Cla97C01G010820 (gene) Watermelon (97103) v2

Overview
NameCla97C01G010820
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionglutamate--tRNA ligase, cytoplasmic
LocationCla97Chr01 : 16857713 .. 16860678 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTAAGCTTTTGTCATTTCCGGCCGATACCCCTCCATTCTTCGTCATTGTGGCTGCCAAGCTTTCCGGTATAACTTTTTCTGAGGATTCCTCTCTTGCTTCTGGCTCCGCTCCCACATTTCTCTTTACTAACGGGTATAATCAGATCCCTCTCTCTGCTTATTTTTATCTTCTTTAACTTCTATTAGAGCAAAATGTTTCAGATTCGACCTTCAAAAGATATTCATTTTGATTTATAACAATTGTTTTTCTATAATTCCAAATTTGTTTCTCTCTCTCTGTTTTTTATTTCTTTGCGCCTATTTCTTGAGTTGAAGGTGTGAAGTCATTGTGGTCTGTTTTATGAACATTCAACTCTAGTAGGTTAAGAACAGAATTTTTATTTTATCCAAGATTTATTTGGTACTTTGCATCATGATCTAACCAGATTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGTTTCAGAGACCCGAAGCAATTAAAAATGTATTTCTGCATAAATCTTAATACATGCTAATTTTCTACACGGGTGAACATTTTTTTTTTAATTGATGAACTTATAATAGTTATTTGAACTTGATTGAACTGAACCATAAAATCATTGATGTATATACAGAATTTGTATACATGGGCCTATTGAGCAAATTTATAATATCGACTAGGGGATTAACTTAACTTCTGCGGTTTAGTTATATTTTACCAGAATCAGCATACAAGTTGAAGATAAAATTAAGATATTGTTAAGGACAATGGAACCCTCTCAATTGTCTACTTGTCGTGACTTTGCTTTTGATTTCAACCAAAAGGTTTTATATCGATAAAAATATAGTCTCTCATCCATTTACTCTTGATATTCCCTTCTCCAGCTAACGTGGGACTTTGGTTGCATTCTCAACAAAAATGTTGATTCTAACCTTGTCTTCCCTTAATTACTTTCTCTGCCTTTAACTTGAAAACCATGCTCATTATAAATGTTCTTGTTTTATATGCTCTCTGTTTAATCCATTGGCCTAGAGGGAGCCTCTATCTGTCTTGCTTATTATCTTCTCATCTTTCAGATTTGCCAGCTTCTTGTACATGGAATTTATCCTCCAAACTTTTATAGTCTTCTTAAATGCAATTTATAATTGAACCACAAATGTACCACAATTTTCGGACAATCACTTTATTGCATGAATACACTGTTTATGCCTTGACATCCATTGGTGCTTTATTGGTTGTCTTATAAAAAACATGGGGGAATGCATCATTTGTTGTCATTGTCTGCTTACTTTTATTTTATTTTTTTAATAGTTTATGAGTTGGAATTTGACTTTTGCCGAGGCAACATTAGTGATTATTTTAAAGCTTGCTTGGACAACCTTTGATCCAATTGTAAATCATTTCCACTAAACTTTTATCTTTGGAGGCTTGCATTACACTCCTGCTATTTAAACTTCAAAAGGAAATTTACTCTCCATTTGATATGAATCAGAGGAAAGAATGTGTAATAAACTGTTACTCAATGCTTAAGTCTCGTTAATCTGTTGTAGGTCGAAGTTGTATGGAACATCTGTGCTTCTACGTTATATTGGTCGAGTCACTAACATTCCTAATTTCTATGGACCGAACGCATACGAGTCCAGTCAGGTAAGATGAAAAATATATTTATTAACACGATCTAAATGTTCATTCTGATGTATGGCTTGATGTTTATTAATTTTTGCGATTGTTCATAAGGCTAATTTCTTAATAATAAACTTCTCTCATATCTACGCATGGATTTTAACCCAGATTGATGAATGGCTAGAGTATGCTCCTATCCTTTCGTCCGGTTGGTTCTGCATTTGAGAGCGCATGCAGTTATGTTGATAAGTACTTGGAAAGACAGACATTTCTTGTTAGCAATTATTTTTCACTTGCAGATGTAGCTATCTGGTCCGGCTTAGCAGGTATATATGTATATATATCTATATTAAAAATAAAGAACAGTAATTACCAGTGTTTTAAAAAGCCGTTGTGCGTCTAGGCTCAAGGTGCAGGTTTGACACCTTGCCTTGAAAATGCGAGGCTTAGAAAATATGACGCACCTCAAGCGCACGCCTTTTGTGAAGTAGAGCCTTGGGTTTTCTTTCACTACCTTTTAAAAACATAGTAATAATTAGGGTTTTTCCTTCTTTATCAATTAAAAATGTCAAATTTACTGAGCCTAAATGCAAAATTTCTTTTGTGAGTGTCTGTTTTTAATATAATTTTTAATTTTATATATTTCCACTTCAAATATTCTTTCTCTACTTTAAGTAATACTTTTATATGTATTGCGCCTCACAAACAAAACCCACTTTTTTCTCCAAGCACTTGAACTCCATAAGACTATTCCACTTTGAGCTTTAAATAACATAGGTAGCTACCATTTATCCATTGTTTCTCAAATCTTTTCCTACATCACCAAGCCTATCTCGAGAGAGGGAGAGAAAGACAAGATGCCATGTCGTGTTTGTTTTTATTAAATTAATCATAGTGTTCCTTGTTTTTAACCCACATGCCTACTTATACACAGACACAGTCACAATCACACACAAACGCTCCATATATAGAGTGACAGATAGTTGGCTTATTAAAACTATGTGCATTGTGTTTTTTACAGGAACTGGGCAACGGTGGGAAAGCTTGAGAAAGTCAAAGAAGCACATAAATCTTCAACGATGGTTTAATTCACTCTTAGTTGAATATCGTGATAACTTGGATGATGTCTTAACTACATATGCTGGCAAAAGAGGTGGAAAGGCTTCAGGAGCTAAAAGCCAAATAGTGTCAACCACGAGACATCTGATAAGGGGAAAGCTGGAAGCAAATGTACCTTTGAAGTTGATCTTCCAAATGTGGAGATCGGGAAGGTGCGTTTGCGTTTTGCACCTGAGCCTAGTGGATATCTTCACATTGGGCACTCAAAAGCAGCATTGTTGA

