTAAAAACTTCCATATCAATCTCTTTGGGTGCAAGAATTTTACTTTTCAACACGTCACAATTACTGCACCAGAAAATAGTCCCAATACCGATAGAATTCATATGAGTAGTTTAGAAGAGATTAACATTATGAACAGAAAAATCTCAACGAGAGATGATTGTGTGTATGTTAGAGACAACAACAAGAAAGTAACTATTACTGATATAACTTGCGGACTAGGACATGTTAGCATAGGAAGTTTAGGCAAGTACGCCAAGCAAAAAGACATGATAGTAGTTGTGGTGAAAACATGCAAATTAATCAATACTTCAAACGGTGTTAGGATCAAAACATGGTCAGTATCTGCTGGCGCATTCACAACCTCTGACATGCATTTTGAAGATATTGAAATGGTTAGCGTTAGTAATCCTAACATTGTCCATGGAATCAATGCAACTAAAAGGTATATATTGGAATTAGTACTCCTACCTCATTTTAAAAGAAAAGTGCAAAGCCAAAGGTTTCATAAAAAACTAAGATCAGCAACTCAAACTTATTTGCAGCAAAAGTATAGCATAATATGTGAAGGTGTAGAAGTTGCTGATATTGACCTAACTTATAATGGAAGTGAACCCCACCATTAG

Coding sequence (CDS)

ATGGTCAAGGGAAAGCAGAATTTGAAATTCAATTTCGTCACCAATTCAATAGTGAAGGACATAACTTCCTTGGATAGTAAAAACTTCCATATCAATCTCTTTGGGTGCAAGAATTTTACTTTTCAACACGTCACAATTACTGCACCAGAAAATAGTCCCAATACCGATAGAATTCATATGAGTAGTTTAGAAGAGATTAACATTATGAACAGAAAAATCTCAACGAGAGATGATTGTGTGTATGTTAGAGACAACAACAAGAAAGTAACTATTACTGATATAACTTGCGGACTAGGACATGTTAGCATAGGAAGTTTAGGCAAGTACGCCAAGCAAAAAGACATGATAGTAGTTGTGGTGAAAACATGCAAATTAATCAATACTTCAAACGGTGTTAGGATCAAAACATGGTCAGTATCTGCTGGCGCATTCACAACCTCTGACATGCATTTTGAAGATATTGAAATGGTTAGCGTTAGTAATCCTAACATTGTCCATGGAATCAATGCAACTAAAAGGTATATATTGGAATTAGTACTCCTACCTCATTTTAAAAGAAAAGTGCAAAGCCAAAGGTTTCATAAAAAACTAAGATCAGCAACTCAAACTTATTTGCAGCAAAAGTATAGCATAATATGTGAAGGTGTAGAAGTTGCTGATATTGACCTAACTTATAATGGAAGTGAACCCCACCATTAG

Protein sequence

MVKGKQNLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEINIMNRKISTRDDCVYVRDNNKKVTITDITCGLGHVSIGSLGKYAKQKDMIVVVVKTCKLINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFKRKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVADIDLTYNGSEPHH
Homology
[Close]
BLAST of Cla97C02G029050 vs. NCBI nr
Match: XP_011659697.1 (PREDICTED: exopolygalacturonase-like, partial [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 6.3e-68
Identity = 146/231 (63.20%), Postives = 172/231 (74.46%), Query Frame = 0 

Query: 6   QNLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEE 65
           QNLKF+F+TNSIVKDITSLDSKNFHINL GCKN TFQHVTI+APENSPNTD IH+SS E+
Sbjct: 2   QNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQ 61

Query: 66  INIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCK 125
           INI++ KIST DDCV V D+NK+VTIT++TCG GH +S+GSLGKY K+KD++ V VK CK
Sbjct: 62  INILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACK 121

Query: 126 LINTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVL 185
           LINT+NGVRIKTW  SAGAF  SDMHFEDIEM +VSNP I+       N   R +     
Sbjct: 122 LINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPS--- 181

Query: 186 LPHFKRKVQSQRFHKKLRSATQTYLQQKY----SIICEGVEVADIDLTYNG 228
               K K+    F K +R  + T +  K     SI CEGVEVADI+LTY+G
Sbjct: 182 ----KIKISKVSF-KNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG 224

