Cla97C01G015910 (gene) Watermelon (97103) v2

Overview
NameCla97C01G015910
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionconserved peptide upstream open reading frame 49
LocationCla97Chr01 : 29669657 .. 29674327 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGCTCGGCTCGGCTCGGCTCGGCTTGTTTCCTTGGATATTTCGTATGGAGAGGGGTTCGTCAAATCAAAACAATGTGCTTTCCAAAATCCCACATTCACACCATGTTTGTCTGGTATTTTATTACCGCCTCACAAAGTTTGGTGCCCTCTCCTAACATTTTACTTACTACAATTATACTTTAAATACTTTATACAAACCCATATTACCAATTCCCTTCCATTTTTCCGCCCCCTTAATATATTCATATTTAAAATTTTGTTTCCAATTATTAACTTATTCTTTGTAATCACACCCTTTTTGTTCCCTTGTGTTTCAACATATGATTAATGATTCTCCATCTACGGTAGAATTTTAATTATTTCAAACACATCTATAGACACCAATTTTGTGATGATTACAATATAGAGAATCAAAATATACATGAATATTATCCAAGTTTGACCATAATTCTACTTTAGCTAAAATGGTCAAAGATTTCAAATCTTTTTACATTATATTGTTCAATTATAAATAAAATTTAAAAAATAGTTATGGTATATGTTGATATTATAACAATTTCATGTGTCAAAGCGAGCATAATTTAACTAATATGTAGTATGTGTTAATAATAAAAGATCTATGGTATGAAGTCTCCTACTCCTATTTTACTAGAAAAAAAAAAAAAATATATATATATATATATAAAAACTCTATACTAAAAGGTATTTGATTTAAGATATTGACTTTTGGGGCAAATTTCTTAAAAGATAGAACATATAAATATTTTTTAAGAATAGATTATATACATTTTATATGCCAAATGTATTGTTGTTGTTATTATTATCCTAGTTTAAACAATTAACTTTTTTATTAAAAAAAACTATTTTATCATTATTATTGTTAGTTTTTTTTTTAAATTTTTTAGTCGAATAGATATGTCTTAACTAATTAAGTTATACATACTCCAAATTGGAAACAATTCTTTTATTATTAACTTGATAAAGATATTTATTTAATACATATAATAAATAATTTATTTTACCATATAGAGTGGAAGAACACAAGTGCAAGTCTACGATGCCAAATTACATGTCTCATAATCAACAACATTATTACAACAAGCTACCATCTATATTTCTTGACATTTTTATCCTTTCAAATAACTTTAATACCTTTAGTTATGTGACGGCTCAAGATTAGATTCCAACCAAGATTTAGATTTAGATTTGTCACTCATACTTCAAACATTATCTTTATCTTTAATAACCCAAGTCTTGTGAATACATGTCACCCAATCAAGCATGCTAGCCATTACTGAAAAAAGAAGTATATGAATTCAACTATAAATATTAGCTATCAATTATTTTTGTTTTGTCTCAATAACGTACGTGTCGATTTAGAGTTGTTCTTAGACTACTATTTATGTCTATCTGTGTCATGATAGACACAGATAGTAGTCTATCGCGATTTATCACAGACAGATTGTGATATTTTATTATTATTTATAAATATTTTTAGCAATTTTGTCATTTAAAATAATTTTTTATGAATATATTCGTCGATCTATAAAAATTAAATTATTTTGTCCTTGGGTGGGGTGTTAGAAATTAGAAAATATAGATTGGGTTGAGTAAGTTTATTAGTAGGTTGATTACATATATTACATAAGATTGAAGAATATTTGAGGTACAAAAATGGTATAGAAAGTTATAAAAAGAAAAAAAAGAAAAAGTAAAAAAATAAATAAAAGAAGAGGTGTGCATGTAACTGACCAAATTAATTAGTATGATGTATTTATGTATTTGTATTTTGGTGAGAGTGTAAGGTAAGCAAATAATAATAATGTGTTTAGACGGTTAGGGAAGGCCCTGTTGGACAAGTGTGAAGCCGAAAATTGGCCAAACAGGATCATTTATCCAATCTGCTTGGGAAGCACCTACTTTTGGAAAAAACTTCATGCTCTCCACCTTCGGCATGTATGTAAATTGTTTGGACAACACTAATCAAACGTCTACTTACTACGCCCTCTATTTTTTAAAATATCTTTTTGGGTCCCTACATAATAACTATCTATGTTATGTCTATTGGGTAGTACCAAAAACAACCCCATGAGAGTAATATTCAAATTTCAGAATGGATAATTATCATAATATTGTCACTTTAAACATCCATTTTTCTTTGAATACCTAATTTTAATTTTGAAGTTAATGTCTATTATTTAATTGAATTAATTATGAAGTGGTAATTTAAAATTAATAGTAACTGTGATGAAAAATTAGTAAAACTCAATTAAATATTATTTTTTCTTTTTAAATTAATTAAAATACGTTAGCACTAAAGACTAAAAGCGAATATTTAGTAAAAAAATCAAGGTTAAAAATATAAAATTTGAAAACTAGAGACTATAATGAAACAAAATTTAAATCTCATTAATGAAATTGTAATATTTTAAAACCTACAGATTAAATTTAAATCAAACTCAAAACTTAAGAATTAAAAGTGTAATATTTTGAAACATAAGAATTAAATAGAAACTAGACCAAAAACATAGTGTTGAAGGAGAGAAATTTTAGACCAATTAAAAGTTGTCACATCACTTTTCAAATTAATGGCAAAACTACAATTAATTGAATTTGGAACTAATTAAAAGTTAACATGTGTTCTAAATTTTAAATTGAATACATAAATTGACAAATCAAATGATGCTACATGTTTTTGTTAGATCAAATAAAACAATTTAATTCAATTTGATATTAATATTTGGTCTAAAGTTCAATTGAGCCCAAAAATAGACATATAATTTGGCTCAAAGAAGCTCAAGCTCGTAAAAGTCCATCTGATTAACTCTGAGAGATCCTCATCTTCATTTGAAGGTTCAAAAATTTTAAACTCTAGAGAGCCTACCCCAACACTCAAAGGACTCTCTGACTCCTGAAGTCAAACCATGCTTGAAAATTGAAGTTATTTTGAAATCAAACATTCTCTCAAGACTCCAATTTCAAGAACATCTATGTGCTTTACTTCCATACATCAAGTGTATGCATTCAACTGAGAGAGAAGTAGAAGATCAAATACAAAAGATCTAACCATATCTGCTTTTACTCAACATAAACACAAGTTTAACTTTACGAAACACGTTTCCTACAAAATCTTGTGCTAACACTTAAAAGGAACACAAAAAATGTAATTTCTCTCTCTCTTGTTTCCTTCCTTGATTTTTTAACACCTTTCTCAAGATTGTGATTATCTTAAAACGTTAGTTTACTGTAAAGTTTGGATTTAGTTAAATATCTTCCTCATTTTATAGTTAAATATAGCAAAATTTTAATTTTCTATTAGTGATAGGCAAATAAACATTTATTACTTTAGTGATAGATACCGATAAATGTCTATTTGGATCTATTACAGTGTAACACGGATAGAAAAGTAAATTTTGTTATATTTATAAATATTTTCAACAATTTTATCATTTAAAAAAAAAATTTCTACCATAAAAATTTAAAATTCACGAATTTTTGGTGTAGATGGTTGATGATGATTCATAAGACTATAAATAAATTAGAATTATGGAAATTGAGAAGATTTTGTTTAGGATAGTTGTAGTTAATTTAAAATTTACTTTTATGTTAGATTTACACTTATGGCCGGTAAAACTCATGTGAAGAAAGCCGAGATGGAGTTAGGTGTAAGAGAAAGAGAGAGGAAAAATAAAATTAAAAAAAAATAAAAATAATAAAAAAATAATAATAAAAAAAAAAAGATGAAACGTTCCTGTCTTTTCCAGGGAAAGGCGTTGGCTTGGCGGTCATACTCTTTTATTTTTATTCAAAAAGAAAAACGCGTTCACATTTGAAAATTTCAAAAAAATGAAAAAACTTGGCACTACAATTACAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAAAGAAAAAGAGAACACGGCTCCCCCTGAAAGGGTTATTAGAAGCTTCGCGGTATATAACCCAGATCCAGTTTGCAAGCTTTGGGTTGTTTCCAGAGCTTTGATTATTAAAATAATAATTAAACAATCCTCCATTGTCAAAAAGCGGCTCTTTCGATCTCAATCTATATCTTTCATGTCTATCCCCCTCCCGCCTTTTGTATATTTTCAACAATGCTTTTATAATTGAAATACACAGGGTATTGTATTGTATTGTATTGATATTAGTGGATGAGCAGCGGAACCGGACGGGTTCTTTCTGTTGTTGTGGCTTCATTGGCCACTACAAAACAAAACTTTCTTTTTTCTTTTTTCTTTTTTAAATTCATTAATAATATTCTAGGATGCTGTTTCTGAAGACTTCTAGAAGCAACTCCACGTCACTGCCTTTTTTTTTTTTTCTTTTTTCTTTTCCTTCTCCACTTCTTCTTTAAAAGGACTCTCCTTACATGAACTTGGAAAAAGAAGAATTATTATTATTATTATTAATTAGCACAATAATCTTGGGGGTTCCTATATTCTTCTTCTTCCCATTTTGTAGTTATGGTCCTTTCCTTCTCTTCATTCCAACATGGGACTTGTTGACAAGCCCCCTCTTCGCTCCATCTCCGGTTTCTACTGCTGGGATTGGGAATTCCTCACCGCTCTTCTTCTCTTCAGCCCACTCATCATCTCATCCTATTTCTTCTTCATTAATCATTACTTGTAA

