Cla97C01G007840 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G007840
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	MATH domain-containing protein
Location	Cla97Chr01 : 7978346 .. 7979037 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACAAAGCGGAAACAGAAAGAGGTAAAAATGGAAGACCAAACCAACAATAATGTCGTCTTCTCTTCCGATTCTGCTTTCGGTATAACTTTTAACCTTTACATTTCTTCAAATTTTGAACAACTTTTCCAAACTTCATTCATTATTATACATTTCTACAATCATCTTTAATGCTTATTTTCATTACTTTCCAGTCGTTAGGTCCACCAGAGATGATAAACCACTCCATTTTACCCTCAAAATCCAATCTTTTTCCTTGCTGAAGGCTGCACTTGCTAACTCCAAGCGTGATAGATATGAATCCCATAGCTTCGATGCCGGCGGTTATAAATGGTGGGGTTTTAGGGGTGGAGTATATGTTATCGTTAAATCACTAATCAACCTTAAAACCTTAAACTAATGGGCTATGGTATCACAGCAGGATCCTGTATTCAAACCTCGTTAATGTCATTTCCTTATCCAATCCTTTAATAAATGGCTTTTGGGTCCACTGTCACTATTTTGGTTGTTGTTGTTGTAGGAGATTAGCTCTGTATCCTAATGGAGATGTGAAAAGGAATGGGTCTGCTCATATCTCACTCTATTTGGTATCTGCTGATGATAATATTTTATCTACTAATTCAGAGGTCAATGTTGTGTTTACATTTCTAGTTTATGATATTCTCAAAGAATTTGACTGTCCAAGGTAA

mRNA sequence

ATGGGGACAAAGCGGAAACAGAAAGAGGTAAAAATGGAAGACCAAACCAACAATAATGTCGTCTTCTCTTCCGATTCTGCTTTCGTCGTTAGGTCCACCAGAGATGATAAACCACTCCATTTTACCCTCAAAATCCAATCTTTTTCCTTGCTGAAGGCTGCACTTGCTAACTCCAAGCGTGATAGATATGAATCCCATAGCTTCGATGCCGGCGGTTATAAATGGAGATTAGCTCTGTATCCTAATGGAGATGTGAAAAGGAATGGGTCTGCTCATATCTCACTCTATTTGGTATCTGCTGATGATAATATTTTATCTACTAATTCAGAGGTCAATGTTGTGTTTACATTTCTAGTTTATGATATTCTCAAAGAATTTGACTGTCCAAGGTAA

Coding sequence (CDS)

ATGGGGACAAAGCGGAAACAGAAAGAGGTAAAAATGGAAGACCAAACCAACAATAATGTCGTCTTCTCTTCCGATTCTGCTTTCGTCGTTAGGTCCACCAGAGATGATAAACCACTCCATTTTACCCTCAAAATCCAATCTTTTTCCTTGCTGAAGGCTGCACTTGCTAACTCCAAGCGTGATAGATATGAATCCCATAGCTTCGATGCCGGCGGTTATAAATGGAGATTAGCTCTGTATCCTAATGGAGATGTGAAAAGGAATGGGTCTGCTCATATCTCACTCTATTTGGTATCTGCTGATGATAATATTTTATCTACTAATTCAGAGGTCAATGTTGTGTTTACATTTCTAGTTTATGATATTCTCAAAGAATTTGACTGTCCAAGGTAA

Protein sequence

MGTKRKQKEVKMEDQTNNNVVFSSDSAFVVRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGYKWRLALYPNGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYDILKEFDCPR

Homology

[Close]

BLAST of Cla97C01G007840 vs. NCBI nr
Match: XP_022146383.1 (uncharacterized protein LOC111015611 [Momordica charantia])

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 74/124 (59.68%), Postives = 94/124 (75.81%), Query Frame = 0


Query: 2   GTKRKQKEVKMEDQTNNNVVFSSDSAFVVRSTRDDKPLHFTLKIQSFSLLKAALANSKRD 61
           G  R Q ++  ++ T  +    ++S  V+RS RD+KPLH+TLKI+SFSLLK ALA+SKRD
Sbjct: 6   GLNRNQAKMGNKNTTFLSPTTDAESPLVLRSIRDEKPLHYTLKIKSFSLLKKALASSKRD 65

