Cla97C01G010760 (gene) Watermelon (97103) v2

NameCla97C01G010760
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr01 : 16724452 .. 16726423 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATCTGAGCTCCTGTCCTACGAAAAGAGGCTAGAAGCTCAAAATTCACAAAGAAACGAAGTCACAAGCAAAAATCCATCTGTGAACATGGTTAATAGCAGAGGAGCTGGACCTCAACAACCACAAAATCCGACATCACAAAGCCATGGATGTGGCAGAAGTCAATACAGTGGGCAACACGGAGGAAATCAATTCGAAAATAGAGGACAAGGTATGAGTAGAAATCGACCAGCTTGTCAAGTTTGTGGGAATGTTAGTCACACTGCAGATGTGTGTTACAATCGATTCAACAAGGAATTCACTCCCAACTTCAATCAGAACAAAAATAGCGCCAGTAGCAACAACTTCAGAAACAACAATAGGAAACCTCTTACTGCCATGGTTGCCACACATAATGAAAATCCCTTCACTTCGAATTATGAAAGCACAGTCGATCAAAGTTGATATGCTGATAGTGGAGCAATAAATCATGTGACCTCCGACTACAACAATCTCACAAACTCGACTGAATATGAAGGTAATGAGTTGGTAACTGCTGGCAATGGTAATACATTGCAGATTGCTTCTATTGCTAATACGTTTTTGACTAATGGAAAGTATTCATTGAATTTGAATAATATACTGCATGTTCCTGATATTGCTAAAAATCTTGTTAGTGTATCTAAATTGGCCAAGGATAGTAACGCTTTCATTGAATTTCACAATAACTATTGTCTTGTAAAGGACAAGGGTTCGAGGCAAACAATTTTGAAGGGCATACTTAGAGATAGGTTGTATCATCTAGAAGAAGCTATTGTGAAACCTAGTGTTGTTCCGGTGAGACTTGCTGCTGCTTGTGAATCCAAGATGGTTGTGAATATAAATAAATCCAAGATGGTTGTATCTAAAACTACTTGGCATTGATGGTTGGGACACCCCTCCTTGAGAATTTTTGATTTAGTAACTAGAGGTTGTAATCTATAGTCTAATAGAGGTGCAACTGAGTTTTTTCACTCATGTCAGTTGGGTAAATCACATAGTATTCCATATTCGTTATCTGAATCTCGCGCTTCTAAAGCTTTTGATTTAATTCATACAAATGTGTGGGGTCTTGCACCTATGCTATCTTTTGTTGATATTATATACTATTTGTTGATGATTTTAGTCGCCATGTCTTGATTTACCCACTTCGGCTGAAAAGTGACACAATGGCAGCTTTCAAACATTTTGTGAAGTTGATAAAAACTCAGTTCAATAGTGGCATAAAAGCCATACAGTTCGATAATGGTAGTGAATATAAGAGAATCGATCAGATGTATAAAAACTCGGGAATAGTCACACAAATGTCATGCCCACACACCTCTGCTCAAAATGGCCGAGCCGAACGTAAGCATCGCCATGTTGTTGAAATGGGCCTAACTTTATTAGCCCAAGCATAATTGCCCCTAATGTTCTGGTGGGATGCTTTCCATACTGCAACTCAATTAATTAATGGTCTTCTCACATTGATTCTTCTAGGAAAATCTCCAATGGATGTTTTATCAAACAAGAAACTTGATTTTAATGCTCTCAGAACATTTGGATGTGCTTGTTATCCATGTTTAAGACCCTATCAAACTAAAAAATTTGATTTTCATAGAGAAAAGTGTGTCTACTTGGGGTCAAGCTCACACCACAAAGGGTTTAGTGCCTAAATTCTACCGAACGTGTGTTTATCTCCAAAAGTGTGACCTTTGATGAAGCTGACTTCCCCTTTTCAACCAAAATCGACCCAACTGAACGAACCACCAAAAATTCAGCCCGTCCTTCCCCACTAATGTTTCACCCTTTGCCTTCCATTACCACAACTAGCCCAGTCCAACAAAATGACTCATCCCACCTTTCCACACCAGATACCACCAACCCTGCAAATCGGCCACCCAAATCTAGCGAACTAGACCTTCCCAATCTCCAAGCCATACTCCACAAAATACACCACCAACCAGCCTAG

mRNA sequence

ATGCAATCTGAGCTCCTGTCCTACGAAAAGAGGCTAGAAGCTCAAAATTCACAAAGAAACGAAGTCACAAGCAAAAATCCATCTGTGAACATGGTTAATAGCAGAGGAGCTGGACCTCAACAACCACAAAATCCGACATCACAAAGCCATGGATGTGGCAGAAGTCAATACAGTGGGCAACACGGAGGAAATCAATTCGAAAATAGAGGACAAGATACCACCAACCCTGCAAATCGGCCACCCAAATCTAGCGAACTAGACCTTCCCAATCTCCAAGCCATACTCCACAAAATACACCACCAACCAGCCTAG

