Cla97C01G017720 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G017720
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	MADS box protein
Location	Cla97Chr01 : 31167630 .. 31171094 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAGAAAAAATCCAGATCAGGAAGATCGATAACGCCACGGCGAGGCAGGTCACTTTCTCCAAGCGTCGGAGGGGACTTTTTAAGAAAGCCAAAGAGCTTTCCGTTTTATGCGATGCCGATGTTGCCCTCATTATCTTCTCCGCCACCGGAAAGCTGTTTGAGTACTCAAGCTCAAGGTTTCTCTCTGCTTCTCTCTCTTTTTATATTTTATATTTTCCAGAAACAAAAACTTCAATCGGTTTCTCACGATTTCTGAGTTCTGCGTTTTTTGAACCTACTTTAGTTCCATTTACAAATGTTTCCGTGCTACTAAAAATGGAGAGAAGCTTGACAGAAATAAAGAGCAAGGCGCAGAAACCACGTGTATTTTGCTTACAACAATATTACGGAAAAAGATGAGAACAAATGAGAAAATATTAACTAATTCGATCATGGATATAAGATGAAATTCTTGTGAAGTAGTGCCTCATAAAATTTGTCATAAACAAGCAGAAAAGGATAAATGAAAACTTGCCCCGAGCCTCGCCCCCTCATCAACAACGAGGTTTATGGTAATAGTGATGACTCAACTTTTCAGTCACTCATTCTAACTTATTGCGGTTATTATAACCATGTTATGCTTGACTCTAGCTGATTTTGTTGATCTCTCTAAATTATATAGATTGAACATTGAAGTGACAAACATGGATTCATTGTCATTAATTTCTTTTGTTTAGTCATTTCTTCCATTGATTATAATACCATCTGTGTTTGACTTTCTGAAGCATGAAGGGAATCATAGAAAGACATAATTTGCACTCTAAGAACCTTCAGAAATTGGAACAACCATCCCTTGAACTACAGGTTTGGCGTTTTCTTCCAGGATTTTCCTCTAGAAAATGGTCATCATTTTTTTCCCCTAACTGTTATCAAAAGATGAAGATAATAATTATTATCGCAGCCGAAAACATGGTTCATAAATTTGTCATTTTAAACGGGAAGAATTTTTTATTTGTTTTAGGAACTCAAATTACTGCTGACGTGAAAACCCTGAAAAAACAATTATTCTTACATTGATTTTTATTATATAAAATAGAAATCAGTCTAAACATTTTTCTAAACAAGCACTGTGGAAAATTATTTTTCTCCTCCTGAAGTCTACTTTATCTCTGTTAAACTAGTAGTTGTTTTAAAGAACTCAACTTATTTTGATATCATATTTAACACTTTCATTCTCTATTTCTTAAATTTTGAAAAACTACTTCGAATCTCTAGAATTTCCATTTTAGATTCCAGCAAGCATATGGTCAAGAGTAGGGTAAAAGGTGTATATTTGGCCCAAGCTTATTTTTGTAAGACAATAAAATAATGCATTCGTCTTTCGTCGTGAACGGACAAAAATCAATATTACAAAGAGATCTTAAATAGTTGATTATATTTGTATCTTGAGGACTTTGATTATTTCAACTCAATGGCGGTCACCCTTTCATTAGTTTACTGAAACATTGTTTACAACTGTCAATGATTTCAGCTGGTTGAAAATAGCAATTACACCCGATTAAACAAGGAAATTGCTGACAAGACTCATCAGCTAAGGTATCTCTATTTTTACACGAGAAGTTGTGTTTTCTTTTATTTTTTCATTCACCACCATAGAAAGAGGTATAATTTGAATCTTCGATTTCAAGGAATTAAATTGAATTAGTATTAGCAATATTTGCCTGGGGCTACGCCCATTTTTTCACCCTACCCACCCTCACAACAGAAAGATGTAAAAGAAAAAGAAATTTGTCATAGAAAAAAAAGATAGGCGTAGGATAGATAGTTAGTCGGTATTTTTCAAATAGTACAAGTTTTCCGGATTAATTATGTGTTCTTTCTATTTTATAAACTAGAAAAAAATGACGTTTTATTTGATCCACTTAGATTAGTGAGCCAATTCCAATTTTGTATTTGAATACCATGTTGTAATTTGATTCTTGCACCTGAATAAATAGTGTAGTTGAGTACACCTTCAATTTGTCAAACCTTTTAAAAGATTTATAGGCTGTGAACACAGTTGAATGGGACTATTTTTATTGGTATTGGTTATCCAATATCGCTGGATACTTTTGGTTGCTAAATTTCAACCCTTTTTTTAGCATACTAATTGATTTTGTAGTTAGGTTTGGGTATTTTCATGATTAGGTTTGAACATTCCTTTGTCTGTTGGTTGTGTGGTTAGGTTCGAGTTTTTTCTTATTTATAATTAGTCATGTCTCTAACATGATTTTTAGTTTTGAGGAGGCATTCATTATAACATTTTATATAAAAGTTCAAACATTTAAATTGATGAAATTAAGAGATTAATCAAAATCAACTCACTCACCATAATGAAGGGTATACATTGATTTTTCTCCCTTGTACTTGCTAGATGCACAAGGGAAATGGTAGATATTTTGTTGTCACATTTCAGCGATTATCCAGACTACAATGGTCTAATTAGACAAAATTCTCACACTCATAGTACTACAATAAATCAGAGCACATACACAAACACGATTAAATTTGTTGATAATTTAGGCAGATGAGGGGAGAAGAACTCCAAACACTGAATATAGAGGAATTGCAGAAGCTAGAGAAGTCACTGGAGTCTGGATTGAGTCGTGTGATGGAGAAAAAGGTATTTTCCCTTTCTTCACCGTTTTCGTAATAAAATCCCATTTTCTTCTCATACACGATTCCGTTTTTATGTCCCAGGGTGAACGGATCATGAAAGAGATCACCGACCTTCAGAGAAAGGTTAAGTATCATCTTCAAATAAAGAAGACTATTGCCCAAAGACCCGTATTAGGAGAATCTAAGTACTTGATAATAGTATTGTATGTAATTTATACTCATAAATATATGATACAAAATGAACTTATAAATGCATTCATATGTAATCTATATTCAAACACGAACTTCTAGAAATATGACTAAAATTGCATTCATTTCTTTAAATGCGTCTATTACTCGTAAATATGTATGAATATGCTATTTAATTGCTTGTTATCAAACGAGGTGAAGCTAAATTCAAAGTTGTATGTGCATGCAGTCGGCCGAGTTGATGGATGAGAATAAGCGACTTAAACAACAAGTAAGAAGAGCCCTTTTCCACAGCACACTAATATAGGTTGTGTCCTTTGAATCCCTTTGTAACTTACAACCGCGGTGGTTTGCAGGCGGAGAAAATGAACGCCGTGAGGCACCTGGGCGTCGACCCCGAGATTTTGGTCGTGGAAGATGGCCAATCTTCGAACTCCGTCACTGAAGCTGGTGTCTCCAACTCCAATGGCCCGCCTCAAGATCTGGAAAGCTCAGACACATCTCTGAAATTAGGGTATCCTCATTGCATGAAAATTGATTTTACTTTATTTTCTAGTAATGTTTATTTAGACTGGTCAAGTTTTGTATGATCGAGTGAATCCAATTGGTTGCAGGCTGCCGTATTCCGGGTGA