mRNA sequence

ATGTTTGGCTCGGCTCGGCTCGGCTCGGCTTGTTTCCTTGGATATTTCGTATGGAGAGGGTTATGGTCCTTTCCTTCTCTTCATTCCAACATGGGACTTGTTGACAAGCCCCCTCTTCGCTCCATCTCCGGTTTCTACTGCTGGGATTGGGAATTCCTCACCGCTCTTCTTCTCTTCAGCCCACTCATCATCTCATCCTATTTCTTCTTCATTAATCATTACTTGTAA

Coding sequence (CDS)

ATGTTTGGCTCGGCTCGGCTCGGCTCGGCTTGTTTCCTTGGATATTTCGTATGGAGAGGGTTATGGTCCTTTCCTTCTCTTCATTCCAACATGGGACTTGTTGACAAGCCCCCTCTTCGCTCCATCTCCGGTTTCTACTGCTGGGATTGGGAATTCCTCACCGCTCTTCTTCTCTTCAGCCCACTCATCATCTCATCCTATTTCTTCTTCATTAATCATTACTTGTAA

Protein sequence

MFGSARLGSACFLGYFVWRGLWSFPSLHSNMGLVDKPPLRSISGFYCWDWEFLTALLLFSPLIISSYFFFINHYL
Homology
[Close]
BLAST of Cla97C01G015910 vs. NCBI nr
Match: XP_016899204.1 (PREDICTED: uncharacterized protein LOC107990445 [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 8.4e-06
Identity = 29/37 (78.38%), Postives = 29/37 (78.38%), Query Frame = 0 

Query: 31 MGLVDKPP----LRSISGFYCWDWEFLTALLLFSPLI 64
          MGL  KP     LRS SGFYCWDWEFLTALLLFSPLI
Sbjct: 1  MGLDHKPHLANLLRSFSGFYCWDWEFLTALLLFSPLI 37

[Close]
BLAST of Cla97C01G015910 vs. TrEMBL
Match: tr|A0A1S4DT90|A0A1S4DT90_CUCME (uncharacterized protein LOC107990445 OS=Cucumis melo OX=3656 GN=LOC107990445 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.6e-06
Identity = 29/37 (78.38%), Postives = 29/37 (78.38%), Query Frame = 0 

Query: 31 MGLVDKPP----LRSISGFYCWDWEFLTALLLFSPLI 64
          MGL  KP     LRS SGFYCWDWEFLTALLLFSPLI
Sbjct: 1  MGLDHKPHLANLLRSFSGFYCWDWEFLTALLLFSPLI 37

[Close]
BLAST of Cla97C01G015910 vs. TAIR10
Match: AT4G36988.1 (conserved peptide upstream open reading frame 49)

HSP 1 Score: 45.4 bits (106), Expect = 1.7e-05
Identity = 18/19 (94.74%), Postives = 19/19 (100.00%), Query Frame = 0 