[Close]
BLAST of Cla97C02G029050 vs. NCBI nr
Match: XP_022136075.1 (exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 255.8 bits (652), Expect = 1.5e-64
Identity = 140/232 (60.34%), Postives = 168/232 (72.41%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           +LKFNFVTNS+VKDITSLDSKNFHINL GCKN TFQHVTI+AP++SPNTD IH+SS E I
Sbjct: 154 SLKFNFVTNSVVKDITSLDSKNFHINLLGCKNVTFQHVTISAPDHSPNTDGIHISSSENI 213

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+N  I T DDC+ V D+N ++TI+D+TCG GH +SIGSLGKY+K+KD+I V VK CKL
Sbjct: 214 NILNTNIGTGDDCISVGDSNSQITISDVTCGPGHGISIGSLGKYSKEKDVIGVFVKKCKL 273

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLL 186
            +T+NGVRIKTW  SAGAF  SDMHFEDIEMV+VSNP I+       N   R +      
Sbjct: 274 TSTTNGVRIKTWPDSAGAFIASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPS---- 333

Query: 187 PHFKRKVQSQRFHKKLRSATQTYLQQKY----SIICEGVEVADIDLTYNGSE 230
              K K+    F K +R  + T +  K     S  CEGVEVADI+LTYNG +
Sbjct: 334 ---KIKISKVSF-KNIRGTSATPVAVKLVCSSSNPCEGVEVADINLTYNGKQ 377

[Close]
BLAST of Cla97C02G029050 vs. NCBI nr
Match: XP_016903689.1 (PREDICTED: exopolygalacturonase-like, partial [Cucumis melo])

HSP 1 Score: 254.2 bits (648), Expect = 4.2e-64
Identity = 141/232 (60.78%), Postives = 167/232 (71.98%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           NLK NFVTNSIVKDITSLDSKN+HINL GCKN TF HVTITAP NSPNTD IH+SS E+I
Sbjct: 101 NLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQI 160

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+N  I+T DDC+ V D NK+V I+D+TCG GH +SIGSLGKY+K+K+++ V VK CKL
Sbjct: 161 NILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKL 220

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLL 186
            +T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP I+       N   R +      
Sbjct: 221 TDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPS---- 280

Query: 187 PHFKRKVQSQRFHKKLRSATQTYLQQK----YSIICEGVEVADIDLTYNGSE 230
              K K+ +  F K +R  + T +  K     S  CEGVEVADIDLTY+GSE
Sbjct: 281 ---KIKISNVSF-KNIRGTSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSE 324

[Close]
BLAST of Cla97C02G029050 vs. NCBI nr
Match: XP_022157826.1 (exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 251.1 bits (640), Expect = 3.6e-63
Identity = 138/232 (59.48%), Postives = 167/232 (71.98%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           +LKFNFVTNSIVKDITSLDSKNFHIN+ GCKN TFQHVTITAP NSPNTD IH+   E I
Sbjct: 146 SLKFNFVTNSIVKDITSLDSKNFHINVLGCKNLTFQHVTITAPGNSPNTDGIHIGCSEGI 205

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+N KI+T DDC+ V D NK++TI+D+TCG GH ++IGSLGKY +++ +  V +K CKL
Sbjct: 206 NILNTKIATGDDCISVGDTNKQITISDVTCGPGHGIAIGSLGKYTREQGVEGVTIKKCKL 265

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLL 186
           I+T+NGVRIKTW  SAG+F  SDMHFEDIEMV+VSNP I+       N   R +      
Sbjct: 266 IDTTNGVRIKTWPDSAGSFGASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPS---- 325

Query: 187 PHFKRKVQSQRFHKKLRSATQTYLQQKY----SIICEGVEVADIDLTYNGSE 230
              K KV    F K ++  + T +  K     SI CEGVEVADIDLTY+GS+
Sbjct: 326 ---KIKVSKVSF-KNIKGTSATPVAVKLVCSKSIPCEGVEVADIDLTYSGSQ 369

[Close]
BLAST of Cla97C02G029050 vs. NCBI nr
Match: XP_011658677.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 6.1e-63
Identity = 134/228 (58.77%), Postives = 166/228 (72.81%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           N+KF+FVTNS+VKDITSLDSKNFH NL GCKN TFQ+VTI APENSPNTD IH+SS E I
Sbjct: 203 NVKFSFVTNSMVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVI 262