mRNA sequence

ATGGCGAAAGAAAAAATCCAGATCAGGAAGATCGATAACGCCACGGCGAGGCAGGTCACTTTCTCCAAGCGTCGGAGGGGACTTTTTAAGAAAGCCAAAGAGCTTTCCGTTTTATGCGATGCCGATGTTGCCCTCATTATCTTCTCCGCCACCGGAAAGCTGTTTGAGTACTCAAGCTCAAGCATGAAGGGAATCATAGAAAGACATAATTTGCACTCTAAGAACCTTCAGAAATTGGAACAACCATCCCTTGAACTACAGCTGGTTGAAAATAGCAATTACACCCGATTAAACAAGGAAATTGCTGACAAGACTCATCAGCTAAGGCAGATGAGGGGAGAAGAACTCCAAACACTGAATATAGAGGAATTGCAGAAGCTAGAGAAGTCACTGGAGTCTGGATTGAGTCGTGTGATGGAGAAAAAGGGTGAACGGATCATGAAAGAGATCACCGACCTTCAGAGAAAGTCGGCCGAGTTGATGGATGAGAATAAGCGACTTAAACAACAAGCGGAGAAAATGAACGCCGTGAGGCACCTGGGCGTCGACCCCGAGATTTTGGTCGTGGAAGATGGCCAATCTTCGAACTCCGTCACTGAAGCTGGTGTCTCCAACTCCAATGGCCCGCCTCAAGATCTGGAAAGCTCAGACACATCTCTGAAATTAGGGCTGCCGTATTCCGGGTGA

Coding sequence (CDS)

ATGGCGAAAGAAAAAATCCAGATCAGGAAGATCGATAACGCCACGGCGAGGCAGGTCACTTTCTCCAAGCGTCGGAGGGGACTTTTTAAGAAAGCCAAAGAGCTTTCCGTTTTATGCGATGCCGATGTTGCCCTCATTATCTTCTCCGCCACCGGAAAGCTGTTTGAGTACTCAAGCTCAAGCATGAAGGGAATCATAGAAAGACATAATTTGCACTCTAAGAACCTTCAGAAATTGGAACAACCATCCCTTGAACTACAGCTGGTTGAAAATAGCAATTACACCCGATTAAACAAGGAAATTGCTGACAAGACTCATCAGCTAAGGCAGATGAGGGGAGAAGAACTCCAAACACTGAATATAGAGGAATTGCAGAAGCTAGAGAAGTCACTGGAGTCTGGATTGAGTCGTGTGATGGAGAAAAAGGGTGAACGGATCATGAAAGAGATCACCGACCTTCAGAGAAAGTCGGCCGAGTTGATGGATGAGAATAAGCGACTTAAACAACAAGCGGAGAAAATGAACGCCGTGAGGCACCTGGGCGTCGACCCCGAGATTTTGGTCGTGGAAGATGGCCAATCTTCGAACTCCGTCACTGAAGCTGGTGTCTCCAACTCCAATGGCCCGCCTCAAGATCTGGAAAGCTCAGACACATCTCTGAAATTAGGGCTGCCGTATTCCGGGTGA

