Cla97C02G028890 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G028890
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Calcium-binding EF-hand family protein
Location	Cla97Chr02 : 2292408 .. 2292824 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGTAGAAATCTTGGACAGTGCAACCATCGTTAATTTTGTGGAAGACGAAGAAGCTTTCAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGACAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAAAGTCTTAGATTGTTGGAGACTCATTTTGGGATCGATACGAAACCCGATCCCGACGAGCTTTCTTCCGTCTATGGCTCCTTGTTCTTGCAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAAGAAACCAAGAAGATGATGCTGGCAATGGCCAATGGGATTGGCTTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGCTTTCTGAAGAAAGCTGTGGATAGAGAGTCCACCAAACTCGCCGCAGCTTAA

mRNA sequence

ATGAGCGTAGAAATCTTGGACAGTGCAACCATCGTTAATTTTGTGGAAGACGAAGAAGCTTTCAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGACAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAAAGTCTTAGATTGTTGGAGACTCATTTTGGGATCGATACGAAACCCGATCCCGACGAGCTTTCTTCCGTCTATGGCTCCTTGTTCTTGCAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAAGAAACCAAGAAGATGATGCTGGCAATGGCCAATGGGATTGGCTTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGCTTTCTGAAGAAAGCTGTGGATAGAGAGTCCACCAAACTCGCCGCAGCTTAA

Coding sequence (CDS)

ATGAGCGTAGAAATCTTGGACAGTGCAACCATCGTTAATTTTGTGGAAGACGAAGAAGCTTTCAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGACAGAGATGGAGTTCTTTGTTATGGAGAGATGTTGAAGGAGTTGCAAAGTCTTAGATTGTTGGAGACTCATTTTGGGATCGATACGAAACCCGATCCCGACGAGCTTTCTTCCGTCTATGGCTCCTTGTTCTTGCAGTTCGATCGCGACTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAAGAAACCAAGAAGATGATGCTGGCAATGGCCAATGGGATTGGCTTTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGCTTTCTGAAGAAAGCTGTGGATAGAGAGTCCACCAAACTCGCCGCAGCTTAA

Protein sequence

MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEENSFLKKAVDRESTKLAAA

Homology

[Close]

BLAST of Cla97C02G028890 vs. NCBI nr
Match: XP_004144527.1 (PREDICTED: uncharacterized protein LOC101208564 [Cucumis sativus] >KGN43458.1 Calcium ion binding protein [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 1.7e-68
Identity = 132/138 (95.65%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLR+LETHFG
Sbjct: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           IDTKPDP+ELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIG SPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLAAA
Sbjct: 121 NSFLKKAVDRESTKLAAA 138

[Close]

BLAST of Cla97C02G028890 vs. NCBI nr
Match: XP_008455503.1 (PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLR+ ETHFG
Sbjct: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           IDTKPDP+ELSSVY SLFLQFDRDCNGKVDLGEFM ETKKMMLAMANGIG SPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLAAA
Sbjct: 121 NSFLKKAVDRESTKLAAA 138

[Close]

BLAST of Cla97C02G028890 vs. NCBI nr
Match: XP_022930660.1 (uncharacterized protein LOC111437061 [Cucurbita moschata])

HSP 1 Score: 238.0 bits (606), Expect = 1.9e-59
Identity = 116/137 (84.67%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVEILDSATIVNFVED+E F   +RERFSHLD+D DGVL Y EML+ELQSLR+ ETHFG
Sbjct: 1   MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           ID KPDPDELSSVYGSLFLQFDRDC+GKVD+GEFMEETKKMM+AMANGIGFSPVQM+LEE
Sbjct: 61  IDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMVAMANGIGFSPVQMVLEE 120

Query: 121 NSFLKKAVDRESTKLAA 138
           NSFLKKAV+RESTK+ A
Sbjct: 121 NSFLKKAVERESTKVGA 137

[Close]

BLAST of Cla97C02G028890 vs. NCBI nr
Match: XP_022952569.1 (uncharacterized protein LOC111455222 [Cucurbita moschata])