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI N +IST DDC+ V D+NK++TIT++TCG GH +SIGSLGKY K+K++  V VK+CKL
Sbjct: 263 NIFNTRISTGDDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKL 322

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFK 186
           INTSNGVRIKTW   A A+T SD+HFEDIEMV+VSNP I+           + +     K
Sbjct: 323 INTSNGVRIKTWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKI---PSK 382

Query: 187 RKVQSQRFHKKLRSATQTYLQQKY----SIICEGVEVADIDLTYNGSE 230
            K+ +  F K +R  + T++  K+       CEGVEV DIDL Y G++
Sbjct: 383 IKINNVSF-KNIRGTSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQ 426

[Close]
BLAST of Cla97C02G029050 vs. TrEMBL
Match: tr|A0A1S4E643|A0A1S4E643_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103504477 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.8e-64
Identity = 141/232 (60.78%), Postives = 167/232 (71.98%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           NLK NFVTNSIVKDITSLDSKN+HINL GCKN TF HVTITAP NSPNTD IH+SS E+I
Sbjct: 101 NLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQI 160

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+N  I+T DDC+ V D NK+V I+D+TCG GH +SIGSLGKY+K+K+++ V VK CKL
Sbjct: 161 NILNTNIATGDDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKL 220

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLL 186
            +T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP I+       N   R +      
Sbjct: 221 TDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPS---- 280

Query: 187 PHFKRKVQSQRFHKKLRSATQTYLQQK----YSIICEGVEVADIDLTYNGSE 230
              K K+ +  F K +R  + T +  K     S  CEGVEVADIDLTY+GSE
Sbjct: 281 ---KIKISNVSF-KNIRGTSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSE 324

[Close]
BLAST of Cla97C02G029050 vs. TrEMBL
Match: tr|A0A1S3B3X5|A0A1S3B3X5_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.9e-63
Identity = 137/232 (59.05%), Postives = 164/232 (70.69%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           NLK NF+TNSIVKDITSLDSKN+HINL GCKN TF HVTITAP +SPNTD IH+SS EEI
Sbjct: 146 NLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGDSPNTDGIHVSSSEEI 205

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+N  I+T DDC+ V D NK++ I+D+TCG GH +SIGSLGKY+K+K+++ V VK CKL
Sbjct: 206 NILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKL 265

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLL 186
            +T+NGVRIKTW  S G F  SDMHFEDIEMV+VSNP I+       N   R +      
Sbjct: 266 TSTTNGVRIKTWPDSVGTFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPS---- 325

Query: 187 PHFKRKVQSQRFHKKLRSATQTYLQQKY----SIICEGVEVADIDLTYNGSE 230
              K K+    F K +R  + T +  K     S  CE VEVADIDLTY+GSE
Sbjct: 326 ---KIKISKVSF-KNIRGTSATPVAVKIVCSKSNPCEEVEVADIDLTYSGSE 369

[Close]
BLAST of Cla97C02G029050 vs. TrEMBL
Match: tr|A0A0A0K6J6|A0A0A0K6J6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037450 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.4e-62
Identity = 121/160 (75.62%), Postives = 140/160 (87.50%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           NLKF+F+TNSIVKDITSLDSKNFHINL GCKN TFQHVTI+APENSPNTD IH+SS E+I
Sbjct: 74  NLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQI 133

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI++ KIST DDCV V D+NK+VTIT++TCG GH +S+GSLGKY K+KD++ V VK CKL
Sbjct: 134 NILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKL 193

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV 166
           INT+NGVRIKTW  SAGAF  SDMHFEDIEM +VSNP I+
Sbjct: 194 INTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVII 233

[Close]
BLAST of Cla97C02G029050 vs. TrEMBL
Match: tr|A0A1S3C129|A0A1S3C129_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495658 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.5e-62
Identity = 131/228 (57.46%), Postives = 168/228 (73.68%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           N++FNF+TNSIVKDITSLDSKNFHINL  CKN TFQ+VTI APE SPNTD IH+S+ EEI
Sbjct: 265 NVRFNFITNSIVKDITSLDSKNFHINLLSCKNVTFQNVTIIAPEKSPNTDGIHVSNSEEI 324

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+N KIST DDCV V D NK++TIT++TCG GH +SIGSLGKY  +K++  V VK+C L
Sbjct: 325 NILNTKISTGDDCVSVGDGNKQITITNVTCGPGHGISIGSLGKYTTEKEVAGVTVKSCNL 384