Protein sequence

MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSSSMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTLNIEELQKLEKSLESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRHLGVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG

Homology

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BLAST of Cla97C01G017720 vs. NCBI nr
Match: XP_004143442.1 (PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis sativus] >XP_011657947.1 PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 2.4e-104
Identity = 222/228 (97.37%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS
Sbjct: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIA+KTHQLRQMRGEELQTXX
Sbjct: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIAEKTHQLRQMRGEELQTXX 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRHL 180
           XXXXXXXXXX ESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMN VRHL
Sbjct: 121 XXXXXXXXXXLESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNGVRHL 180

Query: 181 GVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
           GV+PEILVVEDGQSSNSVTE  VSNSNGPPQDLESSDTSLKLGLPYSG
Sbjct: 181 GVEPEILVVEDGQSSNSVTEVCVSNSNGPPQDLESSDTSLKLGLPYSG 228

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BLAST of Cla97C01G017720 vs. NCBI nr
Match: XP_008440538.1 (PREDICTED: MADS-box protein SVP-like [Cucumis melo] >XP_008440540.1 PREDICTED: MADS-box protein SVP-like [Cucumis melo])

HSP 1 Score: 386.7 bits (992), Expect = 5.4e-104
Identity = 221/228 (96.93%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS
Sbjct: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIA+KTHQLRQMRGEELQTXX
Sbjct: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIAEKTHQLRQMRGEELQTXX 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRHL 180
           XXXXXXXXXX ESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMN VRHL
Sbjct: 121 XXXXXXXXXXLESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNGVRHL 180

Query: 181 GVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
           GV+PEILVVEDGQSSNSVTE  VSNSNGPPQDLESSDTSLKLGLPY+G
Sbjct: 181 GVEPEILVVEDGQSSNSVTEVCVSNSNGPPQDLESSDTSLKLGLPYTG 228

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BLAST of Cla97C01G017720 vs. NCBI nr
Match: XP_022962900.1 (MADS-box protein JOINTLESS-like [Cucurbita moschata] >XP_022962901.1 MADS-box protein JOINTLESS-like [Cucurbita moschata])

HSP 1 Score: 366.3 bits (939), Expect = 7.5e-98
Identity = 199/228 (87.28%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFS TGKLFEYSSS
Sbjct: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSTTGKLFEYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIA+KTHQLRQMRGEELQT  
Sbjct: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIAEKTHQLRQMRGEELQTLN 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRHL 180
                      E GLSRVMEKKGE+IMKEITDLQRKSAEL++ENKRLK+QAEKM+ VR+ 
Sbjct: 121 IDELQQLEKSLEFGLSRVMEKKGEKIMKEITDLQRKSAELVEENKRLKKQAEKMDGVRNF 180

Query: 181 GVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
           GV+PEILVVEDGQSSNSVTEA V+NSNGP QDLESSDTSLKLGL YSG
Sbjct: 181 GVEPEILVVEDGQSSNSVTEACVTNSNGPAQDLESSDTSLKLGLAYSG 228

[Close]

BLAST of Cla97C01G017720 vs. NCBI nr
Match: XP_023003989.1 (MADS-box protein JOINTLESS-like [Cucurbita maxima])

HSP 1 Score: 366.3 bits (939), Expect = 7.5e-98
Identity = 198/228 (86.84%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFS TGKLFEYSSS
Sbjct: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSTTGKLFEYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMKGIIERHNLHSKNLQKLE+PSLELQLVENSNYTRLNKEIA+KTHQLRQMRGEELQT  
Sbjct: 61  SMKGIIERHNLHSKNLQKLERPSLELQLVENSNYTRLNKEIAEKTHQLRQMRGEELQTLN 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRHL 180
                      E GLSRVMEKKGE+IMKEITDLQRKSAEL++ENKRLK+QAEKM+ VRH 
Sbjct: 121 TDELQQLEKSLEFGLSRVMEKKGEKIMKEITDLQRKSAELVEENKRLKKQAEKMDGVRHF 180

Query: 181 GVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
           GV+PEI+VVEDGQSSNSVTEA V+NSNGP QDLESSDTSLKLGL YSG
Sbjct: 181 GVEPEIVVVEDGQSSNSVTEACVTNSNGPAQDLESSDTSLKLGLAYSG 228

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BLAST of Cla97C01G017720 vs. NCBI nr
Match: XP_023517620.1 (MADS-box protein JOINTLESS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.2 bits (936), Expect = 1.7e-97
Identity = 198/228 (86.84%), Postives = 208/228 (91.23%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFS TGKLFEYSSS
Sbjct: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSTTGKLFEYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIA+KTHQLRQMRGEELQT  
Sbjct: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIAEKTHQLRQMRGEELQTLN 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRHL 180
                      E GLSRVMEKKGE+IMKEITDLQRKSAEL++ENKRLK+QAEKM+ VR+ 
Sbjct: 121 IDELQQLEKSLEFGLSRVMEKKGEKIMKEITDLQRKSAELVEENKRLKKQAEKMDGVRNF 180

Query: 181 GVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
           GV+PEIL+VEDGQSSNSVTEA V+NSNGP QDLESSDTSLKLGL YSG
Sbjct: 181 GVEPEILLVEDGQSSNSVTEACVTNSNGPAQDLESSDTSLKLGLAYSG 228