Coding sequence (CDS)

ATGCAATCTGAGCTCCTGTCCTACGAAAAGAGGCTAGAAGCTCAAAATTCACAAAGAAACGAAGTCACAAGCAAAAATCCATCTGTGAACATGGTTAATAGCAGAGGAGCTGGACCTCAACAACCACAAAATCCGACATCACAAAGCCATGGATGTGGCAGAAGTCAATACAGTGGGCAACACGGAGGAAATCAATTCGAAAATAGAGGACAAGATACCACCAACCCTGCAAATCGGCCACCCAAATCTAGCGAACTAGACCTTCCCAATCTCCAAGCCATACTCCACAAAATACACCACCAACCAGCCTAG

Protein sequence

MQSELLSYEKRLEAQNSQRNEVTSKNPSVNMVNSRGAGPQQPQNPTSQSHGCGRSQYSGQHGGNQFENRGQDTTNPANRPPKSSELDLPNLQAILHKIHHQPA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G010760.1Cla97C01G010760.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G010760ClCG01G011050Watermelon (Charleston Gray)wcgwmbB089
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G010760Watermelon (97103) v2wmbwmbB001
Cla97C01G010760Silver-seed gourdcarwmbB0050
Cla97C01G010760Silver-seed gourdcarwmbB0425
Cla97C01G010760Silver-seed gourdcarwmbB0778
Cla97C01G010760Cucumber (Gy14) v2cgybwmbB008
Cla97C01G010760Cucumber (Gy14) v2cgybwmbB009
Cla97C01G010760Cucumber (Gy14) v1cgywmbB325
Cla97C01G010760Cucumber (Gy14) v1cgywmbB557
Cla97C01G010760Cucurbita maxima (Rimu)cmawmbB394
Cla97C01G010760Cucurbita maxima (Rimu)cmawmbB669
Cla97C01G010760Cucurbita moschata (Rifu)cmowmbB042
Cla97C01G010760Cucurbita moschata (Rifu)cmowmbB380
Cla97C01G010760Cucurbita moschata (Rifu)cmowmbB641
Cla97C01G010760Wild cucumber (PI 183967)cpiwmbB008
Cla97C01G010760Wild cucumber (PI 183967)cpiwmbB009
Cla97C01G010760Wild cucumber (PI 183967)cpiwmbB437
Cla97C01G010760Cucumber (Chinese Long) v3cucwmbB007
Cla97C01G010760Cucumber (Chinese Long) v3cucwmbB008
Cla97C01G010760Cucumber (Chinese Long) v3cucwmbB433
Cla97C01G010760Cucumber (Chinese Long) v2cuwmbB008
Cla97C01G010760Cucumber (Chinese Long) v2cuwmbB009
Cla97C01G010760Cucumber (Chinese Long) v2cuwmbB415
Cla97C01G010760Bottle gourd (USVL1VR-Ls)lsiwmbB113
Cla97C01G010760Bottle gourd (USVL1VR-Ls)lsiwmbB153
Cla97C01G010760Bottle gourd (USVL1VR-Ls)lsiwmbB159
Cla97C01G010760Melon (DHL92) v3.6.1medwmbB126
Cla97C01G010760Melon (DHL92) v3.6.1medwmbB134
Cla97C01G010760Melon (DHL92) v3.6.1medwmbB509
Cla97C01G010760Melon (DHL92) v3.5.1mewmbB138
Cla97C01G010760Melon (DHL92) v3.5.1mewmbB145
Cla97C01G010760Melon (DHL92) v3.5.1mewmbB517
Cla97C01G010760Watermelon (Charleston Gray)wcgwmbB092
Cla97C01G010760Watermelon (97103) v1wmwmbB246
Cla97C01G010760Watermelon (97103) v1wmwmbB252
Cla97C01G010760Wax gourdwgowmbB460