Cla97C01G024340 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G024340
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Cla97Chr01 : 35459427 .. 35460224 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTCTACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGGCCGTGAAGCTCTCCCCCAACGCCCCTGAAATTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACGGCCAGCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACTTGACCGGAGAGTTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCTGAGCTTCTATCTCGCAATGGCGTGAAGTTTGGTGAAGCTGTGTGGTTCAAGGCTGGATCTCAAATCTTCAGCGAGGGAGGGCTCGACTACTTGGGGAATCCCAGCTTGATCCACGCACAGAGCATTTTGGCCATCTGGGCCACTCAGGTTGTGTTGATGGGCGCCGTCGAGGGCTACCGCATTGCCGGCGGCCCGCTCGGGGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGCTCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAAGGTCCATTGGAGAATTTGGCTGACCACCTTTCTGACCCAGTCAACAACAATGCTTGGGCTTATGCCACAAACTTTGTTCCCGGAAAGTGA

mRNA sequence

ATGGCTGCCTCTACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGGCCGTGAAGCTCTCCCCCAACGCCCCTGAAATTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACGGCCAGCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACTTGACCGGAGAGTTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCTGAGCTTCTATCTCGCAATGGCGTGAAGTTTGGTGAAGCTGTGTGGTTCAAGGCTGGATCTCAAATCTTCAGCGAGGGAGGGCTCGACTACTTGGGGAATCCCAGCTTGATCCACGCACAGAGCATTTTGGCCATCTGGGCCACTCAGGTTGTGTTGATGGGCGCCGTCGAGGGCTACCGCATTGCCGGCGGCCCGCTCGGGGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGCTCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAAGGTCCATTGGAGAATTTGGCTGACCACCTTTCTGACCCAGTCAACAACAATGCTTGGGCTTATGCCACAAACTTTGTTCCCGGAAAGTGA

Coding sequence (CDS)

ATGGCTGCCTCTACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGGCCGTGAAGCTCTCCCCCAACGCCCCTGAAATTCAGGGCAATGGAAGAGTCAGCATGAGGAAGACGGCCAGCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACTTGACCGGAGAGTTCCCCGGTGACTACGGCTGGGACACTGCTGGACTTTCAGCCGATCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCTGAGCTTCTATCTCGCAATGGCGTGAAGTTTGGTGAAGCTGTGTGGTTCAAGGCTGGATCTCAAATCTTCAGCGAGGGAGGGCTCGACTACTTGGGGAATCCCAGCTTGATCCACGCACAGAGCATTTTGGCCATCTGGGCCACTCAGGTTGTGTTGATGGGCGCCGTCGAGGGCTACCGCATTGCCGGCGGCCCGCTCGGGGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGCTCAAGAATGGAAGGTTGGCCATGTTCTCCATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAAGGTCCATTGGAGAATTTGGCTGACCACCTTTCTGACCCAGTCAACAACAATGCTTGGGCTTATGCCACAAACTTTGTTCCCGGAAAGTGA

Protein sequence

MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWAYATNFVPGK

Homology

[Close]

BLAST of Cla97C01G024340 vs. NCBI nr
Match: XP_008439658.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo])

HSP 1 Score: 533.1 bits (1372), Expect = 5.4e-148
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKAVKLSPNAPEIQG GR++MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHLSDPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLSDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. NCBI nr
Match: XP_022926035.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita moschata] >XP_022979176.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima] >XP_023545170.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 5.4e-148
Identity = 259/265 (97.74%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKAVKLSPN P+IQGN RVSMRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. NCBI nr
Match: XP_008439659.2 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo])

HSP 1 Score: 532.3 bits (1370), Expect = 9.2e-148
Identity = 257/265 (96.98%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKAVKLSPNAPEIQG GR++MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. NCBI nr
Match: XP_021904725.1 (chlorophyll a-b binding protein of LHCII type 1 [Carica papaya])

HSP 1 Score: 531.9 bits (1369), Expect = 1.2e-147
Identity = 256/265 (96.60%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKAVKLSP+APE+ GNGRVSMRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPSAPELMGNGRVSMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. NCBI nr
Match: XP_022926033.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata])

