Cla97C01G026200 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATCGGGAAACATAATGATGATGGAGATGATAAAACAAAAAACAGAAAATCCAATATTTGCCAGGAATGTGGCGCTGAGTTCAGGAAGCCTGCTTACTTGAAGCAACATATGCAAAGTCATTCGCTCGAGGTATTTAAAGATATTTCCTATTAATTTATTTTACCATCACGTGCTTGGTATATTTGTTTCTCTCATACTCAAAGAGATGTTAGTACAAAAAATGTGCAATATACTGTAAACAAATGGTTATGTGGAATATATGATGTGATATGTTGGTGAATGGTTAATATTATTCATGTGGGTATGGTTGGCCATCTAGATGCTTGAATTTGGTTCCAACGTTATGACCGATTACAGTTCTCATAAATTGGTTTGAACGACGTGTTTTATTGTTTACATATGGCTGTCAAAGTACATCATTAGGTTGTGTTCTTGCTAGCAAAAGATTTCCTTTGATATCAACAGTCAATTTTTAGTATTTGATCTTTGATTTTAACCATCATTTTTACATGTGTTATGTCAATTATCATTTATTATGAATGATGTATTATGAATTATTTTAAGGTTCCTTTCTGTCAATTCAATATATTTTTTCTCTTGCATTGAAGTTTATTAGTTTTGCAGGAACAAATCCTTAAATATAATAAAATAATGTGAAAGATACTGGATATCTCAGCGTGAAGCATTGGATCCCACATTAAGAACTCCAAAATGCTTGAGGCTGCATTTTTCTCGCTTGACTGGATCAGTATCAGGTTGGGAGACCTCCTGAGAAGCTCCATCAAGTGGGCCTCGATCACGCTACAGTAGTCTGAGGTTTGAAGTCTAGTAATTGATTGTGTTGGGAGACATGTTTCAGTCGATAAACTCAGAGCTGACCAATTTTGTTGCATTACTTTAATGCAGAGGCCATATATCTGTTCCGTAGATGGTTGTGAAGCCAGTTATAGAAGAAAGGATCATCTGACCCGCCACCTTCTCCAGCATCAAGGAATTATATTCAAATGTCCAATTGAGAGCTGTAACCGTGAATTTGCATATATATCATGTGTAAATAGACACTTGAAAGAATGCCATGGAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGAAAAGTTTTCAGATATGCCTCTCAATTGCAAAAGCATGAGGATTCCCATGGTAAGTTCCTATCCTTTTTTCGTAGGCACTAAATTTTGACTATTTGTTTTGACACATTCATGTATTAATTTCAAGTTTTATTATACTGTAGTCAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCTTGAGAATATTTACCAACAAGCAATGCCTAAGGGCTCATATGCAGTCCTGCCACCAATACATCAAATGTGAGATTTGTGGGGAAAAAAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCACTGGAGGCAATTCCATGTAGGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGTAAGTAGCACAGACTCTGCAAATGCCTTAACTGGTGAAACTAATATTAGCTGAGCTATAGAGAGGATTTCTAATGAATGGCATTTCTGTTTATTTAGATGGTATCTTTGACATGTTCCATGTATTGATTTCCCAGGCTTCAAATCTCCAGCAACACATGAAGGTTGTGCATATGGGACAAAAGCCGTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTATAAGCATGTGAGAGACAACCATGAGAAAAGTGGCCAGCATGTTTACACTAATGTAAGTTCCCATTTAGTTAACTCTAAAGTATTTGTGTACTCCTGACATTCAGATGGATTACTGAAGGAATTTGTTGGTGCTCTGGAATCAGGGGGATTTTGAAGCAGCTGATGAACAATTCCGCTCAAAACCAAGGGGAGGGAGAAAAAGAATCTGTCCAACTGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGAGTTTGATTTCACGATGGATGAAGAATGTTAG ATGGAGATCGGGAAACATAATGATGATGGAGATGATAAAACAAAAAACAGAAAATCCAATATTTGCCAGGAATGTGGCGCTGAGTTCAGGAAGCCTGCTTACTTGAAGCAACATATGCAAAGTCATTCGCTCGAGAGGCCATATATCTGTTCCGTAGATGGTTGTGAAGCCAGTTATAGAAGAAAGGATCATCTGACCCGCCACCTTCTCCAGCATCAAGGAATTATATTCAAATGTCCAATTGAGAGCTGTAACCGTGAATTTGCATATATATCATGTGTAAATAGACACTTGAAAGAATGCCATGGAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGAAAAGTTTTCAGATATGCCTCTCAATTGCAAAAGCATGAGGATTCCCATGTCAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCTTGAGAATATTTACCAACAAGCAATGCCTAAGGGCTCATATGCAGTCCTGCCACCAATACATCAAATGTGAGATTTGTGGGGAAAAAAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCACTGGAGGCAATTCCATGTAGGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGCTTCAAATCTCCAGCAACACATGAAGGTTGTGCATATGGGACAAAAGCCGTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTATAAGCATGTGAGAGACAACCATGAGAAAAGTGGCCAGCATGTTTACACTAATGGGGATTTTGAAGCAGCTGATGAACAATTCCGCTCAAAACCAAGGGGAGGGAGAAAAAGAATCTGTCCAACTGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGAGTTTGATTTCACGATGGATGAAGAATGTTAG