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFK 186
           INTSNGVRIK+W  SA A+T SD+HFEDIEMV+VSNP I+           + +     K
Sbjct: 385 INTSNGVRIKSWPDSAVAYTASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKKI---PSK 444

Query: 187 RKVQSQRFHKKLRSATQTYLQQKY----SIICEGVEVADIDLTYNGSE 230
            K+++  F K +R  + T++  K+     + C+ VEVADI+L+Y G++
Sbjct: 445 IKIRNVSF-KNIRGTSATFVAIKFICSKDLPCDDVEVADINLSYTGTQ 488

[Close]
BLAST of Cla97C02G029050 vs. TrEMBL
Match: tr|A0A1S3BN96|A0A1S3BN96_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.8e-61
Identity = 134/232 (57.76%), Postives = 160/232 (68.97%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           NLKFNFVTNSIVKDITSLDSKN+H NL  CKN TF HVTITAP NSPNTD IH+   E+I
Sbjct: 168 NLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQI 227

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+N  I+T DDC+ V  +NK++ I+D+TCG GH +SIGSLGKY  +K+++ V VK CKL
Sbjct: 228 NILNTNIATGDDCISVGSSNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCKL 287

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVH----GINATKRYILELVLL 186
             T+NGVRIKTW  SA AF  SDMHFEDIEMV+VSNP ++       N   R +      
Sbjct: 288 TGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPS---- 347

Query: 187 PHFKRKVQSQRFHKKLRSATQTYLQQK----YSIICEGVEVADIDLTYNGSE 230
              K K+    F K +R  + T +  K     S  CEGVEVADIDLTY+GSE
Sbjct: 348 ---KIKISKVSF-KNIRGTSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSE 391

[Close]
BLAST of Cla97C02G029050 vs. Swiss-Prot
Match: sp|Q40312|PGLR_MEDSA (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.0e-46
Identity = 98/227 (43.17%), Postives = 138/227 (60.79%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           N  FNFV NSIV+ +TS DSKNFH+ +FGCKN TF   TITAP +SPNTD IHM    ++
Sbjct: 149 NFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDV 208

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
            I+N  I T DDCV + D +K++T+  + CG GH +S+GSLGK+  ++++  + VK C L
Sbjct: 209 KILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTL 268

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV----HGINATKRYILELVLL 186
             T NGVRIKTW  + G  T SD+HFEDI M +V NP I+    +  N   +     + L
Sbjct: 269 TATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKL 328

Query: 187 PHFKRKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVADIDLTYNGS 229
                K+  +       +A    L    ++ C+GVE+ ++DL +NG+
Sbjct: 329 ----SKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGA 371

[Close]
BLAST of Cla97C02G029050 vs. Swiss-Prot
Match: sp|Q05967|PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.7e-45
Identity = 99/228 (43.42%), Postives = 137/228 (60.09%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           NL FN +TNS +KDIT+LDSK+FH+N+  CKN TF    ++AP NSPNTD IH+S    +
Sbjct: 143 NLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSV 202

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI +   ST DDC+ V D  +++ IT +TCG GH +S+GSLG    +K ++ V V+ C  
Sbjct: 203 NITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTF 262

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGI----NATKRYILELVLL 186
            NT NGVRIKTW  S      +D+HFEDI + +VSNP ++  +    N   + +   V +
Sbjct: 263 TNTDNGVRIKTWPASHPG-VVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKI 322

Query: 187 PHFKRKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVADIDLTYNGSE 230
                KV  Q      R+     L +   + CEG+EV DID+TY+G E
Sbjct: 323 ----SKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKE 365

[Close]
BLAST of Cla97C02G029050 vs. Swiss-Prot
Match: sp|Q39766|PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.2e-43
Identity = 98/230 (42.61%), Postives = 142/230 (61.74%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           N++F+FVTN++++DITS DSK FHIN+F CKN T + + I AP+ SPNTD IHM   E +
Sbjct: 151 NIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+   I T DDC+ + D  K + I +ITCG GH +SIGSLGK+  ++ +  + +  C +
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFK 186
            NTSNG RIKTW    G    S++HFEDI M +VS+P ++      ++Y        + +
Sbjct: 271 TNTSNGARIKTWPGEHGG-AVSEIHFEDITMNNVSSPILI-----DQQYCPWNKCKKNEE 330