Query: 62  RYESHSFDAGGYKWRLALYPNGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYD 121
           R+ S  F A GYKW+LALYPNGD  RNGS +ISLYLV+A+D I+S  SEVNVV TFLVYD
Sbjct: 66  RFVSQIFHASGYKWKLALYPNGDKNRNGSGYISLYLVTAEDEIVSATSEVNVVLTFLVYD 125

Query: 122 ILKE 126
            L++
Sbjct: 126 SLRD 129

[Close]

BLAST of Cla97C01G007840 vs. NCBI nr
Match: XP_022146381.1 (ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia])

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 78/112 (69.64%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 15  QTNNNVVFSSDSAFVVRS-TRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGY 74
           Q NN +  SS++A  V S TRD+KPLH+TL+IQSFSLLK ALA S  DRYES  F+AGGY
Sbjct: 2   QRNNTISPSSEAADSVLSFTRDEKPLHYTLQIQSFSLLKTALAASNCDRYESQIFNAGGY 61

Query: 75  KWRLALYPNGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYDILKE 126
           KW+LA+YPNGDVKRNGS HISLYLV A+D I    SEVNVVFTFLVYD L +
Sbjct: 62  KWKLAVYPNGDVKRNGSDHISLYLVKAEDGI--PTSEVNVVFTFLVYDNLND 111

[Close]

BLAST of Cla97C01G007840 vs. NCBI nr
Match: XP_022146379.1 (ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia])

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-30
Identity = 76/116 (65.52%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 19  NVVFSSDSA--------FVVRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDA 78
           N++F S S+         V+RSTRD+KPLH+TL+IQSFSLLK AL  S  DRYES  F+A
Sbjct: 5   NIIFHSLSSEADTDSGCVVIRSTRDEKPLHYTLQIQSFSLLKTALVRSDCDRYESRIFNA 64

Query: 79  GGYKWRLALYPNGDVKRNGS-AHISLYLVSADDNILSTNSEVNVVFTFLVYDILKE 126
           GGYKW+LA+YP GDVKRNGS  HISLYLV A+D+I    SEVNVVFTFLVYD LK+
Sbjct: 65  GGYKWKLAMYPTGDVKRNGSHDHISLYLVKAEDDI--PTSEVNVVFTFLVYDSLKD 118

[Close]

BLAST of Cla97C01G007840 vs. NCBI nr
Match: KGN51088.1 (hypothetical protein Csa_5G432550 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28
Identity = 72/121 (59.50%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 4   KRKQKEVKMEDQTNNNVVFSSDSAFVVRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRY 63
           +RK K + +  +++ +    S SA VV S+R +KP+H+ LKIQSFSLLK  LA S R R+
Sbjct: 5   RRKNKNINVFPKSHGH--DDSASASVVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRF 64

Query: 64  ESHSFDAGGYKWRLALYPNGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYDIL 123
           ES  F+AGGY+W+LALYPNGD +R+ S HISLYLV   DNILST SEVN VFTFLVYD L
Sbjct: 65  ESQKFNAGGYEWKLALYPNGDQRRDVSDHISLYLVMVGDNILSTTSEVNAVFTFLVYDTL 123

Query: 124 K 125
           +
Sbjct: 125 R 123

[Close]

BLAST of Cla97C01G007840 vs. NCBI nr
Match: XP_011656221.1 (PREDICTED: uncharacterized protein LOC105435677 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28
Identity = 72/121 (59.50%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 4   KRKQKEVKMEDQTNNNVVFSSDSAFVVRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRY 63
           +RK K + +  +++ +    S SA VV S+R +KP+H+ LKIQSFSLLK  LA S R R+
Sbjct: 5   RRKNKNINVFPKSHGH--DDSASASVVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRF 64

Query: 64  ESHSFDAGGYKWRLALYPNGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYDIL 123
           ES  F+AGGY+W+LALYPNGD +R+ S HISLYLV   DNILST SEVN VFTFLVYD L
Sbjct: 65  ESQKFNAGGYEWKLALYPNGDQRRDVSDHISLYLVMVGDNILSTTSEVNAVFTFLVYDTL 123

Query: 124 K 125
           +
Sbjct: 125 R 123

[Close]