ATGGAGATCGGGAAACATAATGATGATGGAGATGATAAAACAAAAAACAGAAAATCCAATATTTGCCAGGAATGTGGCGCTGAGTTCAGGAAGCCTGCTTACTTGAAGCAACATATGCAAAGTCATTCGCTCGAGAGGCCATATATCTGTTCCGTAGATGGTTGTGAAGCCAGTTATAGAAGAAAGGATCATCTGACCCGCCACCTTCTCCAGCATCAAGGAATTATATTCAAATGTCCAATTGAGAGCTGTAACCGTGAATTTGCATATATATCATGTGTAAATAGACACTTGAAAGAATGCCATGGAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGAAAAGTTTTCAGATATGCCTCTCAATTGCAAAAGCATGAGGATTCCCATGTCAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCTTGAGAATATTTACCAACAAGCAATGCCTAAGGGCTCATATGCAGTCCTGCCACCAATACATCAAATGTGAGATTTGTGGGGAAAAAAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCACTGGAGGCAATTCCATGTAGGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGCTTCAAATCTCCAGCAACACATGAAGGTTGTGCATATGGGACAAAAGCCGTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTATAAGCATGTGAGAGACAACCATGAGAAAAGTGGCCAGCATGTTTACACTAATGGGGATTTTGAAGCAGCTGATGAACAATTCCGCTCAAAACCAAGGGGAGGGAGAAAAAGAATCTGTCCAACTGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGAGTTTGATTTCACGATGGATGAAGAATGTTAG MEIGKHNDDGDDKTKNRKSNICQECGAEFRKPAYLKQHMQSHSLERPYICSVDGCEASYRRKDHLTRHLLQHQGIIFKCPIESCNREFAYISCVNRHLKECHGGEAPPEECQKQFVCPEDGCGKVFRYASQLQKHEDSHVKLDSIEACCTEPGCLRIFTNKQCLRAHMQSCHQYIKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCRYEGCSKVFSTASNLQQHMKVVHMGQKPFACCFPGCGMRFGYKHVRDNHEKSGQHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSEFDFTMDEEC
BLAST of Cla97C01G026200 vs. NCBI nr
Match: XP_008446968.1 (PREDICTED: transcription factor IIIA [Cucumis melo]) HSP 1 Score: 579.7 bits (1493), Expect = 5.9e-162 Identity = 265/311 (85.21%), Postives = 278/311 (89.39%), Query Frame = 0
BLAST of Cla97C01G026200 vs. NCBI nr
Match: KGN52327.1 (hypothetical protein Csa_5G623900 [Cucumis sativus]) HSP 1 Score: 563.1 bits (1450), Expect = 5.7e-157 Identity = 268/323 (82.97%), Postives = 278/323 (86.07%), Query Frame = 0
BLAST of Cla97C01G026200 vs. NCBI nr
Match: XP_004142387.2 (PREDICTED: zinc finger X-linked protein ZXDB [Cucumis sativus]) HSP 1 Score: 563.1 bits (1450), Expect = 5.7e-157 Identity = 268/323 (82.97%), Postives = 278/323 (86.07%), Query Frame = 0
BLAST of Cla97C01G026200 vs. NCBI nr
Match: XP_022988268.1 (transcription factor IIIA isoform X1 [Cucurbita maxima]) HSP 1 Score: 503.4 bits (1295), Expect = 5.4e-139 Identity = 257/316 (81.33%), Postives = 267/316 (84.49%), Query Frame = 0
BLAST of Cla97C01G026200 vs. NCBI nr
Match: XP_022945877.1 (transcription factor IIIA-like [Cucurbita moschata]) HSP 1 Score: 500.4 bits (1287), Expect = 4.6e-138 Identity = 241/314 (76.75%), Postives = 271/314 (86.31%), Query Frame = 0
BLAST of Cla97C01G026200 vs. TrEMBL