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BLAST of Cla97C01G017720 vs. TrEMBL
Match: tr|A0A1S3B1C2|A0A1S3B1C2_CUCME (MADS-box protein SVP-like OS=Cucumis melo OX=3656 GN=LOC103484931 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.5e-104
Identity = 221/228 (96.93%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS
Sbjct: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIA+KTHQLRQMRGEELQTXX
Sbjct: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIAEKTHQLRQMRGEELQTXX 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRHL 180
           XXXXXXXXXX ESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMN VRHL
Sbjct: 121 XXXXXXXXXXLESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNGVRHL 180

Query: 181 GVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
           GV+PEILVVEDGQSSNSVTE  VSNSNGPPQDLESSDTSLKLGLPY+G
Sbjct: 181 GVEPEILVVEDGQSSNSVTEVCVSNSNGPPQDLESSDTSLKLGLPYTG 228

[Close]

BLAST of Cla97C01G017720 vs. TrEMBL
Match: tr|A0A2P4NAM0|A0A2P4NAM0_QUESU (Mads-box protein svp OS=Quercus suber OX=58331 GN=CFP56_41106 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 8.8e-79
Identity = 165/229 (72.05%), Postives = 191/229 (83.41%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+EKIQI+KIDNATARQVTFSKRRRGLFKKA+ELSVLCDADVALIIFS+TGKLFEYSSS
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMK I+ERHNLHSKNL+KL+QPSLELQLVENSN++RL+KEI +K+HQLRQMRGEELQ   
Sbjct: 61  SMKEILERHNLHSKNLEKLDQPSLELQLVENSNHSRLSKEITEKSHQLRQMRGEELQGLN 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQ-AEKMNAVRH 180
                      ESGLSRV+E+KGE+IM+EI DLQRK  +LM+EN+RL+QQ  +  N  RH
Sbjct: 121 VEELQQLERSLESGLSRVIERKGEKIMREINDLQRKGMQLMEENERLRQQVVDISNGRRH 180

Query: 181 LGVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
           +G + E L+ E+GQSS SVT   V NS G P D +SSDTSLKLGLPYSG
Sbjct: 181 IGTESENLIAEEGQSSESVT--NVCNSTGAPHDYDSSDTSLKLGLPYSG 227

[Close]

BLAST of Cla97C01G017720 vs. TrEMBL
Match: tr|A0A2I4DHY0|A0A2I4DHY0_9ROSI (MADS-box protein JOINTLESS isoform X2 OS=Juglans regia OX=51240 GN=LOC108980328 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 6.3e-77
Identity = 165/230 (71.74%), Postives = 191/230 (83.04%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           M +EKIQI+KIDNATARQVTFSKRRRGLFKKA+ELSVLCDADVALIIFS+TGKLFEYSSS
Sbjct: 1   MVREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           S+K I+ERH+LHSKNL KL+QPSLELQLVENSNY+RL+KEIA+K+HQLRQMRGEELQ   
Sbjct: 61  SIKEILERHHLHSKNLGKLDQPSLELQLVENSNYSRLSKEIAEKSHQLRQMRGEELQGLN 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLK-QQAEKMNAVRH 180
                      E+GLSRV+EKKGE+IM EI+DLQ+K  +LM+EN+RL+ Q AE  N  RH
Sbjct: 121 IEELQQLEKSLEAGLSRVIEKKGEKIMTEISDLQKKGMQLMEENERLRLQVAEISNGRRH 180

Query: 181 LGVDPEILVVEDGQSSNSVTEAGVSNSNG-PPQDLESSDTSLKLGLPYSG 229
           +G D E ++ E+GQSS SVT   V NS G PP D ESSDTSLKLGLPY+G
Sbjct: 181 IGADSENVIAEEGQSSESVT--NVCNSTGAPPHDYESSDTSLKLGLPYAG 228

[Close]

BLAST of Cla97C01G017720 vs. TrEMBL
Match: tr|A0A2I4QQS2|A0A2I4QQS2_HEVBR (HbMADS-box protein OS=Hevea brasiliensis OX=3981 GN=SVP2 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.1e-76
Identity = 162/229 (70.74%), Postives = 189/229 (82.53%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+EKIQI+KIDNATARQVTFSKRRRGLFKKA+ELSVLCDADVALI+FS+TGKLFEY SS
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLFEYCSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMK I+E+H+LHSKNL+KLEQPSLELQLVE+SN++RL+KEIA+K+HQLRQMRGEELQ   
Sbjct: 61  SMKEILEKHDLHSKNLEKLEQPSLELQLVEDSNHSRLSKEIAEKSHQLRQMRGEELQGLN 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQ-AEKMNAVRH 180
                      E+GLSRV+EKKGE+I+KEI +LQ K  +LM+EN+RL+QQ  E  N  + 
Sbjct: 121 IEELQQLEKSLEAGLSRVIEKKGEKIIKEIRELQTKGMQLMEENERLRQQVVEISNGRKQ 180

Query: 181 LGVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
              D E LV E+GQSS SVT   V NSNGPP D ESSDTSLKLGLPY+G
Sbjct: 181 AAADSENLVYEEGQSSESVT--NVCNSNGPPHDYESSDTSLKLGLPYNG 227

[Close]