Query: 187 RKVQ-SQRFHKKLRSATQTYLQQKY----SIICEGVEVADIDLTYNGSEP 231
            KV+ S    K +R  +      K+    S  C+ VE+ADID+ +NG+EP
Sbjct: 331 SKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAEP 374

[Close]
BLAST of Cla97C02G029050 vs. Swiss-Prot
Match: sp|P24548|PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42
Identity = 94/222 (42.34%), Postives = 132/222 (59.46%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           NL+   VTNSI++D+T+LDSKNFH+N+ GCKN TF+   I+A E S NTD IH+   + +
Sbjct: 109 NLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGV 168

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+N +I T DDC+ + D +K + IT+ITCG GH +S+GSLG+Y  ++ ++ + VK C +
Sbjct: 169 NIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTI 228

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFK 186
             + NGVRIKTW  S      S+MHF+DI M SV  P ++             V      
Sbjct: 229 TGSQNGVRIKTWPKSEPG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKL 288

Query: 187 RKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVADIDLTYNG 228
            K+  +       +     L    S  C GVE+ADIDLTY+G
Sbjct: 289 SKISFKNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSG 329

[Close]
BLAST of Cla97C02G029050 vs. Swiss-Prot
Match: sp|Q39786|PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-42
Identity = 97/230 (42.17%), Postives = 142/230 (61.74%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           N++F+F+TN++++DITS DSK FHIN+F CKN T + + I AP+ SPNTD IHM   E +
Sbjct: 151 NIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           NI+   I T DDC+ + D  K + I +ITCG GH +SIGSLGK+  ++ +  + +  C +
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFK 186
            NTSNG RIKTW    G    S++HFEDI M +VS+P ++      ++Y        + +
Sbjct: 271 TNTSNGARIKTWPGEHGG-AVSEIHFEDITMNNVSSPILI-----DQQYCPWNKCKKNEE 330

Query: 187 RKVQ-SQRFHKKLRSATQTYLQQKY----SIICEGVEVADIDLTYNGSEP 231
            KV+ S    K +R  +      K+    S  C+ VE+ADID+ +NG+EP
Sbjct: 331 SKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAEP 374

[Close]
BLAST of Cla97C02G029050 vs. TAIR10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43
Identity = 92/231 (39.83%), Postives = 142/231 (61.47%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           +++F+F+ NS ++DI+S+D+KNFHIN+ G KN T  ++ I APE+SPNTD IH+   + +
Sbjct: 140 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 199

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
            I+N  IST DDC+ V D  K + +  +TCG GH +S+GSLG+Y  ++D+  + V  C L
Sbjct: 200 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 259

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILEL 186
             T NG+RIKTW  +A + T SD+HFEDI +  VSNP ++       +  N  K   ++L
Sbjct: 260 QETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKL 319

Query: 187 VLLPHFKRKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVADIDLTYNGSE 230
           V +       ++ R     + A +    + Y   C+ VE+ DID+ YNG++
Sbjct: 320 VNI-----SFKNIRGTSGNKDAVKLLCSKGYP--CQNVEIGDIDIKYNGAD 363

[Close]
BLAST of Cla97C02G029050 vs. TAIR10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 90/231 (38.96%), Postives = 143/231 (61.90%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           +++F+FVTN+ ++DI+S+D+KNFHIN+ G KN TF +V I AP  SPNTD IH+     +
Sbjct: 141 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 200

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
           +I+N +IST DDCV V D    + + ++ CG GH +S+GSLG+Y  ++D+  + V  C L
Sbjct: 201 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 260

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILEL 186
             T NG+RIKTW  +A + T S++HFE+I + +VSNP ++       +  N  K   ++L
Sbjct: 261 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKL 320

Query: 187 VLLPHFKRKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVADIDLTYNGSE 230
             +    R+++    +K    A +    + Y   CE V+V DI++ Y G++
Sbjct: 321 ANISF--RRIRGTSGNK---DAVKLLCSKGYP--CENVQVGDINIQYTGAD 364

[Close]
BLAST of Cla97C02G029050 vs. TAIR10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 162.9 bits (411), Expect = 2.3e-40
Identity = 88/231 (38.10%), Postives = 140/231 (60.61%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           +++F+FV N+ ++DI+S+D+KNFHIN+ G KN TF +V + AP  SPNTD IH+   E +
Sbjct: 141 SIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGV 200