mRNA sequence

ATGGATATTAAGCTTTTGTCATTTCCGGCCGATACCCCTCCATTCTTCGTCATTGTGGCTGCCAAGCTTTCCGGTATAACTTTTTCTGAGGATTCCTCTCTTGCTTCTGGCTCCGCTCCCACATTTCTCTTTACTAACGGGTCGAAGTTGTATGGAACATCTGTGCTTCTACGTTATATTGGTCGAGTCACTAACATTCCTAATTTCTATGGACCGAACGCATACGAGTCCAGTCAGGCTAATTTCTTAATAATAAACTTCTCTCATATCTACGCATGGATTTTAACCCAGATTGATGAATGGCTAGAGTATGCTCCTATCCTTTCGTCCGATGTAGCTATCTGGTCCGGCTTAGCAGGAACTGGGCAACGGTGGGAAAGCTTGAGAAAGTCAAAGAAGCACATAAATCTTCAACGATGGTTTAATTCACTCTTAGTTGAATATCGTGATAACTTGGATGATGTCTTAACTACATATGCTGGCAAAAGAGGTGGAAAGGCTTCAGGAGCTAAAAGCCAAATAGTGTCAACCACGAGACATCTGATAAGGGGAAAGCTGGAAGCAAATGTACCTTTGAAGTTGATCTTCCAAATGTGGAGATCGGGAAGGTGCGTTTGCGTTTTGCACCTGAGCCTAGTGGATATCTTCACATTGGGCACTCAAAAGCAGCATTGTTGA

Coding sequence (CDS)

ATGGATATTAAGCTTTTGTCATTTCCGGCCGATACCCCTCCATTCTTCGTCATTGTGGCTGCCAAGCTTTCCGGTATAACTTTTTCTGAGGATTCCTCTCTTGCTTCTGGCTCCGCTCCCACATTTCTCTTTACTAACGGGTCGAAGTTGTATGGAACATCTGTGCTTCTACGTTATATTGGTCGAGTCACTAACATTCCTAATTTCTATGGACCGAACGCATACGAGTCCAGTCAGGCTAATTTCTTAATAATAAACTTCTCTCATATCTACGCATGGATTTTAACCCAGATTGATGAATGGCTAGAGTATGCTCCTATCCTTTCGTCCGATGTAGCTATCTGGTCCGGCTTAGCAGGAACTGGGCAACGGTGGGAAAGCTTGAGAAAGTCAAAGAAGCACATAAATCTTCAACGATGGTTTAATTCACTCTTAGTTGAATATCGTGATAACTTGGATGATGTCTTAACTACATATGCTGGCAAAAGAGGTGGAAAGGCTTCAGGAGCTAAAAGCCAAATAGTGTCAACCACGAGACATCTGATAAGGGGAAAGCTGGAAGCAAATGTACCTTTGAAGTTGATCTTCCAAATGTGGAGATCGGGAAGGTGCGTTTGCGTTTTGCACCTGAGCCTAGTGGATATCTTCACATTGGGCACTCAAAAGCAGCATTGTTGA

Protein sequence

MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYIGRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILSSDVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDNLDDVLTTYAGKRGGKASGAKSQIVSTTRHLIRGKLEANVPLKLIFQMWRSGRCVCVLHLSLVDIFTLGTQKQHC
Homology
[Close]
BLAST of Cla97C01G010820 vs. NCBI nr
Match: XP_022961381.1 (glutamate--tRNA ligase, cytoplasmic-like [Cucurbita moschata] >XP_022961382.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita moschata] >XP_022961383.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 249.6 bits (636), Expect = 1.0e-62
Identity = 136/200 (68.00%), Postives = 142/200 (71.00%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MDIKLLSFPAD+PP  VIVAAK SGITF  DSSLASGSAPTFLFTNG KL+GTSVLLRYI
Sbjct: 1   MDIKLLSFPADSPPLSVIVAAKFSGITFPADSSLASGSAPTFLFTNGLKLHGTSVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILS----------- 120
           GRVTNIPNFYG NAYESS                  QIDEWLEYAPILS           
Sbjct: 61  GRVTNIPNFYGENAYESS------------------QIDEWLEYAPILSTGSAFENACSY 120

Query: 121 ------------------SDVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 172
                             +DVAIWSGLAGTG RWESLRKSKK++NLQRWFNSLLVEY D 
Sbjct: 121 VDKYLERRTFLVSHSLSLADVAIWSGLAGTGPRWESLRKSKKYLNLQRWFNSLLVEYSDG 180

[Close]
BLAST of Cla97C01G010820 vs. NCBI nr
Match: XP_023521072.1 (glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo] >XP_023521073.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo] >XP_023521074.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.4 bits (633), Expect = 2.2e-62
Identity = 135/200 (67.50%), Postives = 142/200 (71.00%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MDIKLLSFPAD+PP  VIVAAK + ITF  DSSLASGSAPTFLFTNGSKL+GTSVLLRYI
Sbjct: 1   MDIKLLSFPADSPPLSVIVAAKFASITFPADSSLASGSAPTFLFTNGSKLHGTSVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILS----------- 120
           GRVTNIPNFYG NAYESS                  QIDEWLEYAPILS           
Sbjct: 61  GRVTNIPNFYGENAYESS------------------QIDEWLEYAPILSTGSAFENACSY 120

Query: 121 ------------------SDVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 172
                             +DVAIWSGLAGTG RWESLRKSKK++NLQRWFNSLLVEY D 
Sbjct: 121 VDKYLERRTFLVSHSLSLADVAIWSGLAGTGPRWESLRKSKKYLNLQRWFNSLLVEYSDE 180

[Close]
BLAST of Cla97C01G010820 vs. NCBI nr
Match: XP_022968862.1 (glutamate--tRNA ligase, cytoplasmic-like [Cucurbita maxima] >XP_022968864.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita maxima] >XP_022968865.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita maxima])

HSP 1 Score: 246.5 bits (628), Expect = 8.5e-62
Identity = 134/200 (67.00%), Postives = 142/200 (71.00%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MDIKLLSFPAD+PP  VIVAAK + I F  DSSLASGSAPTFLFTNGSKL+GTSVLLRYI
Sbjct: 1   MDIKLLSFPADSPPLSVIVAAKFASIPFPADSSLASGSAPTFLFTNGSKLHGTSVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILS----------- 120
           GRVTNIPNFYG NAYESS                  QIDEWLEYAPILS           
Sbjct: 61  GRVTNIPNFYGENAYESS------------------QIDEWLEYAPILSTGSAFENACSY 120

Query: 121 ------------------SDVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 172
                             +DVAIWSGLAGTG RWESLRKSKK++NLQRWFNSLLVEY D+
Sbjct: 121 VDKYLKRRTFLVSHSLSLADVAIWSGLAGTGPRWESLRKSKKYLNLQRWFNSLLVEYSDD 180

[Close]
BLAST of Cla97C01G010820 vs. NCBI nr
Match: XP_004135579.1 (PREDICTED: glutamate--tRNA ligase, cytoplasmic [Cucumis sativus] >KGN66007.1 hypothetical protein Csa_1G561380 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 4.4e-58
Identity = 128/200 (64.00%), Postives = 136/200 (68.00%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MDIKLLSFPAD  PF VIVAAKL+GITF  DSSL S S PTF FT+G KL+G SVLLRYI
Sbjct: 1   MDIKLLSFPADNTPFSVIVAAKLAGITFPSDSSLPSASPPTFFFTDGLKLHGASVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILSS---------- 120
           GRVTNIPNFYG NA+ESS                  QIDEWLEYAPILSS          
Sbjct: 61  GRVTNIPNFYGQNAFESS------------------QIDEWLEYAPILSSGSAFENACSY 120

Query: 121 -------------------DVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 172
                              DVAIWSGLAGTGQRWESLRKSKK++NLQRWFNSLLVEY D 
Sbjct: 121 VDKYLERRTFLVGHSLSLADVAIWSGLAGTGQRWESLRKSKKYLNLQRWFNSLLVEYSDE 180

[Close]
BLAST of Cla97C01G010820 vs. NCBI nr
Match: XP_008450490.1 (PREDICTED: glutamate--tRNA ligase, cytoplasmic [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 4.4e-58
Identity = 127/200 (63.50%), Postives = 136/200 (68.00%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MDIKL SFPAD  PF VIVAAKL+GI F  DSSL S S PTFLFT+GSKL+G SVLLRYI
Sbjct: 1   MDIKLFSFPADNTPFSVIVAAKLAGIAFPSDSSLPSASPPTFLFTDGSKLHGASVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILSS---------- 120
           GRVTNIPNFYG NAYESS                  +IDEWLEYAPILSS          
Sbjct: 61  GRVTNIPNFYGQNAYESS------------------RIDEWLEYAPILSSGSAFENACSY 120

Query: 121 -------------------DVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 172
                              DVA+WSGLAGTGQRWESLRKSKK++NLQRWFNSLLVEY D 
Sbjct: 121 VDKYLERCTFLVGHSLSLADVAVWSGLAGTGQRWESLRKSKKYLNLQRWFNSLLVEYSDE 180

[Close]
BLAST of Cla97C01G010820 vs. TrEMBL
Match: tr|A0A1S3BPD2|A0A1S3BPD2_CUCME (glutamate--tRNA ligase, cytoplasmic OS=Cucumis melo OX=3656 GN=LOC103492081 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.9e-58
Identity = 127/200 (63.50%), Postives = 136/200 (68.00%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MDIKL SFPAD  PF VIVAAKL+GI F  DSSL S S PTFLFT+GSKL+G SVLLRYI
Sbjct: 1   MDIKLFSFPADNTPFSVIVAAKLAGIAFPSDSSLPSASPPTFLFTDGSKLHGASVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILSS---------- 120
           GRVTNIPNFYG NAYESS                  +IDEWLEYAPILSS          
Sbjct: 61  GRVTNIPNFYGQNAYESS------------------RIDEWLEYAPILSSGSAFENACSY 120

Query: 121 -------------------DVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 172
                              DVA+WSGLAGTGQRWESLRKSKK++NLQRWFNSLLVEY D 
Sbjct: 121 VDKYLERCTFLVGHSLSLADVAVWSGLAGTGQRWESLRKSKKYLNLQRWFNSLLVEYSDE 180

[Close]
BLAST of Cla97C01G010820 vs. TrEMBL
Match: tr|A0A0A0LYW4|A0A0A0LYW4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561380 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.9e-58
Identity = 128/200 (64.00%), Postives = 136/200 (68.00%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MDIKLLSFPAD  PF VIVAAKL+GITF  DSSL S S PTF FT+G KL+G SVLLRYI
Sbjct: 1   MDIKLLSFPADNTPFSVIVAAKLAGITFPSDSSLPSASPPTFFFTDGLKLHGASVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILSS---------- 120
           GRVTNIPNFYG NA+ESS                  QIDEWLEYAPILSS          
Sbjct: 61  GRVTNIPNFYGQNAFESS------------------QIDEWLEYAPILSSGSAFENACSY 120

Query: 121 -------------------DVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 172
                              DVAIWSGLAGTGQRWESLRKSKK++NLQRWFNSLLVEY D 
Sbjct: 121 VDKYLERRTFLVGHSLSLADVAIWSGLAGTGQRWESLRKSKKYLNLQRWFNSLLVEYSDE 180

[Close]
BLAST of Cla97C01G010820 vs. TrEMBL
Match: tr|A0A2I4DHL4|A0A2I4DHL4_9ROSI (glutamate--tRNA ligase, cytoplasmic OS=Juglans regia OX=51240 GN=LOC108980232 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.1e-44
Identity = 104/220 (47.27%), Postives = 130/220 (59.09%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           M+IK+LSFPAD+PP  VIVAAK+SG     D+SL   SAPT LF++G+ L+GT VLLRYI
Sbjct: 1   MEIKVLSFPADSPPLSVIVAAKISGFALPTDTSLPPDSAPTLLFSDGTTLHGTYVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILS----------- 120
           GRV+ +PNFYG NAYES                   QID+WLEYAP+ S           
Sbjct: 61  GRVSALPNFYGQNAYESG------------------QIDQWLEYAPVFSLGSAFENACKY 120

Query: 121 ------------------SDVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 180
                             +D+AIWSGLAGTGQRWESLRKSKK+ NL RWFNS+ +EY D 
Sbjct: 121 VDEFLQSHTVLVGNYLSIADIAIWSGLAGTGQRWESLRKSKKYQNLVRWFNSIFLEYSDA 180

Query: 181 LDDVLTTYAGKRGGKASGAKSQIVSTTRHLIRGKLEANVP 192
           L++V   Y GK+  K   AKS+      +  +   E ++P
Sbjct: 181 LNEVTAMYIGKK--KLVAAKSKEQQGENNQSKNSFEVDLP 200

[Close]
BLAST of Cla97C01G010820 vs. TrEMBL
Match: tr|A0A218WIN0|A0A218WIN0_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018243 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-43
Identity = 107/212 (50.47%), Postives = 127/212 (59.91%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           M+IK LSF AD+PP  VIVAA+L+GI  + DSSLASGS P F+ +NG KL+GT VLLR+I
Sbjct: 1   MEIKQLSFAADSPPLSVIVAAELAGIPLATDSSLASGSTPFFVLSNGLKLHGTYVLLRFI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILSS---------- 120
           GR+  +PNFYG  AYESS                  QIDEWLEYAP+LSS          
Sbjct: 61  GRIAKLPNFYGATAYESS------------------QIDEWLEYAPVLSSGSEFENVCKY 120

Query: 121 -------------------DVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 180
                              DVAIWSGLAG G RWESLRKSKK+ NL RWFNSL  EY   
Sbjct: 121 IDEYLEKRTFILGHSLSIADVAIWSGLAGVGVRWESLRKSKKYQNLVRWFNSLSSEYDSV 180

Query: 181 LDDVLTTYAGKRG--GKASGAKSQIVSTTRHL 182
           L +VL  Y  KRG  GK + +K   VS ++++
Sbjct: 181 LSEVLAKYVSKRGGTGKQTASKQGAVSQSKNV 194

[Close]
BLAST of Cla97C01G010820 vs. TrEMBL
Match: tr|W9SWJ4|W9SWJ4_9ROSA (Putative glutamate--tRNA ligase OS=Morus notabilis OX=981085 GN=L484_021319 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43
Identity = 108/226 (47.79%), Postives = 130/226 (57.52%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           M+IK L+FP D+PP  VI AAK+  I F+ D S A   AP+FLF+NG KL+GT VLLRYI
Sbjct: 1   MEIKSLTFPVDSPPLMVIAAAKIGAIPFTADPSTAPVPAPSFLFSNGLKLHGTYVLLRYI 60

Query: 61  GRVTNIPNFYGPNAYESSQANFLIINFSHIYAWILTQIDEWLEYAPILS----------- 120
           GR+ +IP+FYG NAY+++                  QIDEWLEYAPI S           
Sbjct: 61  GRIASIPDFYGKNAYDAA------------------QIDEWLEYAPIFSLGSAFESACKY 120

Query: 121 ------------------SDVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDN 180
                             +D+AIWS LAGTG RWESLRKSKK+ NL RWFNS+  E+ D 
Sbjct: 121 VDDYLLGRTFLVTHSLTIADIAIWSLLAGTGLRWESLRKSKKYQNLVRWFNSIQTEHNDA 180

Query: 181 LDDVLTTYAGKRG-GKASGAKS---QIVSTTRHLIRGKLEANVPLK 194
           L DV TTY GKRG GK   AKS   Q+VS +   + G   A    K
Sbjct: 181 LSDVTTTYVGKRGVGKPVAAKSKENQVVSQSAKSVNGDTAAKAVSK 208

[Close]
BLAST of Cla97C01G010820 vs. Swiss-Prot
Match: sp|O82462|SYEC_ARATH (Glutamate--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At5g26710 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-34
Identity = 85/183 (46.45%), Postives = 119/183 (65.03%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MD   LSFP ++PP  VIVA  LS    + DSS A+ + P+F+F++G KL G +VLLRY+
Sbjct: 1   MDGMKLSFPPESPPLSVIVALSLSASPVTIDSSAAATTVPSFVFSDGRKLNGATVLLRYV 60

