Cla97C01G020720 (gene) Watermelon (97103) v2

Overview
NameCla97C01G020720
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr01 : 33252891 .. 33254875 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAATCAGCGGAGTTAGTGGGGGGAATCATGATGAAGGCTGCCATTGGCGATCTTTCAATCTCGAGAAGCACAGGGACCCAGTAAAGCTCCTTTTTCCCCCCTTCTTAGCTATAGAGCATTAAACCCTAGCCCTAACCCCACATCTGCAATTTGTTTTTTGTTTTTCCCCATCTCAATTCTCACTTTATAATCTCGATTCCCTGTTTCAATTTTGACTTTCAGTGAACTTCAGCTTAATTTCTTTGGCGAACCTTTTGTAGATCAACTTGAACTTATGACTGTATATGTGAATATTTCAGTGCATATCAATTTTCTTGATCTTGATTATTATGCATGATTCATTTGGAGATTTATGATTAGAACACCATTTGTCCAAAGACTGCCTGCATTAACTTTTTCATTACATTTCCCTTCTGTATATCTTCAAGCGGTTTATGATAGCGTTGCTTTAGATTATTACTAGGTTGACTAATCAGGAGATTCCAAACCCATGTCCCTCTCCTTGTCCCCATGCACTCAATAACCAATTTACCTTTACTTGGCGTGCCTCACCAGTAGATTTTTAACACCCATTTTTTCCATCATAAAATCTGAATAAATCAGCTTGTGATTTCTAAACCCTTTTCACCATTAAGGCTTTCTCATCTTCTGCATCATAACATATGGCGCTGTGTGGTTGAATCTGAATCCGAGAAGCTTTTTCAGCTGTTTGCTCCGATCACCTGGGCTTGTTTGGTGTTTCTGCAGCTTTTCCTTTGTCCCTTACTCCCTTTTCTGGAATTGGACTGTGTCAACCACATATTGTATGCGTCTCCGAAGGTAAATGTTCTCATCTCTTCTTTCTTGCTAGATTTAATTTGTGAGATTACTTCAGGGCCTCAGTTTTGGTAGTAATTTTGTCGATTAGTGAAGTAAAGTAGATGGGTTTTTGACTTGTGGAAATAAACAAAACCCTTTTACTTTAATAGGCAATATCTTAAATGAATCTTCAATTTAGCTTAGATACCTTCCATTTTTCTTCTGTTTAACACGGAAGAATACTTTTAACCACACTATGCTTGGTGTGGACGTTTTCAGAATGCTTCCAATAGAATATGGACAAAAAGAACAAATCAAAAACCTTGTCGAGAATCCAGCAAATCAAGATTGGAAAGAAAAGAAAAGGGAAAATTGGACTTACAACGTGCATATTCCACATATGACTGTATTTCCCTTTGAGAGAAGAACCTAAAAGACCTTTCCTTCTGGAAAAGTAATGAGATAGGTTTCTGTAGCATTCCGTTTAACCCCATTTGTCTGTGAAAACGCAATCCTTGATTTATTGCTACGTCAGATTGCGAATAATCCATTGTGGGAAGGCATTTTCTCTTGTCTTATAAGTTATAACATGGATACTGGATTCTTTTCCACCAGGAGCGAACAGTTGCTTTTCACTTTTTCGGTGTTACCGTTCTCCTTTTCACTTGTTTAAAGTCCATATTCCTTTTTGCTACTTCAATTCGATCCTCCTGCTTTTTCCTCTCTTATCATCTATTCTTTTTGTAAATTTTAAAGTTTTGTTTCCTCTGTTTTTGTAATTGGGCCGATTGATGTTTGTTGTTTGGTTTTTAATGCAATGCTCCTGCATCAATAAAGTCTTGTCCTCCCTCATTTTTCTCCATTGCAACTTCTTCCAAGTTGGACGGTTTTGGCCATTGTCTTTCTAATTGATTTTAATTCTTCTTAGTGATGGATTGCTTAAATCCACATGTTTTTTTTTCCTTCTTTACTTAATGTTAGCTAACATTTCTGTAGAAAAAAGGCGATATGCGTTGCACACAACCACTATTACTGCCTCTGGCATTTAATTTGCAGTACATGCCATCACTGTATCCAATTATTCTATGCATTTTGTACTGTAGAGCACAGATAACTGCAATAGCAAGCTGTTGTCGGCTGTTCTTTTTCCTTATACCTCATTCAGTCAACGTAGTTGA

mRNA sequence

ATGGAAGAAGAATCAGCGGAGTTAGTGGGGGGAATCATGATGAAGGCTGCCATTGGCGATCTTTCAATCTCGAGAAGCACAGGGACCCAGCTTTCTCATCTTCTGCATCATAACATATGGCGCTGTGTGGTTGAATCTGAATCCGAGAAGCTTTTTCAGCTGTTTGCTCCGATCACCTGGGCTTGTTTGGTGTTTCTGCAGCTTTTCCTTTGTCCCTTACTCCCTTTTCTGGAATTGGACTGTGTCAACCACATATTGTATGCGTCTCCGAAGAGCACAGATAACTGCAATAGCAAGCTGTTGTCGGCTGTTCTTTTTCCTTATACCTCATTCAGTCAACGTAGTTGA