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
            I+N KI+T DDC+ V D  K + + ++ CG GH +S+GSLG+Y  ++D+  + V  C L
Sbjct: 201 KILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTL 260

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILEL 186
             T NG+RIKTW  +A A T S +HFE+I + +VSNP ++       +  N  K   ++L
Sbjct: 261 QGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKL 320

Query: 187 VLLPHFKRKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVADIDLTYNGSE 230
           V +       ++ R     + A +    + +   C  VE+ +I+L Y G++
Sbjct: 321 VDI-----SFKNIRGTSGNKDAVKLLCSKAHP--CANVEIGNINLEYKGAD 364

[Close]
BLAST of Cla97C02G029050 vs. TAIR10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 3.0e-40
Identity = 91/231 (39.39%), Postives = 140/231 (60.61%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           +++F+FVT++ ++ ITSLD+K+FHIN+ G KN TF+ V I AP  SPNTD IH+   + I
Sbjct: 140 SIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGI 199

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
            I+N  IST DDCV V D  K + +  +TCG GH +SIGSLG+Y+ ++++  + +  C L
Sbjct: 200 KIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTL 259

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIV-------HGINATKRYILEL 186
             T NG+RIKTW  +A   T SD+HFE+I + +VSNP ++       +  N  K   ++L
Sbjct: 260 QETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKL 319

Query: 187 VLLPHFKRKVQSQRFHKKLRSATQTYLQQKYSIICEGVEVADIDLTYNGSE 230
             +   K +  S       + A +    + Y   C+ VEV D+++ Y G++
Sbjct: 320 ANISFKKIRGTSGN-----KDAVKLLCSKGYP--CQNVEVGDVNIQYTGAD 363

[Close]
BLAST of Cla97C02G029050 vs. TAIR10
Match: AT2G26620.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 144.4 bits (363), Expect = 8.5e-35
Identity = 90/229 (39.30%), Postives = 122/229 (53.28%), Query Frame = 0 

Query: 7   NLKFNFVTNSIVKDITSLDSKNFHINLFGCKNFTFQHVTITAPENSPNTDRIHMSSLEEI 66
           ++ F FV NS +KDITSL+SK  H N F   +F    VTITAP +SPNTD I M S   I
Sbjct: 153 SMGFAFVNNSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGSCSNI 212

Query: 67  NIMNRKISTRDDCVYVRDNNKKVTITDITCGLGH-VSIGSLGKYAKQKDMIVVVVKTCKL 126
            I N  I T DDC+ +     K+ I++I CG GH +S+GSLGK   +KD+  + V+    
Sbjct: 213 QISNTNIGTGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVRDVIF 272

Query: 127 INTSNGVRIKTWSVSAGAFTTSDMHFEDIEMVSVSNPNIVHGINATKRYILELVLLPHFK 186
             TS+G+RIKTW  SA     S+  +E+I+M+ V  P     IN  ++Y          K
Sbjct: 273 NGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKP-----INIDQKYCPHPPCEHERK 332

Query: 187 RKVQSQRFHKK-----LRSATQTYLQQKYSIICEGVEVADIDLTYNGSE 230
             VQ Q    K      ++     LQ   S  C+ VE+ DI++  NG E
Sbjct: 333 SHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNGLE 376

The following BLAST results are available for this feature:
BLAST of Cla97C02G029050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659697.16.3e-6863.20PREDICTED: exopolygalacturonase-like, partial [Cucumis sativus][more]
XP_022136075.11.5e-6460.34exopolygalacturonase-like [Momordica charantia][more]
XP_016903689.14.2e-6460.78PREDICTED: exopolygalacturonase-like, partial [Cucumis melo][more]
XP_022157826.13.6e-6359.48exopolygalacturonase-like [Momordica charantia][more]
XP_011658677.16.1e-6358.77PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
BLAST of Cla97C02G029050 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E643|A0A1S4E643_CUCME2.8e-6460.78exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103504477 PE=3 SV=1[more]
tr|A0A1S3B3X5|A0A1S3B3X5_CUCME6.9e-6359.05exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1[more]
tr|A0A0A0K6J6|A0A0A0K6J6_CUCSA3.4e-6275.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037450 PE=3 SV=1[more]
tr|A0A1S3C129|A0A1S3C129_CUCME4.5e-6257.46exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495658 PE=3 SV=1[more]
tr|A0A1S3BN96|A0A1S3BN96_CUCME3.8e-6157.76exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1[more]
BLAST of Cla97C02G029050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q40312|PGLR_MEDSA6.0e-4643.17Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1[more]
sp|Q05967|PGLR_TOBAC8.7e-4543.42Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1[more]
sp|Q39766|PGLR_GOSBA6.2e-4342.61Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1[more]
sp|P24548|PGLR_OENOR1.1e-4242.34Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1[more]
sp|Q39786|PGLR_GOSHI1.4e-4242.17Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1[more]
BLAST of Cla97C02G029050 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G07820.11.3e-4339.83Pectin lyase-like superfamily protein[more]
AT3G07830.11.0e-4038.96Pectin lyase-like superfamily protein[more]
AT3G07840.12.3e-4038.10Pectin lyase-like superfamily protein[more]
AT5G48140.13.0e-4039.39Pectin lyase-like superfamily protein[more]
AT2G26620.18.5e-3539.30Pectin lyase-like superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR000743Glyco_hydro_28
IPR012334Pectin_lyas_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0008152 metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016798 hydrolase activity, acting on glycosyl bonds
molecular_function GO:0016829 lyase activity
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G029050.1Cla97C02G029050.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 2..232
e-value: 1.2E-41
score: 145.1
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 7..227
e-value: 1.7E-44
score: 152.1
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 6..229
NoneNo IPR availablePANTHERPTHR31375:SF37PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 6..229
IPR011050Pectin lyase fold/virulence factorSUPERFAMILYSSF51126Pectin lyase-likecoord: 7..172

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G029050Watermelon (97103) v2wmbwmbB091
Cla97C02G029050Silver-seed gourdcarwmbB0202
Cla97C02G029050Silver-seed gourdcarwmbB0358
Cla97C02G029050Silver-seed gourdcarwmbB1124
Cla97C02G029050Cucumber (Gy14) v2cgybwmbB412
Cla97C02G029050Cucumber (Gy14) v2cgybwmbB500
Cla97C02G029050Cucumber (Gy14) v2cgybwmbB502
Cla97C02G029050Cucumber (Gy14) v1cgywmbB125
Cla97C02G029050Cucumber (Gy14) v1cgywmbB180
Cla97C02G029050Cucurbita maxima (Rimu)cmawmbB101
Cla97C02G029050Cucurbita maxima (Rimu)cmawmbB531
Cla97C02G029050Cucurbita maxima (Rimu)cmawmbB572
Cla97C02G029050Cucurbita moschata (Rifu)cmowmbB094
Cla97C02G029050Cucurbita moschata (Rifu)cmowmbB512
Cla97C02G029050Wild cucumber (PI 183967)cpiwmbB456
Cla97C02G029050Wild cucumber (PI 183967)cpiwmbB552
Cla97C02G029050Wild cucumber (PI 183967)cpiwmbB553
Cla97C02G029050Cucumber (Chinese Long) v3cucwmbB450
Cla97C02G029050Cucumber (Chinese Long) v3cucwmbB548
Cla97C02G029050Cucumber (Chinese Long) v3cucwmbB549
Cla97C02G029050Cucumber (Chinese Long) v2cuwmbB527
Cla97C02G029050Cucumber (Chinese Long) v2cuwmbB529
Cla97C02G029050Bottle gourd (USVL1VR-Ls)lsiwmbB055
Cla97C02G029050Bottle gourd (USVL1VR-Ls)lsiwmbB086
Cla97C02G029050Melon (DHL92) v3.6.1medwmbB090
Cla97C02G029050Melon (DHL92) v3.6.1medwmbB164
Cla97C02G029050Melon (DHL92) v3.5.1mewmbB094
Cla97C02G029050Melon (DHL92) v3.5.1mewmbB178
Cla97C02G029050Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G029050Watermelon (Charleston Gray)wcgwmbB149
Cla97C02G029050Watermelon (Charleston Gray)wcgwmbB150
Cla97C02G029050Watermelon (97103) v1wmwmbB317
Cla97C02G029050Wax gourdwgowmbB241
Cla97C02G029050Wax gourdwgowmbB376