BLAST of Cla97C01G007840 vs. TrEMBL
Match: tr|A0A0A0KND8|A0A0A0KND8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 72/121 (59.50%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 4   KRKQKEVKMEDQTNNNVVFSSDSAFVVRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRY 63
           +RK K + +  +++ +    S SA VV S+R +KP+H+ LKIQSFSLLK  LA S R R+
Sbjct: 5   RRKNKNINVFPKSHGH--DDSASASVVTSSRYEKPVHYILKIQSFSLLKEGLACSPRQRF 64

Query: 64  ESHSFDAGGYKWRLALYPNGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYDIL 123
           ES  F+AGGY+W+LALYPNGD +R+ S HISLYLV   DNILST SEVN VFTFLVYD L
Sbjct: 65  ESQKFNAGGYEWKLALYPNGDQRRDVSDHISLYLVMVGDNILSTTSEVNAVFTFLVYDTL 123

Query: 124 K 125
           +
Sbjct: 125 R 123

[Close]

BLAST of Cla97C01G007840 vs. TrEMBL
Match: tr|A0A1S3CQ20|A0A1S3CQ20_CUCME (uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-26
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 30  VRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGYKWRLALYPNGDVKRNG 89
           V STR +KP+H+ LKIQSFSLLK A+A+S   R+ES  F AGG +W+LALYPNGD +R+ 
Sbjct: 33  VTSTRYEKPIHYILKIQSFSLLKEAVASSPCQRFESQKFYAGGSEWKLALYPNGDRRRDV 92

Query: 90  SAHISLYLVSADDNILSTNSEVNVVFTFLVYDILK 125
           S HISLYLV  ++NILST SEVNVVFTFLVYD L+
Sbjct: 93  SDHISLYLVRVENNILSTTSEVNVVFTFLVYDTLR 127

[Close]

BLAST of Cla97C01G007840 vs. TrEMBL
Match: tr|A0A2K1X3D9|A0A2K1X3D9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G049100v3 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.4e-19
Identity = 50/96 (52.08%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 30  VRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGYKWRLALYPNGDVKRNG 89
           VR  R   P H+++KI SFSLL   +ANS  ++YES  FDA GYKW+L LYPNGD  RNG
Sbjct: 7   VREERHVAPAHYSMKIDSFSLLSDMVANSYLEQYESREFDASGYKWKLVLYPNGDKSRNG 66

Query: 90  SAHISLYLVSADDNILSTNSEVNVVFTFLVYDILKE 126
             +ISLYLV AD        E+N +F   VYD L++
Sbjct: 67  DGYISLYLVIADTTGFPPGWEINAIFKLFVYDQLQD 102

[Close]

BLAST of Cla97C01G007840 vs. TrEMBL
Match: tr|A9PEN0|A9PEN0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G103200v3 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.9e-19
Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 25  DSAFVVRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGYKWRLALYPNGD 84
           D A + RSTRD  P H+T KI++FSL    LAN+K D +ES  F+ G YKWRL LYPNG+
Sbjct: 16  DLAEITRSTRDLPPAHYTFKIENFSL----LANAKIDNFESGDFEVGSYKWRLRLYPNGN 75

Query: 85  VKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYDILKE 126
            K NG  HISLYL  ++ N L    EVNV F   VY+ +++
Sbjct: 76  KKNNGDGHISLYLAFSNSNALPFGWEVNVNFRLFVYNQIQD 112

[Close]

BLAST of Cla97C01G007840 vs. TrEMBL
Match: tr|A0A2K1X3E9|A0A2K1X3E9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G049700v3 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.9e-19
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 0


Query: 1   MGTKRKQKEVKMEDQTNNNVVFSSDSAFVVRSTRDDKPLHFTLKIQSFSLLKAALANSKR 60
           MG +  +KE+  E++     V    +   VR  R   P H+++ I SFSLL   +ANS  
Sbjct: 2   MGGEMMKKELTEEEKGAMEEV----AIDTVREERHVAPAHYSMTIDSFSLLSDMVANSYL 61

Query: 61  DRYESHSFDAGGYKWRLALYPNGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVY 120
           ++YES  F+A GYKW+L LYPNGD  RNG  +ISLYLV AD  +     E+N +F   VY
Sbjct: 62  EQYESREFEASGYKWKLVLYPNGDKSRNGDGYISLYLVMADTTVFPAGWEINAIFKLFVY 121