Coding sequence (CDS)

ATGGAAGAAGAATCAGCGGAGTTAGTGGGGGGAATCATGATGAAGGCTGCCATTGGCGATCTTTCAATCTCGAGAAGCACAGGGACCCAGCTTTCTCATCTTCTGCATCATAACATATGGCGCTGTGTGGTTGAATCTGAATCCGAGAAGCTTTTTCAGCTGTTTGCTCCGATCACCTGGGCTTGTTTGGTGTTTCTGCAGCTTTTCCTTTGTCCCTTACTCCCTTTTCTGGAATTGGACTGTGTCAACCACATATTGTATGCGTCTCCGAAGAGCACAGATAACTGCAATAGCAAGCTGTTGTCGGCTGTTCTTTTTCCTTATACCTCATTCAGTCAACGTAGTTGA

Protein sequence

MEEESAELVGGIMMKAAIGDLSISRSTGTQLSHLLHHNIWRCVVESESEKLFQLFAPITWACLVFLQLFLCPLLPFLELDCVNHILYASPKSTDNCNSKLLSAVLFPYTSFSQRS
Homology
[Close]
BLAST of Cla97C01G020720 vs. NCBI nr
Match: KGN49023.1 (hypothetical protein Csa_6G510900 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 2.3e-18
Identity = 53/72 (73.61%), Postives = 55/72 (76.39%), Query Frame = 0 

Query: 1  MEEESAELVGGIMMKAAIGDLSISRSTGTQLSHLLHHNIWRCVVESESEKLFQLFAPITW 60
          MEEESAELVGGIMMKAAIGDLSISR TGTQLSHLLHHNIWRCVVESES +LF  F     
Sbjct: 1  MEEESAELVGGIMMKAAIGDLSISRITGTQLSHLLHHNIWRCVVESESAELFSCFLRSPG 60

Query: 61 ACLVFLQLFLCP 73
            L F   +  P
Sbjct: 61 LVLCFCSFYCVP 72

[Close]
BLAST of Cla97C01G020720 vs. TrEMBL
Match: tr|A0A0A0KHN5|A0A0A0KHN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510900 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-18
Identity = 53/72 (73.61%), Postives = 55/72 (76.39%), Query Frame = 0 

Query: 1  MEEESAELVGGIMMKAAIGDLSISRSTGTQLSHLLHHNIWRCVVESESEKLFQLFAPITW 60
          MEEESAELVGGIMMKAAIGDLSISR TGTQLSHLLHHNIWRCVVESES +LF  F     
Sbjct: 1  MEEESAELVGGIMMKAAIGDLSISRITGTQLSHLLHHNIWRCVVESESAELFSCFLRSPG 60

Query: 61 ACLVFLQLFLCP 73
            L F   +  P
Sbjct: 61 LVLCFCSFYCVP 72

The following BLAST results are available for this feature:
BLAST of Cla97C01G020720 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49023.12.3e-1873.61hypothetical protein Csa_6G510900 [Cucumis sativus][more]
BLAST of Cla97C01G020720 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KHN5|A0A0A0KHN5_CUCSA1.5e-1873.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510900 PE=4 SV=1[more]
BLAST of Cla97C01G020720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C01G020720 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G020720.1Cla97C01G020720.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G020720Csa6G510900Cucumber (Chinese Long) v2cuwmbB412
Cla97C01G020720CsaV3_6G048140Cucumber (Chinese Long) v3cucwmbB430
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G020720Watermelon (97103) v2wmbwmbB001
Cla97C01G020720Silver-seed gourdcarwmbB0426
Cla97C01G020720Silver-seed gourdcarwmbB0669
Cla97C01G020720Cucumber (Gy14) v2cgybwmbB006
Cla97C01G020720Cucumber (Gy14) v2cgybwmbB394
Cla97C01G020720Cucumber (Gy14) v1cgywmbB017
Cla97C01G020720Cucurbita maxima (Rimu)cmawmbB402
Cla97C01G020720Cucurbita maxima (Rimu)cmawmbB670
Cla97C01G020720Cucurbita maxima (Rimu)cmawmbB875
Cla97C01G020720Cucurbita moschata (Rifu)cmowmbB642
Cla97C01G020720Cucurbita moschata (Rifu)cmowmbB849
Cla97C01G020720Wild cucumber (PI 183967)cpiwmbB005
Cla97C01G020720Wild cucumber (PI 183967)cpiwmbB433
Cla97C01G020720Cucumber (Chinese Long) v2cuwmbB005
Cla97C01G020720Bottle gourd (USVL1VR-Ls)lsiwmbB115
Cla97C01G020720Melon (DHL92) v3.6.1medwmbB505
Cla97C01G020720Melon (DHL92) v3.5.1mewmbB139
Cla97C01G020720Melon (DHL92) v3.5.1mewmbB513
Cla97C01G020720Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G020720Watermelon (Charleston Gray)wcgwmbB093
Cla97C01G020720Watermelon (97103) v1wmwmbB234
Cla97C01G020720Wax gourdwgowmbB402