Query: 42 ISGFYCWDWEFLTALLLFS 61
          +SGFYCWDWEFLTALLLFS
Sbjct: 17 LSGFYCWDWEFLTALLLFS 35

The following BLAST results are available for this feature:
BLAST of Cla97C01G015910 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016899204.18.4e-0678.38PREDICTED: uncharacterized protein LOC107990445 [Cucumis melo][more]
BLAST of Cla97C01G015910 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DT90|A0A1S4DT90_CUCME5.6e-0678.38uncharacterized protein LOC107990445 OS=Cucumis melo OX=3656 GN=LOC107990445 PE=... [more]
BLAST of Cla97C01G015910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C01G015910 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36988.11.7e-0594.74conserved peptide upstream open reading frame 49[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G015910.1Cla97C01G015910.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G015910Wax gourdwgowmbB344
Cla97C01G015910Wax gourdwgowmbB403
Cla97C01G015910Cucumber (Chinese Long) v3cucwmbB105
Cla97C01G015910Watermelon (97103) v2wmbwmbB007
Cla97C01G015910Watermelon (97103) v2wmbwmbB011
Cla97C01G015910Watermelon (97103) v2wmbwmbB021
Cla97C01G015910Silver-seed gourdcarwmbB0185
Cla97C01G015910Silver-seed gourdcarwmbB0211
Cla97C01G015910Silver-seed gourdcarwmbB0426
Cla97C01G015910Silver-seed gourdcarwmbB0803
Cla97C01G015910Silver-seed gourdcarwmbB0839
Cla97C01G015910Cucumber (Gy14) v2cgybwmbB096
Cla97C01G015910Cucumber (Gy14) v2cgybwmbB252
Cla97C01G015910Cucumber (Gy14) v2cgybwmbB394
Cla97C01G015910Cucumber (Gy14) v2cgybwmbB489
Cla97C01G015910Cucumber (Gy14) v1cgywmbB127
Cla97C01G015910Cucumber (Gy14) v1cgywmbB392
Cla97C01G015910Cucumber (Gy14) v1cgywmbB634
Cla97C01G015910Cucurbita maxima (Rimu)cmawmbB013
Cla97C01G015910Cucurbita maxima (Rimu)cmawmbB091
Cla97C01G015910Cucurbita maxima (Rimu)cmawmbB521
Cla97C01G015910Cucurbita maxima (Rimu)cmawmbB670
Cla97C01G015910Cucurbita maxima (Rimu)cmawmbB800
Cla97C01G015910Cucurbita maxima (Rimu)cmawmbB875
Cla97C01G015910Cucurbita moschata (Rifu)cmowmbB078
Cla97C01G015910Cucurbita moschata (Rifu)cmowmbB502
Cla97C01G015910Cucurbita moschata (Rifu)cmowmbB642
Cla97C01G015910Cucurbita moschata (Rifu)cmowmbB849
Cla97C01G015910Wild cucumber (PI 183967)cpiwmbB271
Cla97C01G015910Wild cucumber (PI 183967)cpiwmbB433
Cla97C01G015910Wild cucumber (PI 183967)cpiwmbB540
Cla97C01G015910Cucumber (Chinese Long) v3cucwmbB430
Cla97C01G015910Cucumber (Chinese Long) v3cucwmbB535
Cla97C01G015910Cucumber (Chinese Long) v2cuwmbB412
Cla97C01G015910Bottle gourd (USVL1VR-Ls)lsiwmbB038
Cla97C01G015910Bottle gourd (USVL1VR-Ls)lsiwmbB115
Cla97C01G015910Bottle gourd (USVL1VR-Ls)lsiwmbB257
Cla97C01G015910Bottle gourd (USVL1VR-Ls)lsiwmbB317
Cla97C01G015910Melon (DHL92) v3.6.1medwmbB072
Cla97C01G015910Melon (DHL92) v3.6.1medwmbB450
Cla97C01G015910Melon (DHL92) v3.6.1medwmbB505
Cla97C01G015910Melon (DHL92) v3.5.1mewmbB078
Cla97C01G015910Melon (DHL92) v3.5.1mewmbB456
Cla97C01G015910Melon (DHL92) v3.5.1mewmbB513
Cla97C01G015910Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G015910Watermelon (Charleston Gray)wcgwmbB129
Cla97C01G015910Watermelon (Charleston Gray)wcgwmbB132
Cla97C01G015910Watermelon (97103) v1wmwmbB234
Cla97C01G015910Watermelon (97103) v1wmwmbB249
Cla97C01G015910Watermelon (97103) v1wmwmbB306
Cla97C01G015910Watermelon (97103) v1wmwmbB308