BLAST of Cla97C01G017720 vs. TrEMBL
Match: tr|A0A1B2LP70|A0A1B2LP70_MALDO (JOINTLESS-like protein OS=Malus domestica OX=3750 GN=Ja PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 9.1e-76
Identity = 163/229 (71.18%), Postives = 187/229 (81.66%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+EKIQI+KIDNATARQVTFSKRRRGL KKA+ELSVLCDAD+ALIIFS+TGKLFEY+SS
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLLKKAEELSVLCDADIALIIFSSTGKLFEYASS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMK I+ERHNLHSKNL+KLEQPSL+LQLVENSNYTRL+KEIA K+HQLRQMRGEE+Q   
Sbjct: 61  SMKEILERHNLHSKNLEKLEQPSLQLQLVENSNYTRLSKEIAAKSHQLRQMRGEEIQGLN 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQ-AEKMNAVRH 180
                      E+GL RV+EKK E+IMKEI DLQR   +LM+EN+RL+QQ AEK +  R 
Sbjct: 121 LEELQQLEKSLETGLGRVIEKKSEKIMKEIGDLQRNGMQLMEENERLRQQVAEKSDGRRL 180

Query: 181 LGVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPYSG 229
           + VD E +  E+GQSS SVT     NSN  PQD +SSDTSLKLGLPYSG
Sbjct: 181 VQVDSENMFTEEGQSSESVTNP--CNSNNGPQDYDSSDTSLKLGLPYSG 227

[Close]

BLAST of Cla97C01G017720 vs. Swiss-Prot
Match: sp|Q9FVC1|SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-62
Identity = 143/242 (59.09%), Postives = 168/242 (69.42%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+EKIQIRKIDNATARQVTFSKRRRGLFKKA+ELSVLCDADVALIIFS+TGKLFE+ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMK ++ERHNL SKNL+KL+QPSLELQLVENS++ R++KEIADK+H+LRQMRGEELQ   
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKM------ 180
                      E+GL+RV+E K ++IM EI++L                           
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 -------NAVRHLGVDPE-ILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPY 229
                  N   H G + E   V E+GQSS S+T AG  NS G P D ESSDTSL+LGLPY
Sbjct: 181 XXXXICNNVHAHGGAESENAAVYEEGQSSESITNAG--NSTGAPVDSESSDTSLRLGLPY 240

[Close]

BLAST of Cla97C01G017720 vs. Swiss-Prot
Match: sp|Q9FUY6|JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.3e-58
Identity = 119/165 (72.12%), Postives = 144/165 (87.27%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+EKIQI+KIDN+TARQVTFSKRRRGLFKKA+ELSVLCDADVALIIFS+TGKLF+YSSS
Sbjct: 1   MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMK I+ER +LHSKNL+KL+QPSLELQLVENSNY+RL+KEI++K+H+LRQMRGEELQ   
Sbjct: 61  SMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLN 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENK 166
                      E+GLSRV+E+KG++IM+EI  LQ+K   LM+EN+
Sbjct: 121 IEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENE 165

[Close]

BLAST of Cla97C01G017720 vs. Swiss-Prot
Match: sp|O82794|AGL24_ARATH (MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.5e-52
Identity = 122/226 (53.98%), Postives = 160/226 (70.80%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+EKI+I+KIDN TARQVTFSKRRRG+FKKA ELSVLCDADVALIIFSATGKLFE+SSS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMKGIIERHNLHSKNLQKL-EQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTX 120
            M+ I+ R++LH+ N+ KL + PS  L+L EN N +RL+KE+ DKT QLR++RGE+L   
Sbjct: 61  RMRDILGRYSLHASNINKLMDPPSTHLRL-ENCNLSRLSKEVEDKTKQLRKLRGEDLDGL 120

Query: 121 XXXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRH 180
                       ESGLSRV EKKGE +M +I  L+++ +EL+DENKRL+ + E +   + 
Sbjct: 121 NLEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETLERAK- 180

Query: 181 LGVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLP 226
                 +  +++   + SVT    S  +G P + + SDTSLKLGLP
Sbjct: 181 ------LTTLKEALETESVTTNVSSYDSGTPLE-DDSDTSLKLGLP 217

[Close]

BLAST of Cla97C01G017720 vs. Swiss-Prot
Match: sp|Q5K4R0|MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS47 PE=1 SV=2)

HSP 1 Score: 195.7 bits (496), Expect = 5.7e-49
Identity = 118/226 (52.21%), Postives = 159/226 (70.35%), Query Frame = 0


Query: 3   KEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSSSM 62
           +E+I IR+IDN  ARQVTFSKRRRGLFKKA+ELS+LCDA+V L++FSATGKLF+++S+SM
Sbjct: 22  RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81

Query: 63  KGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXXXX 122
           + II+R+N HSK LQ+ E   L+LQ  ++S   RL +E+A+ + +LRQMRGEEL      
Sbjct: 82  EQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVE 141

Query: 123 XXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAE--KMNAVRHL 182
                    ESGL  V++ K ++I+ EI  L+RK  +L++EN RLK+Q +  +M+ +  +
Sbjct: 142 QLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEEM 201

Query: 183 --GVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGL 225
             G D EI V E+GQSS SVT A  S    PP +  SSDTSLKLGL
Sbjct: 202 QPGPDSEI-VYEEGQSSESVTNA--SYPRPPPDNDYSSDTSLKLGL 244

[Close]

BLAST of Cla97C01G017720 vs. Swiss-Prot
Match: sp|Q9XJ66|MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS22 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.3e-44
Identity = 113/225 (50.22%), Postives = 147/225 (65.33%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+E+ +I++I++A ARQVTFSKRRRGLFKKA+ELSVLCDADVALI+FS+TGKL  ++SS
Sbjct: 1   MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SM  II+++N HS NL K EQPSL+L L E+S Y  LN+++A+ + +LRQMRGEEL+   
Sbjct: 61  SMNEIIDKYNTHSNNLGKAEQPSLDLNL-EHSKYAHLNEQLAEASLRLRQMRGEELEGLS 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRHL 180
                      E+GL RVM  K ++ M++I++LQRKS                       
Sbjct: 121 IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSXXXXXXXXXXXXXXXXXXXXXXQ 180

Query: 181 GVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLP 226
            VD E  V E GQSS SV  A  S S+    + + SD SLKLGLP
Sbjct: 181 VVDTENFVTE-GQSSESVMTALHSGSSQSQDNDDGSDVSLKLGLP 223

[Close]

BLAST of Cla97C01G017720 vs. TAIR10
Match: AT2G22540.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 240.4 bits (612), Expect = 1.1e-63
Identity = 143/242 (59.09%), Postives = 168/242 (69.42%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+EKIQIRKIDNATARQVTFSKRRRGLFKKA+ELSVLCDADVALIIFS+TGKLFE+ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMK ++ERHNL SKNL+KL+QPSLELQLVENS++ R++KEIADK+H+LRQMRGEELQ   
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKM------ 180
                      E+GL+RV+E K ++IM EI++L                           
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 -------NAVRHLGVDPE-ILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLPY 229
                  N   H G + E   V E+GQSS S+T AG  NS G P D ESSDTSL+LGLPY
Sbjct: 181 XXXXICNNVHAHGGAESENAAVYEEGQSSESITNAG--NSTGAPVDSESSDTSLRLGLPY 240

[Close]

BLAST of Cla97C01G017720 vs. TAIR10
Match: AT4G24540.1 (AGAMOUS-like 24)

HSP 1 Score: 205.7 bits (522), Expect = 3.1e-53
Identity = 122/226 (53.98%), Postives = 160/226 (70.80%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           MA+EKI+I+KIDN TARQVTFSKRRRG+FKKA ELSVLCDADVALIIFSATGKLFE+SSS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMKGIIERHNLHSKNLQKL-EQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTX 120
            M+ I+ R++LH+ N+ KL + PS  L+L EN N +RL+KE+ DKT QLR++RGE+L   
Sbjct: 61  RMRDILGRYSLHASNINKLMDPPSTHLRL-ENCNLSRLSKEVEDKTKQLRKLRGEDLDGL 120

Query: 121 XXXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQAEKMNAVRH 180
                       ESGLSRV EKKGE +M +I  L+++ +EL+DENKRL+ + E +   + 
Sbjct: 121 NLEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETLERAK- 180

Query: 181 LGVDPEILVVEDGQSSNSVTEAGVSNSNGPPQDLESSDTSLKLGLP 226
                 +  +++   + SVT    S  +G P + + SDTSLKLGLP
Sbjct: 181 ------LTTLKEALETESVTTNVSSYDSGTPLE-DDSDTSLKLGLP 217

[Close]

BLAST of Cla97C01G017720 vs. TAIR10
Match: AT3G30260.1 (AGAMOUS-like 79)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24
Identity = 67/172 (38.95%), Postives = 106/172 (61.63%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSS- 60
           M + ++Q+R+I+N   RQVTFSKRR GL KKA+E+SVLCDA+VALI+FS  GKLFEYS+ 
Sbjct: 1   MGRGRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAG 60

Query: 61  SSMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTX 120
           SSM+ I++R+   +   Q +  P+L+ Q   ++  ++L + I      LR +RGEE+   
Sbjct: 61  SSMERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGL 120

Query: 121 XXXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRLKQQA 172
                       ++ L +   +K + +++ I  LQ+K  EL +  K+L ++A
Sbjct: 121 SIRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKA 172

[Close]

BLAST of Cla97C01G017720 vs. TAIR10
Match: AT4G37940.1 (AGAMOUS-like 21)

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-24
Identity = 64/153 (41.83%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           M + KI I++ID++T+RQVTFSKRR+GL KKAKEL++LCDA+V LIIFS+TGKL++++SS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIADKTHQLRQMRGEELQTXX 120
           SMK +I+R+N      Q+L  P+ E++  +      L +E+       RQM GE+L    
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAV-LRQELHALQENHRQMMGEQLNGLS 120

Query: 121 XXXXXXXXXXXESGLSRVMEKKGERIMKEITDL 154
                      E  L  +  +K + + +EI +L
Sbjct: 121 VNELNSLENQIEISLRGIRMRKEQLLTQEIQEL 152

[Close]

BLAST of Cla97C01G017720 vs. TAIR10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-24
Identity = 70/182 (38.46%), Postives = 105/182 (57.69%), Query Frame = 0


Query: 1   MAKEKIQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIIFSATGKLFEYSSS 60
           M + ++++++I+N   RQVTFSKRR GL KKA+E+SVLCDA+V+LI+FS  GKLFEYSS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60

Query: 61  S-MKGIIERHNLHSKNLQKLEQPSLELQLVEN--SNYTRLNKEIADKTHQLRQMRGEELQ 120
           S M+ ++ER+  +S   ++L  P   +    N    Y+RL  +I       R   GEEL+
Sbjct: 61  SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE 120

Query: 121 TXXXXXXXXXXXXXESGLSRVMEKKGERIMKEITDLQRKSAELMDENKRL-KQQAEKMNA 179
                         E+ L  +  +K + + + +  LQRK  E+ +EN  L KQ  E+ N 
Sbjct: 121 PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI 180

The following BLAST results are available for this feature:

BLAST of Cla97C01G017720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143442.1	2.4e-104	97.37	PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis sativus] >XP_011657947....	[more]
XP_008440538.1	5.4e-104	96.93	PREDICTED: MADS-box protein SVP-like [Cucumis melo] >XP_008440540.1 PREDICTED: M...	[more]
XP_022962900.1	7.5e-98	87.28	MADS-box protein JOINTLESS-like [Cucurbita moschata] >XP_022962901.1 MADS-box pr...	[more]
XP_023003989.1	7.5e-98	86.84	MADS-box protein JOINTLESS-like [Cucurbita maxima]	[more]
XP_023517620.1	1.7e-97	86.84	MADS-box protein JOINTLESS-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C01G017720 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B1C2\|A0A1S3B1C2_CUCME	3.5e-104	96.93	MADS-box protein SVP-like OS=Cucumis melo OX=3656 GN=LOC103484931 PE=4 SV=1	[more]
tr\|A0A2P4NAM0\|A0A2P4NAM0_QUESU	8.8e-79	72.05	Mads-box protein svp OS=Quercus suber OX=58331 GN=CFP56_41106 PE=4 SV=1	[more]
tr\|A0A2I4DHY0\|A0A2I4DHY0_9ROSI	6.3e-77	71.74	MADS-box protein JOINTLESS isoform X2 OS=Juglans regia OX=51240 GN=LOC108980328 ...	[more]
tr\|A0A2I4QQS2\|A0A2I4QQS2_HEVBR	4.1e-76	70.74	HbMADS-box protein OS=Hevea brasiliensis OX=3981 GN=SVP2 PE=2 SV=1	[more]
tr\|A0A1B2LP70\|A0A1B2LP70_MALDO	9.1e-76	71.18	JOINTLESS-like protein OS=Malus domestica OX=3750 GN=Ja PE=2 SV=1	[more]

BLAST of Cla97C01G017720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FVC1\|SVP_ARATH	2.0e-62	59.09	MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1	[more]
sp\|Q9FUY6\|JOIN_SOLLC	2.3e-58	72.12	MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1	[more]
sp\|O82794\|AGL24_ARATH	5.5e-52	53.98	MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1	[more]
sp\|Q5K4R0\|MAD47_ORYSJ	5.7e-49	52.21	MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
sp\|Q9XJ66\|MAD22_ORYSJ	3.3e-44	50.22	MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]

BLAST of Cla97C01G017720 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22540.1	1.1e-63	59.09	K-box region and MADS-box transcription factor family protein	[more]
AT4G24540.1	3.1e-53	53.98	AGAMOUS-like 24	[more]
AT3G30260.1	2.3e-24	38.95	AGAMOUS-like 79	[more]
AT4G37940.1	3.9e-24	41.83	AGAMOUS-like 21	[more]
AT1G26310.1	5.1e-24	38.46	K-box region and MADS-box transcription factor family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding
GO:0046983	protein dimerization activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR033896	MADS_MEF2-like
IPR002487	TF_Kbox
IPR036879	TF_MADSbox_sf
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0048827	phyllome development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0070727	cellular macromolecule localization
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0071229	cellular response to acid chemical
biological_process	GO:0071310	cellular response to organic substance
biological_process	GO:1901701	cellular response to oxygen-containing compound
biological_process	GO:0045087	innate immune response
biological_process	GO:0010073	meristem maintenance
biological_process	GO:2000113	negative regulation of cellular macromolecule biosynthetic process
biological_process	GO:0051093	negative regulation of developmental process
biological_process	GO:0010629	negative regulation of gene expression
biological_process	GO:0051172	negative regulation of nitrogen compound metabolic process
biological_process	GO:0006796	phosphate-containing compound metabolic process
biological_process	GO:0032268	regulation of cellular protein metabolic process
biological_process	GO:0048438	floral whorl development
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0051707	response to other organism
biological_process	GO:0007165	signal transduction
biological_process	GO:0006508	proteolysis
biological_process	GO:0010077	maintenance of inflorescence meristem identity
biological_process	GO:0000060	protein import into nucleus, translocation
biological_process	GO:0048510	regulation of timing of transition from vegetative to reproductive phase
biological_process	GO:0048519	negative regulation of biological process
biological_process	GO:2000112	regulation of cellular macromolecule biosynthetic process
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0051171	regulation of nitrogen compound metabolic process
biological_process	GO:0080090	regulation of primary metabolic process
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016043	cellular component organization
biological_process	GO:0048869	cellular developmental process
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0052543	callose deposition in cell wall
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0010076	maintenance of floral meristem identity
biological_process	GO:0009556	microsporogenesis
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0009910	negative regulation of flower development
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0048481	plant ovule development
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0009617	response to bacterium
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006417	regulation of translation
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0006612	protein targeting to membrane
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000900	translation repressor activity, nucleic acid binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008134	transcription factor binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G017720.1	Cla97C01G017720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..141
None	No IPR available	COILS	Coil	Coil	coord: 143..177
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..228
None	No IPR available	PANTHER	PTHR11945:SF179	MADS-BOX PROTEIN SVP	coord: 1..228
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..228
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 52.46 coord: 38..59 score: 62.84 coord: 23..38 score: 77.22
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 3.0E-38 score: 143.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.8E-25 score: 88.0
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 29.829
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	G3DSA:3.40.1810.10		coord: 13..77 e-value: 1.3E-29 score: 103.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	SSF55455	SRF-like	coord: 3..85
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 92..171 e-value: 4.7E-16 score: 58.7
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 87..177 score: 13.045
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..77 e-value: 2.8581E-39 score: 131.135

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G017720	Cla014105	Watermelon (97103) v1	wmwmbB234
Cla97C01G017720	Csa6G499000	Cucumber (Chinese Long) v2	cuwmbB412
Cla97C01G017720	MELO3C007716	Melon (DHL92) v3.5.1	mewmbB513
Cla97C01G017720	ClCG01G018380	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G017720	CSPI06G29810	Wild cucumber (PI 183967)	cpiwmbB433
Cla97C01G017720	Cucsa.104010	Cucumber (Gy14) v1	cgywmbB127
Cla97C01G017720	CmaCh03G008420	Cucurbita maxima (Rimu)	cmawmbB670
Cla97C01G017720	CmaCh07G005700	Cucurbita maxima (Rimu)	cmawmbB875
Cla97C01G017720	CmaCh12G001980	Cucurbita maxima (Rimu)	cmawmbB165
Cla97C01G017720	CmoCh03G008810	Cucurbita moschata (Rifu)	cmowmbB642
Cla97C01G017720	CmoCh12G001510	Cucurbita moschata (Rifu)	cmowmbB150
Cla97C01G017720	CmoCh07G005760	Cucurbita moschata (Rifu)	cmowmbB849
Cla97C01G017720	Lsi01G008090	Bottle gourd (USVL1VR-Ls)	lsiwmbB115
Cla97C01G017720	CsGy6G029290	Cucumber (Gy14) v2	cgybwmbB394
Cla97C01G017720	MELO3C007716.2	Melon (DHL92) v3.6.1	medwmbB505
Cla97C01G017720	Carg15969	Silver-seed gourd	carwmbB0791
Cla97C01G017720	CsaV3_6G045010	Cucumber (Chinese Long) v3	cucwmbB430
Cla97C01G017720	Bhi03G001351	Wax gourd	wgowmbB400

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla97C01G017720	Cla97C08G154760	Watermelon (97103) v2	wmbwmbB040

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G017720	Watermelon (97103) v2	wmbwmbB005
Cla97C01G017720	Watermelon (97103) v2	wmbwmbB041
Cla97C01G017720	Silver-seed gourd	carwmbB0056
Cla97C01G017720	Silver-seed gourd	carwmbB0426
Cla97C01G017720	Silver-seed gourd	carwmbB0655
Cla97C01G017720	Cucumber (Gy14) v2	cgybwmbB093
Cla97C01G017720	Cucumber (Gy14) v2	cgybwmbB173
Cla97C01G017720	Cucumber (Gy14) v1	cgywmbB272
Cla97C01G017720	Cucumber (Gy14) v1	cgywmbB537
Cla97C01G017720	Cucurbita maxima (Rimu)	cmawmbB162
Cla97C01G017720	Cucurbita maxima (Rimu)	cmawmbB801
Cla97C01G017720	Cucurbita moschata (Rifu)	cmowmbB003
Cla97C01G017720	Cucurbita moschata (Rifu)	cmowmbB146
Cla97C01G017720	Cucurbita moschata (Rifu)	cmowmbB775
Cla97C01G017720	Wild cucumber (PI 183967)	cpiwmbB101
Cla97C01G017720	Wild cucumber (PI 183967)	cpiwmbB183
Cla97C01G017720	Cucumber (Chinese Long) v3	cucwmbB103
Cla97C01G017720	Cucumber (Chinese Long) v3	cucwmbB181
Cla97C01G017720	Cucumber (Chinese Long) v2	cuwmbB099
Cla97C01G017720	Cucumber (Chinese Long) v2	cuwmbB180
Cla97C01G017720	Bottle gourd (USVL1VR-Ls)	lsiwmbB259
Cla97C01G017720	Bottle gourd (USVL1VR-Ls)	lsiwmbB424
Cla97C01G017720	Melon (DHL92) v3.6.1	medwmbB260
Cla97C01G017720	Melon (DHL92) v3.6.1	medwmbB303
Cla97C01G017720	Melon (DHL92) v3.5.1	mewmbB275
Cla97C01G017720	Melon (DHL92) v3.5.1	mewmbB314
Cla97C01G017720	Watermelon (Charleston Gray)	wcgwmbB060
Cla97C01G017720	Watermelon (Charleston Gray)	wcgwmbB316
Cla97C01G017720	Watermelon (97103) v1	wmwmbB080
Cla97C01G017720	Watermelon (97103) v1	wmwmbB355
Cla97C01G017720	Wax gourd	wgowmbB553