Query: 61  GR-VTNIPNFYGPNAYESSQANFLIINFSHIYAW------ILTQIDEWLEYAPIL----- 120
           GR    +P+FYG NA++SSQ +   ++++ +++          ++D++LE +  L     
Sbjct: 61  GRSAKKLPDFYGNNAFDSSQIDEW-VDYASVFSSGSEFENACGRVDKYLESSTFLVGHSL 120

Query: 121 -SSDVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDNLDDVLTTYAGKRGGKA 171
             +DVAIWS LAGTGQRWESLRKSKK+ +L RWFNS+L EY + L+ VL TY  K  GK 
Sbjct: 121 SIADVAIWSALAGTGQRWESLRKSKKYQSLVRWFNSILDEYSEVLNKVLATYVKKGSGKP 180

[Close]
BLAST of Cla97C01G010820 vs. TAIR10
Match: AT5G26710.1 (Glutamyl/glutaminyl-tRNA synthetase, class Ic)

HSP 1 Score: 148.3 bits (373), Expect = 5.7e-36
Identity = 85/183 (46.45%), Postives = 119/183 (65.03%), Query Frame = 0 

Query: 1   MDIKLLSFPADTPPFFVIVAAKLSGITFSEDSSLASGSAPTFLFTNGSKLYGTSVLLRYI 60
           MD   LSFP ++PP  VIVA  LS    + DSS A+ + P+F+F++G KL G +VLLRY+
Sbjct: 1   MDGMKLSFPPESPPLSVIVALSLSASPVTIDSSAAATTVPSFVFSDGRKLNGATVLLRYV 60

Query: 61  GR-VTNIPNFYGPNAYESSQANFLIINFSHIYAW------ILTQIDEWLEYAPIL----- 120
           GR    +P+FYG NA++SSQ +   ++++ +++          ++D++LE +  L     
Sbjct: 61  GRSAKKLPDFYGNNAFDSSQIDEW-VDYASVFSSGSEFENACGRVDKYLESSTFLVGHSL 120

Query: 121 -SSDVAIWSGLAGTGQRWESLRKSKKHINLQRWFNSLLVEYRDNLDDVLTTYAGKRGGKA 171
             +DVAIWS LAGTGQRWESLRKSKK+ +L RWFNS+L EY + L+ VL TY  K  GK 
Sbjct: 121 SIADVAIWSALAGTGQRWESLRKSKKYQSLVRWFNSILDEYSEVLNKVLATYVKKGSGKP 180

The following BLAST results are available for this feature:
BLAST of Cla97C01G010820 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961381.11.0e-6268.00glutamate--tRNA ligase, cytoplasmic-like [Cucurbita moschata] >XP_022961382.1 gl... [more]
XP_023521072.12.2e-6267.50glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo] >XP_023521... [more]
XP_022968862.18.5e-6267.00glutamate--tRNA ligase, cytoplasmic-like [Cucurbita maxima] >XP_022968864.1 glut... [more]
XP_004135579.14.4e-5864.00PREDICTED: glutamate--tRNA ligase, cytoplasmic [Cucumis sativus] >KGN66007.1 hyp... [more]
XP_008450490.14.4e-5863.50PREDICTED: glutamate--tRNA ligase, cytoplasmic [Cucumis melo][more]
BLAST of Cla97C01G010820 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BPD2|A0A1S3BPD2_CUCME2.9e-5863.50glutamate--tRNA ligase, cytoplasmic OS=Cucumis melo OX=3656 GN=LOC103492081 PE=3... [more]
tr|A0A0A0LYW4|A0A0A0LYW4_CUCSA2.9e-5864.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561380 PE=3 SV=1[more]
tr|A0A2I4DHL4|A0A2I4DHL4_9ROSI9.1e-4447.27glutamate--tRNA ligase, cytoplasmic OS=Juglans regia OX=51240 GN=LOC108980232 PE... [more]
tr|A0A218WIN0|A0A218WIN0_PUNGR2.0e-4350.47Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr018243 PE=3 SV=1[more]
tr|W9SWJ4|W9SWJ4_9ROSA2.6e-4347.79Putative glutamate--tRNA ligase OS=Morus notabilis OX=981085 GN=L484_021319 PE=3... [more]
BLAST of Cla97C01G010820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O82462|SYEC_ARATH1.0e-3446.45Glutamate--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At5g26710... [more]
BLAST of Cla97C01G010820 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G26710.15.7e-3646.45Glutamyl/glutaminyl-tRNA synthetase, class Ic[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006424 glutamyl-tRNA aminoacylation
biological_process GO:0006412 translation
biological_process GO:0043039 tRNA aminoacylation
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004818 glutamate-tRNA ligase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G010820.1Cla97C01G010820.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1050.130coord: 110..162
e-value: 4.4E-6
score: 28.6
coord: 3..109
e-value: 9.6E-6
score: 27.4
NoneNo IPR availablePANTHERPTHR43097FAMILY NOT NAMEDcoord: 1..179
NoneNo IPR availablePANTHERPTHR43097:SF8GLUTAMATE--TRNA LIGASE, CYTOPLASMICcoord: 1..179