HSP 1 Score: 234.2 bits (596), Expect = 2.7e-58
Identity = 117/138 (84.78%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLR+LETHFG
Sbjct: 1   MSVEILDSATIVSFVEDEEAFRATITEHFRELDMDRDGVLSYGEMLKELQSLRVLETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           +D KPDP+ELSSVY SLF QFDRDCNGKVDLGEFM ET+KMMLAMANGIG SPV+M+LEE
Sbjct: 61  VDVKPDPEELSSVYASLFSQFDRDCNGKVDLGEFMAETRKMMLAMANGIGLSPVRMVLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLA A
Sbjct: 121 NSFLKKAVDRESTKLAVA 138

[Close]

BLAST of Cla97C02G028890 vs. NCBI nr
Match: XP_023529817.1 (uncharacterized protein LOC111792531 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 3.5e-58
Identity = 115/137 (83.94%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVEILD ATIVNFVED+E F   +RERFSHLD+D DGVL Y EML+ELQSLR+ ETHFG
Sbjct: 1   MSVEILDGATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           ID KPDPDELSSVYGSLFLQFDRD NGKVD+GEFMEETKKMM+AMANGIGFSPVQM+LEE
Sbjct: 61  IDVKPDPDELSSVYGSLFLQFDRDRNGKVDVGEFMEETKKMMVAMANGIGFSPVQMVLEE 120

Query: 121 NSFLKKAVDRESTKLAA 138
           NSFLKKAV+RESTK+ A
Sbjct: 121 NSFLKKAVERESTKVGA 137

[Close]

BLAST of Cla97C02G028890 vs. TrEMBL
Match: tr|A0A0A0K1Y0|A0A0A0K1Y0_CUCSA (Calcium ion binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G037620 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68
Identity = 132/138 (95.65%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLR+LETHFG
Sbjct: 1   MSVEILNSATIMNFVEDEEAFSGWIRERFSHLDIDRDGVLCYGEMLKELQSLRVLETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           IDTKPDP+ELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIG SPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLAAA
Sbjct: 121 NSFLKKAVDRESTKLAAA 138

[Close]

BLAST of Cla97C02G028890 vs. TrEMBL
Match: tr|A0A1S3C1T0|A0A1S3C1T0_CUCME (uncharacterized protein LOC103495655 OS=Cucumis melo OX=3656 GN=LOC103495655 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.2e-68
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLR+ ETHFG
Sbjct: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           IDTKPDP+ELSSVY SLFLQFDRDCNGKVDLGEFM ETKKMMLAMANGIG SPVQMLLEE
Sbjct: 61  IDTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
           NSFLKKAVDRESTKLAAA
Sbjct: 121 NSFLKKAVDRESTKLAAA 138

[Close]

BLAST of Cla97C02G028890 vs. TrEMBL
Match: tr|A0A061DTS7|A0A061DTS7_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_002258 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.5e-53
Identity = 106/137 (77.37%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVE+LDSATIVNFVEDEEAF+ WI +RF+HLD D DG+L Y E+LKELQSLR+ ETHFG
Sbjct: 1   MSVEVLDSATIVNFVEDEEAFNVWICDRFAHLDTDHDGLLSYAELLKELQSLRVFETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           ID K DP EL+ VY SLF+QFD D NG VDLGEF  E+K+MMLAMANG+GF PVQMLLEE
Sbjct: 61  IDVKTDPKELAHVYNSLFVQFDHDSNGTVDLGEFKAESKRMMLAMANGMGFLPVQMLLEE 120

Query: 121 NSFLKKAVDRESTKLAA 138
            SFLKKAVDRESTKLAA
Sbjct: 121 GSFLKKAVDRESTKLAA 137

[Close]

BLAST of Cla97C02G028890 vs. TrEMBL
Match: tr|A0A2I4H1C7|A0A2I4H1C7_9ROSI (uncharacterized protein LOC109012648 OS=Juglans regia OX=51240 GN=LOC109012648 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.8e-50
Identity = 100/136 (73.53%), Postives = 117/136 (86.03%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVE+LD+ATI NFV+DEEAF   + +RF+HLD + DG+L Y EMLKELQSLR+ ETHFG
Sbjct: 1   MSVEVLDAATIFNFVDDEEAFEISVCDRFAHLDTNHDGLLSYVEMLKELQSLRVFETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           ID KPDPDEL+ VY SLF+QFD D NG VDL EF EETK+MMLAMANG+GF PVQM+LEE
Sbjct: 61  IDVKPDPDELARVYASLFMQFDHDSNGTVDLVEFKEETKRMMLAMANGMGFLPVQMILEE 120

