Cla97C02G027640 (gene) Watermelon (97103) v2

Overview
NameCla97C02G027640
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr02 : 1302922 .. 1303233 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCTCCAACTTGGCATCTTTCTTTTATTGTTTTTGGGAAAAGTGAAATCTTTTTCCTTTCATCTTCTTTTTTTCATTGTTTGTATTGAATATGCATGGGGTACAGGTTATGTCTTCTCTGGTGGGGCTAACACTGGAACGTTTCTCTTTTTCTTTTCGCTATGTGTTGCATTGTGGACTGTGCTGTCCCAAGCACTCCAGACAAAGGGGTCAACAAAAGTAGCACAGAGTCCAAGGAGAATATCCACGAAGATTTCTGTTAATATTGTAAGTCATCATCTCTATTCATCTGCTGGTAATTCCATATAA

mRNA sequence

ATGGTCCTCCAACTTGGCATCTTTCTTTTATTGTTTTTGGGAAAAGTGAAATCTTTTTCCTTTCATCTTCTTTTTTTCATTGTTTGTATTGAATATGCATGGGGTACAGGTTATGTCTTCTCTGGTGGGGCTAACACTGGAACGTTTCTCTTTTTCTTTTCGCTATGTGTTGCATTGTGGACTGTGCTGTCCCAAGCACTCCAGACAAAGGGGTCAACAAAAGTAGCACAGAGTCCAAGGAGAATATCCACGAAGATTTCTGTTAATATTGTAAGTCATCATCTCTATTCATCTGCTGGTAATTCCATATAA

Coding sequence (CDS)

ATGGTCCTCCAACTTGGCATCTTTCTTTTATTGTTTTTGGGAAAAGTGAAATCTTTTTCCTTTCATCTTCTTTTTTTCATTGTTTGTATTGAATATGCATGGGGTACAGGTTATGTCTTCTCTGGTGGGGCTAACACTGGAACGTTTCTCTTTTTCTTTTCGCTATGTGTTGCATTGTGGACTGTGCTGTCCCAAGCACTCCAGACAAAGGGGTCAACAAAAGTAGCACAGAGTCCAAGGAGAATATCCACGAAGATTTCTGTTAATATTGTAAGTCATCATCTCTATTCATCTGCTGGTAATTCCATATAA

Protein sequence

MVLQLGIFLLLFLGKVKSFSFHLLFFIVCIEYAWGTGYVFSGGANTGTFLFFFSLCVALWTVLSQALQTKGSTKVAQSPRRISTKISVNIVSHHLYSSAGNSI
Homology
[Close]
BLAST of Cla97C02G027640 vs. NCBI nr
Match: KGN43592.1 (hypothetical protein Csa_7G047280 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-08
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0 

Query: 61  TVLSQALQTKGSTKVAQSPRRISTKISVNIVSHHLYSSAGNS 103
           TVLSQALQTKGSTKVA+SPRRI TKIS NIVSHHLYS A N+
Sbjct: 47  TVLSQALQTKGSTKVARSPRRICTKISRNIVSHHLYSPAVNA 88

[Close]
BLAST of Cla97C02G027640 vs. TrEMBL
Match: tr|A0A0A0K5P2|A0A0A0K5P2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047280 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-08
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = 0 

Query: 61  TVLSQALQTKGSTKVAQSPRRISTKISVNIVSHHLYSSAGNS 103
           TVLSQALQTKGSTKVA+SPRRI TKIS NIVSHHLYS A N+
Sbjct: 47  TVLSQALQTKGSTKVARSPRRICTKISRNIVSHHLYSPAVNA 88

The following BLAST results are available for this feature:
BLAST of Cla97C02G027640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43592.12.5e-0885.71hypothetical protein Csa_7G047280 [Cucumis sativus][more]
BLAST of Cla97C02G027640 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K5P2|A0A0A0K5P2_CUCSA1.6e-0885.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047280 PE=4 SV=1[more]
BLAST of Cla97C02G027640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C02G027640 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G027640.1Cla97C02G027640.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G027640Csa7G047280Cucumber (Chinese Long) v2cuwmbB529
Cla97C02G027640ClCG02G001220Watermelon (Charleston Gray)wcgwmbB138
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G027640Watermelon (97103) v2wmbwmbB090
Cla97C02G027640Watermelon (97103) v2wmbwmbB096
Cla97C02G027640Silver-seed gourdcarwmbB0027
Cla97C02G027640Silver-seed gourdcarwmbB0348
Cla97C02G027640Silver-seed gourdcarwmbB0752
Cla97C02G027640Silver-seed gourdcarwmbB0915
Cla97C02G027640Cucumber (Gy14) v2cgybwmbB502
Cla97C02G027640Cucumber (Gy14) v1cgywmbB248
Cla97C02G027640Cucurbita maxima (Rimu)cmawmbB105
Cla97C02G027640Cucurbita maxima (Rimu)cmawmbB221
Cla97C02G027640Cucurbita maxima (Rimu)cmawmbB531
Cla97C02G027640Cucurbita maxima (Rimu)cmawmbB618
Cla97C02G027640Cucurbita moschata (Rifu)cmowmbB094
Cla97C02G027640Cucurbita moschata (Rifu)cmowmbB512
Cla97C02G027640Cucurbita moschata (Rifu)cmowmbB552
Cla97C02G027640Cucurbita moschata (Rifu)cmowmbB593
Cla97C02G027640Wild cucumber (PI 183967)cpiwmbB030
Cla97C02G027640Wild cucumber (PI 183967)cpiwmbB553
Cla97C02G027640Cucumber (Chinese Long) v3cucwmbB549
Cla97C02G027640Cucumber (Chinese Long) v2cuwmbB029
Cla97C02G027640Bottle gourd (USVL1VR-Ls)lsiwmbB060
Cla97C02G027640Bottle gourd (USVL1VR-Ls)lsiwmbB086
Cla97C02G027640Melon (DHL92) v3.6.1medwmbB164
Cla97C02G027640Melon (DHL92) v3.5.1mewmbB178
Cla97C02G027640Watermelon (Charleston Gray)wcgwmbB146
Cla97C02G027640Watermelon (Charleston Gray)wcgwmbB184
Cla97C02G027640Watermelon (97103) v1wmwmbB122
Cla97C02G027640Watermelon (97103) v1wmwmbB324
Cla97C02G027640Watermelon (97103) v1wmwmbB332
Cla97C02G027640Wax gourdwgowmbB251
Cla97C02G027640Wax gourdwgowmbB365