HSP 1 Score: 531.2 bits (1367), Expect = 2.0e-147
Identity = 258/265 (97.36%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKAV LSPN P+IQGN RVSMRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. TrEMBL
Match: tr|A0A1S3AZW8|A0A1S3AZW8_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484385 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 3.6e-148
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKAVKLSPNAPEIQG GR++MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHLSDPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLSDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. TrEMBL
Match: tr|A0A1S3AZZ0|A0A1S3AZZ0_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484386 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 6.1e-148
Identity = 257/265 (96.98%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGKAVKLSPNAPEIQG GR++MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. TrEMBL
Match: tr|A0A0A0KKK7|A0A0A0KKK7_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_6G522680 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.1e-146
Identity = 255/265 (96.23%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+LAG+AVKLSPNAPEIQGN + +MRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. TrEMBL
Match: tr|B9SF47|B9SF47_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RCOM_1214080 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 7.4e-146
Identity = 252/265 (95.09%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPS AGKAVKLSP+APE+ GNGRVSMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. TrEMBL
Match: tr|B9S155|B9S155_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RCOM_0633890 PE=3 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 1.3e-145
Identity = 252/265 (95.09%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPS AGKAVKLSP+APE+ GNGRVSMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. Swiss-Prot
Match: sp|P09756|CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 1.0e-145
Identity = 252/264 (95.45%), Postives = 258/264 (97.73%), Query Frame = 0


Query: 2   AASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGPF 61
           AAS+MALSSPSLAGKAVKL P+APE+   GRVSMRKT +KQVSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPL 181
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 182 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 242 LADHLSDPVNNNAWAYATNFVPGK 266
           LADHL+ PVNNNAWAYATNFVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Cla97C01G024340 vs. Swiss-Prot
Match: sp|P08221|CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.1e-144
Identity = 245/255 (96.08%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 11  PSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70
           P+LAG+AVKLSPNAPEIQGN + +MRKTASK VSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 130
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 131 FKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYP 190
           FKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGEVTDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPV 250
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL+DPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 251 NNNAWAYATNFVPGK 266
           NNNAWAYATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of Cla97C01G024340 vs. Swiss-Prot
Match: sp|P27493|CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB21 PE=2 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.2e-143
Identity = 243/265 (91.70%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSPS AG+AVKLSP+APEI GNGRVSMRKT +K V+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. Swiss-Prot
Match: sp|P27495|CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB40 PE=2 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 6.1e-143
Identity = 246/267 (92.13%), Postives = 257/267 (96.25%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTAS--KQVSSGSPWYGPDRVKYL 60
           MAASTMALSSPS AGKAVKLSP++ EI GNG+V+MRKTAS  K VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLSDPVNNNAWAYATNFVPGK 266
           LENLADHL+DPVNNNAWAYATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of Cla97C01G024340 vs. Swiss-Prot
Match: sp|P07370|CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB1B PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 5.7e-141
Identity = 239/265 (90.19%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSPS AG+AVKLSP+A EI GNGR++MRK  +K   S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEV DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLSDPVNNNAWAYATNFVPGK 266
           NLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Cla97C01G024340 vs. TAIR10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 486.9 bits (1252), Expect = 8.0e-138
Identity = 235/266 (88.35%), Postives = 249/266 (93.61%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+L GKAVKLSP A E+ G GR++MRK +     SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG-G 180
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 181 PLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLSDPVNNNAWAYATNFVPGK 266
           ENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Cla97C01G024340 vs. TAIR10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1)

HSP 1 Score: 484.6 bits (1246), Expect = 4.0e-137
Identity = 236/267 (88.39%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASK-QVSSGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGKAVKLSP A E+ G+GRV+MRKT +K +  SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLSDPVNNNAWAYATNFVPGK 266
           +ENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Cla97C01G024340 vs. TAIR10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3)

HSP 1 Score: 482.6 bits (1241), Expect = 1.5e-136
Identity = 235/267 (88.01%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASK-QVSSGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGKAV LSP A E+ G+GRV+MRKT +K +  SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLSDPVNNNAWAYATNFVPGK 266
           +ENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Cla97C01G024340 vs. TAIR10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2)

HSP 1 Score: 482.6 bits (1241), Expect = 1.5e-136
Identity = 235/267 (88.01%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASK-QVSSGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGKAV LSP A E+ G+GRV+MRKT +K +  SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLSDPVNNNAWAYATNFVPGK 266
           +ENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Cla97C01G024340 vs. TAIR10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 478.4 bits (1230), Expect = 2.9e-135
Identity = 234/267 (87.64%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGNGRVSMRKTASK-QVSSGSPWYGPDRVKYLG 60
           MA+STMALSSP+ AGKAVK  P A ++ G+GRV+MRKT +K +  SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWATQV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 181 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLSDPVNNNAWAYATNFVPGK 266
           LENLADHL+DPVNNNAWA+ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of Cla97C01G024340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439658.1	5.4e-148	97.36	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]	[more]
XP_022926035.1	5.4e-148	97.74	chlorophyll a-b binding protein of LHCII type 1 [Cucurbita moschata] >XP_0229791...	[more]
XP_008439659.2	9.2e-148	96.98	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo]	[more]
XP_021904725.1	1.2e-147	96.60	chlorophyll a-b binding protein of LHCII type 1 [Carica papaya]	[more]
XP_022926033.1	2.0e-147	97.36	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata]	[more]