Match: tr|A0A1S3BH74|A0A1S3BH74_CUCME (transcription factor IIIA OS=Cucumis melo OX=3656 GN=LOC103489521 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 3.9e-162 Identity = 265/311 (85.21%), Postives = 278/311 (89.39%), Query Frame = 0
BLAST of Cla97C01G026200 vs. TrEMBL
Match: tr|A0A0A0KV54|A0A0A0KV54_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623900 PE=4 SV=1) HSP 1 Score: 563.1 bits (1450), Expect = 3.8e-157 Identity = 268/323 (82.97%), Postives = 278/323 (86.07%), Query Frame = 0
BLAST of Cla97C01G026200 vs. TrEMBL
Match: tr|A0A2P5CW95|A0A2P5CW95_PARAD (TFIIH C1-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_118300 PE=4 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 1.1e-111 Identity = 190/309 (61.49%), Postives = 234/309 (75.73%), Query Frame = 0
BLAST of Cla97C01G026200 vs. TrEMBL
Match: tr|A0A2K1WRF6|A0A2K1WRF6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G081100v3 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 8.6e-109 Identity = 183/308 (59.42%), Postives = 227/308 (73.70%), Query Frame = 0
BLAST of Cla97C01G026200 vs. TrEMBL
Match: tr|A0A2C9WIB9|A0A2C9WIB9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G205100 PE=4 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.1e-106 Identity = 182/307 (59.28%), Postives = 219/307 (71.34%), Query Frame = 0
BLAST of Cla97C01G026200 vs. Swiss-Prot
Match: sp|Q84MZ4|TF3A_ARATH (Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 2.2e-67 Identity = 138/326 (42.33%), Postives = 168/326 (51.53%), Query Frame = 0
BLAST of Cla97C01G026200 vs. Swiss-Prot
Match: sp|Q9UTL5|TF3A_SCHPO (Transcription factor IIIA OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sfc2 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 8.0e-09 Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 0
BLAST of Cla97C01G026200 vs. Swiss-Prot
Match: sp|Q59KL6|TF3A_CANAL (Transcription factor IIIA OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PZF1 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08 Identity = 45/183 (24.59%), Postives = 71/183 (38.80%), Query Frame = 0
BLAST of Cla97C01G026200 vs. Swiss-Prot
Match: sp|Q8SW43|Z379_ENCCU (Zinc finger C2H2 protein ECU03_0790 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=ECU03_0790 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08 Identity = 57/239 (23.85%), Postives = 81/239 (33.89%), Query Frame = 0
BLAST of Cla97C01G026200 vs. Swiss-Prot
Match: sp|P39933|TF3A_YEAST (Transcription factor IIIA OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PZF1 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 8.8e-08 Identity = 73/214 (34.11%), Postives = 92/214 (42.99%), Query Frame = 0
BLAST of Cla97C01G026200 vs. TAIR10
Match: AT1G72050.2 (transcription factor IIIA) HSP 1 Score: 257.3 bits (656), Expect = 1.2e-68 Identity = 138/326 (42.33%), Postives = 168/326 (51.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |