Cla97C01G016590 (gene) Watermelon (97103) v2

NameCla97C01G016590
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr01 : 30296470 .. 30297646 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTTTTGGCGAAGGCCCACATCGTACGGTCCTTAAAGTGTAAGGGAACGCGCAAGGCTTTATCCTCACCAGAATCACATTCTTAATAAACAAAAATTTTTTATCCATTTTCTAAAGGTTTGATCTCCTGGCTGGAAGAAGCGGCGGCGGCAGGATCCACTTCTTCTAGTATGTGGTGTGTGTATTTTTTTAATTAAGGTTTTGGAGTATTTTTGCCTACCAATTTGTAAGATTTCTAAATGGTGGTGATTTGAAAGATAAGTTGGGGATTTGAAGAATTTGTATATTTATGTATAGTTCAGTTGACAATTTTCTAGTACTATCGTATTTTTATTTGCATGAGTTGATATAGTTTTTAGTTATTACATGGTATTTGTGTGGGTTTTTTTTTTTTATCCTGTGTGACAAAATATGACAACAATTCTAGCTAATACAAGGCATTTGCATGACTTGTACCAATGAAGATTGAAGTTGCCCTTAGTATGTGTAACAACAAATGAGGAAGATTTTAACTGTTTATTAATAATAAGGGTATTTGTTGAGCTTAGTACGAGGCTAACTTCATAATACAAGGTATTTGTTTATTTTGTGCTTATAACTAAATATATTTTATGATTAAAGTTAATTTTGTTGGTGAATACTAGTATATAAAGGTATAACTTATGTAGTTTCAACCATTCATTTATAATTATGATTTGCATATTTTGTAGTTATAGGATAGTTTTGTTAAATGATATTAGTTTTATATATTATTTTATAAGAAGTTAGGTTTTTAGTTTTATTTGTTTCACAATATGTATATTCGAGATTTAAATTTAGGATATTTGAAGCGGTTTAGTTTAATAGATTTGTTAGAATTGTTTGAAATACACCATATTTATAGGAATTTGAGAGTAGGGGTATTTTTGTCTATTACTATATCTTAAATAGTATTAAAATTAGTAGTTTGACCATATTCCAAGAAAGATTTCTGCTTAGTCATTTTTCTAAGATGTCATTCTATTTCGGCCATTTGTCCAATCGCCCTAGTATATTAGACCAGCCTGTTTCAAGCAAGGCGTTGGGCCGTGTGGTTTGGGGTAAAGCCCACATAGAACGGCCCCTAAAGCGTAAGGGAACGCGTCAGTCTGGGCTTAATAACAGAGCAACGATAACCTCCCGCTCTTTGCAGTGA

mRNA sequence

ATGTGGTTTTGGCGAAGGCCCACATCGTACGGTTTGATCTCCTGGCTGGAAGAAGCGGCGGCGGCAGGATCCACTTCTTCTAAAAGATTTCTGCTTAGTCATTTTTCTAAGATGTCATTCTATTTCGGCCATTTGTCCAATCGCCCTAGTATATTAGACCAGCCTGTTTCAAGCAAGGCGTTGGGCCGTGTGGTTTGGGGTAAAGCCCACATAGAACGGCCCCTAAAGCGTAAGGGAACGCGTCAGTCTGGGCTTAATAACAGAGCAACGATAACCTCCCGCTCTTTGCAGTGA

Coding sequence (CDS)

ATGTGGTTTTGGCGAAGGCCCACATCGTACGGTTTGATCTCCTGGCTGGAAGAAGCGGCGGCGGCAGGATCCACTTCTTCTAAAAGATTTCTGCTTAGTCATTTTTCTAAGATGTCATTCTATTTCGGCCATTTGTCCAATCGCCCTAGTATATTAGACCAGCCTGTTTCAAGCAAGGCGTTGGGCCGTGTGGTTTGGGGTAAAGCCCACATAGAACGGCCCCTAAAGCGTAAGGGAACGCGTCAGTCTGGGCTTAATAACAGAGCAACGATAACCTCCCGCTCTTTGCAGTGA

Protein sequence

MWFWRRPTSYGLISWLEEAAAAGSTSSKRFLLSHFSKMSFYFGHLSNRPSILDQPVSSKALGRVVWGKAHIERPLKRKGTRQSGLNNRATITSRSLQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G016590.1Cla97C01G016590.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..97

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G016590Wax gourdwgowmbB285
Cla97C01G016590Wax gourdwgowmbB397
Cla97C01G016590Watermelon (97103) v2wmbwmbB038
Cla97C01G016590Silver-seed gourdcarwmbB0002
Cla97C01G016590Silver-seed gourdcarwmbB0426
Cla97C01G016590Cucumber (Gy14) v2cgybwmbB092
Cla97C01G016590Cucumber (Gy14) v2cgybwmbB394
Cla97C01G016590Cucumber (Gy14) v1cgywmbB127
Cla97C01G016590Cucumber (Gy14) v1cgywmbB672
Cla97C01G016590Cucurbita maxima (Rimu)cmawmbB160
Cla97C01G016590Cucurbita maxima (Rimu)cmawmbB562
Cla97C01G016590Cucurbita maxima (Rimu)cmawmbB670
Cla97C01G016590Cucurbita maxima (Rimu)cmawmbB875
Cla97C01G016590Cucurbita moschata (Rifu)cmowmbB144
Cla97C01G016590Cucurbita moschata (Rifu)cmowmbB642
Cla97C01G016590Cucurbita moschata (Rifu)cmowmbB849
Cla97C01G016590Wild cucumber (PI 183967)cpiwmbB100
Cla97C01G016590Wild cucumber (PI 183967)cpiwmbB433
Cla97C01G016590Cucumber (Chinese Long) v3cucwmbB102
Cla97C01G016590Cucumber (Chinese Long) v3cucwmbB430
Cla97C01G016590Cucumber (Chinese Long) v2cuwmbB098
Cla97C01G016590Cucumber (Chinese Long) v2cuwmbB412
Cla97C01G016590Bottle gourd (USVL1VR-Ls)lsiwmbB115
Cla97C01G016590Bottle gourd (USVL1VR-Ls)lsiwmbB422
Cla97C01G016590Melon (DHL92) v3.6.1medwmbB259
Cla97C01G016590Melon (DHL92) v3.6.1medwmbB505
Cla97C01G016590Melon (DHL92) v3.5.1mewmbB274
Cla97C01G016590Melon (DHL92) v3.5.1mewmbB513
Cla97C01G016590Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G016590Watermelon (Charleston Gray)wcgwmbB314
Cla97C01G016590Watermelon (97103) v1wmwmbB078
Cla97C01G016590Watermelon (97103) v1wmwmbB234