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G010820Wax gourdwgowmbB460
Cla97C01G010820Watermelon (97103) v2wmbwmbB001
Cla97C01G010820Silver-seed gourdcarwmbB0048
Cla97C01G010820Silver-seed gourdcarwmbB0050
Cla97C01G010820Silver-seed gourdcarwmbB0425
Cla97C01G010820Silver-seed gourdcarwmbB0778
Cla97C01G010820Cucumber (Gy14) v2cgybwmbB008
Cla97C01G010820Cucumber (Gy14) v2cgybwmbB009
Cla97C01G010820Cucumber (Gy14) v1cgywmbB325
Cla97C01G010820Cucumber (Gy14) v1cgywmbB557
Cla97C01G010820Cucurbita maxima (Rimu)cmawmbB394
Cla97C01G010820Cucurbita maxima (Rimu)cmawmbB669
Cla97C01G010820Cucurbita moschata (Rifu)cmowmbB042
Cla97C01G010820Cucurbita moschata (Rifu)cmowmbB380
Cla97C01G010820Cucurbita moschata (Rifu)cmowmbB641
Cla97C01G010820Wild cucumber (PI 183967)cpiwmbB008
Cla97C01G010820Wild cucumber (PI 183967)cpiwmbB009
Cla97C01G010820Wild cucumber (PI 183967)cpiwmbB437
Cla97C01G010820Cucumber (Chinese Long) v3cucwmbB007
Cla97C01G010820Cucumber (Chinese Long) v3cucwmbB008
Cla97C01G010820Cucumber (Chinese Long) v3cucwmbB433
Cla97C01G010820Cucumber (Chinese Long) v2cuwmbB008
Cla97C01G010820Cucumber (Chinese Long) v2cuwmbB009
Cla97C01G010820Cucumber (Chinese Long) v2cuwmbB415
Cla97C01G010820Bottle gourd (USVL1VR-Ls)lsiwmbB113
Cla97C01G010820Bottle gourd (USVL1VR-Ls)lsiwmbB153
Cla97C01G010820Bottle gourd (USVL1VR-Ls)lsiwmbB159
Cla97C01G010820Melon (DHL92) v3.6.1medwmbB126
Cla97C01G010820Melon (DHL92) v3.6.1medwmbB134
Cla97C01G010820Melon (DHL92) v3.6.1medwmbB509
Cla97C01G010820Melon (DHL92) v3.5.1mewmbB138
Cla97C01G010820Melon (DHL92) v3.5.1mewmbB145
Cla97C01G010820Melon (DHL92) v3.5.1mewmbB517
Cla97C01G010820Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G010820Watermelon (Charleston Gray)wcgwmbB092
Cla97C01G010820Watermelon (97103) v1wmwmbB246
Cla97C01G010820Watermelon (97103) v1wmwmbB252