BLAST of Cla97C01G024340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AZW8\|A0A1S3AZW8_CUCME	3.6e-148	97.36	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3AZZ0\|A0A1S3AZZ0_CUCME	6.1e-148	96.98	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0KKK7\|A0A0A0KKK7_CUCSA	1.1e-146	96.23	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|B9SF47\|B9SF47_RICCO	7.4e-146	95.09	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RC...	[more]
tr\|B9S155\|B9S155_RICCO	1.3e-145	95.09	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis OX=3988 GN=RC...	[more]

BLAST of Cla97C01G024340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P09756\|CB23_SOYBN	1.0e-145	95.45	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
sp\|P08221\|CB21_CUCSA	1.1e-144	96.08	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
sp\|P27493\|CB22_TOBAC	1.2e-143	91.70	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
sp\|P27495\|CB24_TOBAC	6.1e-143	92.13	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
sp\|P07370\|CB2B_SOLLC	5.7e-141	90.19	Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum OX=408...	[more]

BLAST of Cla97C01G024340 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34430.1	8.0e-138	88.35	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	4.0e-137	88.39	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	1.5e-136	88.01	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	1.5e-136	88.01	chlorophyll A/B-binding protein 2	[more]
AT2G34420.1	2.9e-135	87.64	photosystem II light harvesting complex gene B1B2	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009765	photosynthesis, light harvesting

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009536	plastid
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0016168	chlorophyll binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G024340.1	Cla97C01G024340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	G3DSA:1.10.3460.10		coord: 56..258 e-value: 2.6E-98 score: 329.8
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 1.4E-49 score: 168.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..46
None	No IPR available	PANTHER	PTHR21649:SF55	SUBFAMILY NOT NAMED	coord: 1..265
None	No IPR available	SUPERFAMILY	SSF103511	Chlorophyll a-b binding protein	coord: 48..262
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G024340	Watermelon (97103) v2	wmbwmbB015
Cla97C01G024340	Silver-seed gourd	carwmbB0571
Cla97C01G024340	Silver-seed gourd	carwmbB0836
Cla97C01G024340	Silver-seed gourd	carwmbB1005
Cla97C01G024340	Cucumber (Gy14) v2	cgybwmbB012
Cla97C01G024340	Cucumber (Gy14) v2	cgybwmbB394
Cla97C01G024340	Cucumber (Gy14) v1	cgywmbB017
Cla97C01G024340	Cucumber (Gy14) v1	cgywmbB387
Cla97C01G024340	Cucurbita maxima (Rimu)	cmawmbB212
Cla97C01G024340	Cucurbita maxima (Rimu)	cmawmbB396
Cla97C01G024340	Cucurbita maxima (Rimu)	cmawmbB667
Cla97C01G024340	Cucurbita maxima (Rimu)	cmawmbB875
Cla97C01G024340	Cucurbita moschata (Rifu)	cmowmbB196
Cla97C01G024340	Cucurbita moschata (Rifu)	cmowmbB381
Cla97C01G024340	Cucurbita moschata (Rifu)	cmowmbB639
Cla97C01G024340	Cucurbita moschata (Rifu)	cmowmbB849
Cla97C01G024340	Wild cucumber (PI 183967)	cpiwmbB012
Cla97C01G024340	Wild cucumber (PI 183967)	cpiwmbB433
Cla97C01G024340	Cucumber (Chinese Long) v3	cucwmbB011
Cla97C01G024340	Cucumber (Chinese Long) v3	cucwmbB430
Cla97C01G024340	Cucumber (Chinese Long) v2	cuwmbB012
Cla97C01G024340	Cucumber (Chinese Long) v2	cuwmbB412
Cla97C01G024340	Bottle gourd (USVL1VR-Ls)	lsiwmbB115
Cla97C01G024340	Bottle gourd (USVL1VR-Ls)	lsiwmbB154
Cla97C01G024340	Melon (DHL92) v3.6.1	medwmbB130
Cla97C01G024340	Melon (DHL92) v3.6.1	medwmbB507
Cla97C01G024340	Melon (DHL92) v3.5.1	mewmbB140
Cla97C01G024340	Melon (DHL92) v3.5.1	mewmbB515
Cla97C01G024340	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G024340	Watermelon (Charleston Gray)	wcgwmbB174
Cla97C01G024340	Watermelon (97103) v1	wmwmbB113
Cla97C01G024340	Watermelon (97103) v1	wmwmbB234
Cla97C01G024340	Wax gourd	wgowmbB396
Cla97C01G024340	Wax gourd	wgowmbB459