Query: 121 NSFLKKAVDRESTKLA 137
           +SFLKKAVDREST++A
Sbjct: 121 DSFLKKAVDRESTRVA 136

[Close]

BLAST of Cla97C02G028890 vs. TrEMBL
Match: tr|A0A1R3JWY4|A0A1R3JWY4_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03841 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-49
Identity = 100/138 (72.46%), Postives = 116/138 (84.06%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           MSVE+LD ATIVNF+EDEEAF+G+I +RF+ LD D DG+L Y E+LKELQSLR+ ETHFG
Sbjct: 1   MSVEVLDGATIVNFIEDEEAFNGYICDRFALLDSDHDGLLSYAELLKELQSLRVFETHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEE 120
           ID K DP EL+ VY SLF+QFD D NG VDL EF  ETK+MMLAMANG+GF P+QM+LEE
Sbjct: 61  IDVKTDPKELARVYNSLFVQFDHDSNGTVDLEEFKAETKRMMLAMANGLGFLPIQMVLEE 120

Query: 121 NSFLKKAVDRESTKLAAA 139
            SFLKKAV+RESTKLA A
Sbjct: 121 GSFLKKAVERESTKLALA 138

[Close]

BLAST of Cla97C02G028890 vs. TAIR10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 136.0 bits (341), Expect = 1.8e-32
Identity = 66/140 (47.14%), Postives = 101/140 (72.14%), Query Frame = 0


Query: 1   MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFG 60
           M V ++D +T+ +FV+DEE F   + ERF+ LD+++DGVL   E+ K  +S+RLLE+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  IDTKPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLL-- 120
           +D     DEL+++Y S+F +FD D +G VDL EF  E KK++LA+A+G+G  P+ M+L  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 EENSFLKKAVDRESTKLAAA 139
           ++++FLKKA D E++KL  A
Sbjct: 121 DDDNFLKKAADLEASKLEKA 140

[Close]

BLAST of Cla97C02G028890 vs. TAIR10
Match: AT1G54530.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-11
Identity = 38/128 (29.69%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 5   ILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDTK 64
           ++ S T++ F+ D ++F     + F  LD+D++G+L   E+ + L ++  +E+       
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEVA---- 64

Query: 65  PDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEENSFL 124
              DE  +VY ++F +F  D   K     F +   +++ AMA GIG SPV M++  +  +
Sbjct: 65  -PGDETDNVYNAIFERFGEDLVPK----NFRDLIAEILTAMARGIGNSPVIMVVHNDGLI 123

Query: 125 KKAVDRES 133
            KAV  ES
Sbjct: 125 MKAVLHES 123

[Close]

BLAST of Cla97C02G028890 vs. TAIR10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09
Identity = 35/125 (28.00%), Postives = 57/125 (45.60%), Query Frame = 0


Query: 4   EILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRLLETHFGIDT 63
           ++LD + IV  VE+E+ F  ++ ++F  LD D DG L   E+   +  +          T
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGT 72

Query: 64  KPDPDELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIGFSPVQMLLEENSF 123
            PD D    +Y  +  +F      KV   EF E    ++L MA G+   P+ +L  +   
Sbjct: 73  SPDSDH---IYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 124 LKKAV 129
           L + V
Sbjct: 133 LSEFV 134

The following BLAST results are available for this feature:

BLAST of Cla97C02G028890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144527.1	1.7e-68	95.65	PREDICTED: uncharacterized protein LOC101208564 [Cucumis sativus] >KGN43458.1 Ca...	[more]
XP_008455503.1	4.9e-68	95.65	PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]	[more]
XP_022930660.1	1.9e-59	84.67	uncharacterized protein LOC111437061 [Cucurbita moschata]	[more]
XP_022952569.1	2.7e-58	84.78	uncharacterized protein LOC111455222 [Cucurbita moschata]	[more]
XP_023529817.1	3.5e-58	83.94	uncharacterized protein LOC111792531 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C02G028890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K1Y0\|A0A0A0K1Y0_CUCSA	1.1e-68	95.65	Calcium ion binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G037620 PE=4 SV=1	[more]
tr\|A0A1S3C1T0\|A0A1S3C1T0_CUCME	3.2e-68	95.65	uncharacterized protein LOC103495655 OS=Cucumis melo OX=3656 GN=LOC103495655 PE=...	[more]
tr\|A0A061DTS7\|A0A061DTS7_THECC	6.5e-53	77.37	Calcium-binding EF-hand family protein OS=Theobroma cacao OX=3641 GN=TCM_002258 ...	[more]
tr\|A0A2I4H1C7\|A0A2I4H1C7_9ROSI	8.8e-50	73.53	uncharacterized protein LOC109012648 OS=Juglans regia OX=51240 GN=LOC109012648 P...	[more]
tr\|A0A1R3JWY4\|A0A1R3JWY4_COCAP	1.5e-49	72.46	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_03841 PE=4 ...	[more]

BLAST of Cla97C02G028890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G028890 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44310.1	1.8e-32	47.14	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	3.9e-11	29.69	Calcium-binding EF hand family protein	[more]
AT4G38810.2	2.1e-09	28.00	Calcium-binding EF-hand family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G028890.1	Cla97C02G028890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 24..52 e-value: 2.1 score: 15.1 coord: 73..101 e-value: 7.8 score: 10.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 25..96 e-value: 1.1E-8 score: 35.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 25..55 score: 7.623
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 8.879
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 9..109 e-value: 2.7E-9 score: 38.6
None	No IPR available	PANTHER	PTHR44089:SF4	SUBFAMILY NOT NAMED	coord: 1..136
None	No IPR available	PANTHER	PTHR44089	FAMILY NOT NAMED	coord: 1..136
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 22..105

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G028890	Watermelon (97103) v2	wmbwmbB091
Cla97C02G028890	Silver-seed gourd	carwmbB0202
Cla97C02G028890	Silver-seed gourd	carwmbB1124
Cla97C02G028890	Cucumber (Gy14) v2	cgybwmbB118
Cla97C02G028890	Cucumber (Gy14) v2	cgybwmbB500
Cla97C02G028890	Cucumber (Gy14) v2	cgybwmbB502
Cla97C02G028890	Cucumber (Gy14) v1	cgywmbB326
Cla97C02G028890	Cucurbita maxima (Rimu)	cmawmbB101
Cla97C02G028890	Cucurbita maxima (Rimu)	cmawmbB531
Cla97C02G028890	Cucurbita moschata (Rifu)	cmowmbB094
Cla97C02G028890	Cucurbita moschata (Rifu)	cmowmbB512
Cla97C02G028890	Wild cucumber (PI 183967)	cpiwmbB126
Cla97C02G028890	Wild cucumber (PI 183967)	cpiwmbB552
Cla97C02G028890	Wild cucumber (PI 183967)	cpiwmbB553
Cla97C02G028890	Cucumber (Chinese Long) v3	cucwmbB127
Cla97C02G028890	Cucumber (Chinese Long) v3	cucwmbB548
Cla97C02G028890	Cucumber (Chinese Long) v3	cucwmbB549
Cla97C02G028890	Cucumber (Chinese Long) v2	cuwmbB124
Cla97C02G028890	Cucumber (Chinese Long) v2	cuwmbB527
Cla97C02G028890	Cucumber (Chinese Long) v2	cuwmbB529
Cla97C02G028890	Bottle gourd (USVL1VR-Ls)	lsiwmbB055
Cla97C02G028890	Bottle gourd (USVL1VR-Ls)	lsiwmbB086
Cla97C02G028890	Melon (DHL92) v3.6.1	medwmbB090
Cla97C02G028890	Melon (DHL92) v3.6.1	medwmbB164
Cla97C02G028890	Melon (DHL92) v3.5.1	mewmbB094
Cla97C02G028890	Melon (DHL92) v3.5.1	mewmbB178
Cla97C02G028890	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G028890	Watermelon (Charleston Gray)	wcgwmbB150
Cla97C02G028890	Watermelon (97103) v1	wmwmbB317
Cla97C02G028890	Wax gourd	wgowmbB241
Cla97C02G028890	Wax gourd	wgowmbB376