Query: 121 DILKE 126
           D L++
Sbjct: 122 DQLQD 122

[Close]

BLAST of Cla97C01G007840 vs. TAIR10
Match: AT3G17380.1 (TRAF-like family protein)

HSP 1 Score: 87.0 bits (214), Expect = 9.1e-18
Identity = 47/104 (45.19%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 23  SSDSAFVVRSTRDDKPLHFTLKIQSFSLL-KAALANSKRDRYESHSFDAGGYKWRLALYP 82
           S D   +++S  D  P H+ +KI+SFSLL K A+     +RYE+ SF+AGGYKW+L LYP
Sbjct: 4   SGDYDEIIKSISDAPPTHYMVKIESFSLLTKHAI-----ERYETESFEAGGYKWKLVLYP 63

Query: 83  NGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYDILKE 126
           NG+  +N   H+S+YL  AD + LS   EV  VF   + D  K+
Sbjct: 64  NGNKSKNTKDHVSVYLSLADSSSLSPGWEVYAVFRLYLLDQNKD 102

[Close]

BLAST of Cla97C01G007840 vs. TAIR10
Match: AT5G26290.1 (TRAF-like family protein)

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-13
Identity = 43/107 (40.19%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 15  QTNNNVVFSSDSAFVVRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGYK 74
           Q N    FS  +  V R  RDD+P    L I SFS+++     ++ + YES  F+A GYK
Sbjct: 29  QRNRIQQFSQFTNGVTRVWRDDRPSDKILSITSFSIIR-----TRPEPYESSVFEAVGYK 88

Query: 75  WRLALYPNGDVKRNGSAHISLYLVSADDNILSTNSEVNVVFTFLVYD 122
           WRL LY NG+ K  G  H+SLY    +   L    EVNV     VY+
Sbjct: 89  WRLVLYVNGNEKDGGKDHVSLYAKIVETESLPVGWEVNVDLKLFVYN 130

[Close]

BLAST of Cla97C01G007840 vs. TAIR10
Match: AT2G04170.1 (TRAF-like family protein)

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-12
Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 34  RDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGYKWRLALYPNGDVKRNGSAHI 93
           RD++P +  L I SFS++K      + + YES  F+AGGYKWRL LY NG+    G+ HI
Sbjct: 125 RDERPSNKILTITSFSVIK-----GRGEPYESSVFEAGGYKWRLVLYVNGNQNDGGNNHI 184

Query: 94  SLYLVSADDNILSTNSEVNVVFTFLVYD 122
           SLY+   +   L    EVNV     VY+
Sbjct: 185 SLYVRIEETESLPKGWEVNVELKLFVYN 207

[Close]

BLAST of Cla97C01G007840 vs. TAIR10
Match: AT3G20360.1 (TRAF-like family protein)

HSP 1 Score: 68.2 bits (165), Expect = 4.4e-12
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 30  VRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGYKWRLALYPNGDVKRNG 89
           V+  R+  P  ++LK++SF+ L  ++     +RYES  F  G Y W L +YP G+   NG
Sbjct: 58  VKGLRERPPSSYSLKMESFNTLMKSVYT---ERYESRPFRVGRYNWTLVVYPKGNKNDNG 117

Query: 90  SAHISLYLVSADDNILSTNSEVNVVFTFLVYD 122
           + HISLY+V  +  + S + EV+V   F V++
Sbjct: 118 TGHISLYVVLDNSTLTSQSEEVHVDLRFYVFN 146

[Close]

BLAST of Cla97C01G007840 vs. TAIR10
Match: AT5G26280.1 (TRAF-like family protein)

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-11
Identity = 37/93 (39.78%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 29  VVRSTRDDKPLHFTLKIQSFSLLKAALANSKRDRYESHSFDAGGYKWRLALYPNGDVKRN 88
           V R  R+++P    + I SFS++K      + + YES  F+A GYKWRL LY NG+    
Sbjct: 50  VTRELREERPSSKIVTITSFSVIK-----GRGEPYESSVFEAAGYKWRLVLYVNGNKNDG 109

Query: 89  GSAHISLYLVSADDNILSTNSEVNVVFTFLVYD 122
           G+ HISLY    + N L    EVNV     V++
Sbjct: 110 GNDHISLYARIEETNSLPLGWEVNVDLKLFVHN 137

The following BLAST results are available for this feature:

BLAST of Cla97C01G007840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146383.1	1.2e-31	59.68	uncharacterized protein LOC111015611 [Momordica charantia]	[more]
XP_022146381.1	2.0e-31	69.64	ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia]	[more]
XP_022146379.1	2.9e-30	65.52	ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]	[more]
KGN51088.1	1.6e-28	59.50	hypothetical protein Csa_5G432550 [Cucumis sativus]	[more]
XP_011656221.1	1.6e-28	59.50	PREDICTED: uncharacterized protein LOC105435677 [Cucumis sativus]	[more]

BLAST of Cla97C01G007840 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KND8\|A0A0A0KND8_CUCSA	1.1e-28	59.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G432550 PE=4 SV=1	[more]
tr\|A0A1S3CQ20\|A0A1S3CQ20_CUCME	2.2e-26	67.37	uncharacterized protein LOC103503506 OS=Cucumis melo OX=3656 GN=LOC103503506 PE=...	[more]
tr\|A0A2K1X3D9\|A0A2K1X3D9_POPTR	3.4e-19	52.08	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G049100v3 PE=...	[more]
tr\|A9PEN0\|A9PEN0_POPTR	9.9e-19	51.49	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G103200v3 PE=...	[more]
tr\|A0A2K1X3E9\|A0A2K1X3E9_POPTR	9.9e-19	43.20	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G049700v3 PE=...	[more]

BLAST of Cla97C01G007840 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C01G007840 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17380.1	9.1e-18	45.19	TRAF-like family protein	[more]
AT5G26290.1	6.7e-13	40.19	TRAF-like family protein	[more]
AT2G04170.1	2.6e-12	43.18	TRAF-like family protein	[more]
AT3G20360.1	4.4e-12	36.96	TRAF-like family protein	[more]
AT5G26280.1	2.8e-11	39.78	TRAF-like family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR008974	TRAF-like
IPR002083	MATH/TRAF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G007840.1	Cla97C01G007840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002083	MATH/TRAF domain	PFAM	PF00917	MATH	coord: 59..119 e-value: 1.3E-5 score: 25.2
IPR002083	MATH/TRAF domain	PROSITE	PS50144	MATH	coord: 38..130 score: 16.377
IPR002083	MATH/TRAF domain	CDD	cd00121	MATH	coord: 39..121 e-value: 2.48554E-14 score: 63.9374
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 24..127 e-value: 1.1E-18 score: 69.5
IPR008974	TRAF-like	SUPERFAMILY	SSF49599	TRAF domain-like	coord: 40..122
None	No IPR available	PANTHER	PTHR26379:SF213	F16G16.5-RELATED	coord: 19..121
None	No IPR available	PANTHER	PTHR26379	FAMILY NOT NAMED	coord: 19..121

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G007840	Lsi09G007930	Bottle gourd (USVL1VR-Ls)	lsiwmbB007

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G007840	Silver-seed gourd	carwmbB0501
Cla97C01G007840	Silver-seed gourd	carwmbB0858
Cla97C01G007840	Cucumber (Gy14) v2	cgybwmbB321
Cla97C01G007840	Cucumber (Gy14) v1	cgywmbB571
Cla97C01G007840	Cucurbita maxima (Rimu)	cmawmbB289
Cla97C01G007840	Cucurbita maxima (Rimu)	cmawmbB705
Cla97C01G007840	Cucurbita moschata (Rifu)	cmowmbB271
Cla97C01G007840	Cucurbita moschata (Rifu)	cmowmbB676
Cla97C01G007840	Wild cucumber (PI 183967)	cpiwmbB351
Cla97C01G007840	Cucumber (Chinese Long) v3	cucwmbB353
Cla97C01G007840	Cucumber (Chinese Long) v2	cuwmbB338
Cla97C01G007840	Melon (DHL92) v3.6.1	medwmbB008
Cla97C01G007840	Melon (DHL92) v3.5.1	mewmbB009
Cla97C01G007840	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G007840	Watermelon (97103) v1	wmwmbB236
Cla97C01G007840	Wax gourd	wgowmbB054
Cla97C01G007840	Wax gourd	wgowmbB063